KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116828118
Entry
116828118         CDS       T07367                                 
Symbol
KDM3B
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cabi03036]
    116828118 (KDM3B)
Enzymes [BR:cabi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     116828118 (KDM3B)
Chromosome and associated proteins [BR:cabi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116828118 (KDM3B)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2 C1_2
Other DBs
NCBI-GeneID: 116828118
NCBI-ProteinID: XP_032642019
Ensembl: ENSCABG00000012820
UniProt: A0A8C0H230
LinkDB
Position
Unknown
AA seq 1746 aa
MADAAASPVGKRLLLLLAASPGEAEAVGLEPGPALPSRAWRSGTVRAMSGAVPQDLAIFV
EFDGCNWKQHAWVKVHAEEVIVLLLEGSLVWAPRSDPILLQGTQISLAQWPALTFTPLVD
KLGLGSVVPVEFLLDRDLRFLSDASGLCLFQMGTESQNQVLQEQSELRDSVNALISDQKL
QEIFSRGPYSVQGQRVKVYQPEDENSWLCGVVTCQDPITRLMEVSMTETGEIKSVDPRLV
HVVMDSSVPPNEGGGLKAAKSSKGKKKRESMEGKDGRRRKNASDSGCDPATKKLKERGEV
DSNGSDGSEASRPPWKAGTGSETGLDARAKQLPSFVPQINRNIRFATYTKENGRTLVVQD
EPVVGDTPVPFTPFSSAASQALLVGAGCKETGKSLEQVGQSMGASPAAVTTAALTPATVR
ISDTGMSAVTGQEKQKTGWSQAQGENSRNSLLTSSGFGASLPTASQSLAFGDGRSQSNGV
LSPPNKPVGFPFGCSTGQETQKDSDLSKNLFFQCMSQNLPSSNYFTVISESLAEEPSSRD
SFMQSADSLSSGICKSKSLLAADTKPAATSGSSVDRKLPLESMPTLTPAFSRSLLNTRPA
DNHENLFLQPPKLSREEPSNPFLAFAEKAELSPFSSFASSSQTVSIPPSAMGLKAASSWP
ESHTSTDSSSLAKKKTLFITTDSSKMVSNAPSSTAVAGVQSPSTVGNGRSSSPTGSLTQP
IEMPTLSSSPTEEKPSVGPGQQDNPLLKTFSNVFGRHPPGFFSSQAEFAQENKAPFEAVK
RFSLDERSMTSRQDSDSSTNSDLSDLSDSEEQLQAKACLKGIPEHLIGKLGPSGERNAEL
LLGKGKGKQAPKGRPRTAPLKVDQSVLKDMSKVRKLKQSGEPFLQDGSCINVAPHLHKCR
ECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGILRVEGFLNPQQSDPDAMSLWIPS
SSPAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCE
TTLFNIHWVCRKCGFGVCLDCYRLRKNRPRSETEEIGDEEVFSWLKCAKGQSHEPENLMP
TQIIPGTALYNIGDMVHAARGKWGIKANCPCINRQNKSVLRPAVTNGMSQLPSINPGASA
SGSEGTFSSGAGAVGLGQLEMDADPKPEATDGRTEESAKTETSPLSNPTETKSSRPLCPE
TSPSSALHWLADLATQKAKEETKEAGSLRSVLNKESHSPFGLDSFNSSTKVSPLTPKLFN
SLLLGPVASSNKAEGSSLRDLLHSGPGKLPQVPLDTGIPFPPVFSAASTGAKSKASLPNF
LDHIIASVVENKKTSDAAKRASNLADTQREVKEMVMGLNVLDPHTSHSWLCDGRLLCLHD
PSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSLEFGDQDVDLVNCRNCAIIS
DVKVRDFWDGFEIISKRLRSDDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYT
KRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGI
PIGEGSHDDEVLKTIDEGDADDVTKQRIHEGKEKPGALWHIYAAKDAEKIRELLRKVGDE
QGQENPPDHDPIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLY
SCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHE
SKLARS
NT seq 5241 nt   +upstreamnt  +downstreamnt
atggcggatgcggcggcttccccagtggggaagcggctcctgctgctcctggcggccagt
cccggcgaggctgaagcggtggggctggagccggggcctgccctgccctctcgggcttgg
cggagcggcaccgtgcgagccatgagcggagcggtgccccaggacctggcgatctttgtg
gagtttgatggctgcaactggaagcaacatgcctgggtgaaagttcatgctgaagaggtc
atagtgttgttgctggaagggtcactggtatgggctcctcgaagtgatcccattctactt
cagggaactcagatctcacttgcacagtggcctgcactgaccttcactcccttagtagat
aagctgggtttaggctctgtggttcctgtggagtttcttctggatcgagacctgagattc
ctgtctgatgccagtggattatgtctatttcagatgggaacagagagccagaaccaagtt
ctgcaggagcaatctgaactgagagactcggtcaatgcattaattagtgaccagaaactt
caggaaatatttagcagaggtccctacagtgtccaaggccaaagagttaaggtataccaa
ccagaggatgaaaatagctggctctgtggtgttgtgacctgtcaagaccccatcacacgt
cttatggaagtgtccatgactgagactggtgagataaagtcagtggatccccgactggtt
catgtagtgatggacagttctgttccaccaaatgagggagggggcctaaaagcagctaaa
tcttcgaaagggaaaaagaagagagagagtatggaaggaaaggatggacgaaggaggaaa
aatgcttcagactctggatgtgatcctgcaacaaagaagctaaaagagaggggtgaagtg
gatagtaatgggagtgatggaagtgaggcaagcaggcctccttggaaagcaggcactggg
agtgaaacagggctggatgcaagggccaagcagctgccttcttttgttcctcagattaat
cgcaatattcgctttgccacttacaccaaagagaatggccgaactttagtggtgcaggat
gagccagtggttggtgacactcctgtacccttcactcctttttcttcagctgctagtcaa
gcactgctggttggagctggatgtaaagagacaggaaaatcactggaacaggttggccaa
agtatgggggcttctccagcagctgttactacagctgctttgacaccagcaactgtgagg
atctctgacactggcatgtcagcagttactgggcaagagaaacagaaaacaggctggtca
caagctcagggagagaattcccgaaattcacttctgacctcttctggatttggagcatct
ctcccaactgcatcccagtctttagcatttggtgatggaagaagccaatcaaatggagta
ttgtctccaccaaacaagcctgttgggtttccgtttggttgtagcactgggcaagagact
cagaaagactctgatctatcaaagaacttattttttcagtgcatgtcccagaatctgccc
tccagtaactatttcacggtcatctcagagagtttggctgaagagccctctagtcgggac
tcattcatgcagagtgcagacagtctgagctctgggatctgtaaaagtaaatctcttctt
gcagcagacactaaacccgcagccacgtctggcagttctgtggaccggaagctgcccttg
gagtctatgcccaccctcactccagccttttcacgaagcctcttgaatactcgacctgca
gataatcatgaaaatctatttttacagcccccaaaactgtcccgagaagagccctccaat
cctttcctggcatttgctgagaaagcagaactcagtcctttcagcagctttgcatcttca
tctcagaccgtatctatacccccttcagctatgggtctaaaggctgcctctagctggcca
gaatcacacacctcaacagactcctcttctctagctaagaagaaaaccttgtttataaca
acagattcctccaagatggtttctaatgctcctagttcaactgctgttgctggtgttcag
agcccatccactgtggggaatggccgttccagctcacccactggcagcctgacacaacct
attgagatgcccacgctctcctccagcccaacagaagaaaagccatctgttgggcctggg
cagcaagacaatcctctcctgaaaactttttctaatgtgtttggcaggcacccacctggc
tttttctcttcacaggcagagtttgcccaggagaataaagccccctttgaagctgtgaaa
aggttctctttagacgagcggagcatgacatccagacaggactcagattctagtaccaac
agtgacctgtcagacttgagtgattctgaggagcagctacaggccaaagcttgtctaaag
ggaatcccagagcatctgattggcaagcttggccccagtggagagcggaatgctgagctg
ctgctgggaaaagggaaagggaagcaggccccaaagggccggcctcgcacggcccctctg
aaagttgaccagtctgtgctgaaagacatgagtaaggtcaggaagctgaagcagtcagga
gagcctttcctccaggatggatcttgtatcaatgtagcccctcatctgcacaagtgtcgg
gagtgtcgtctggagcggtaccgcaagtttaaggagcaggagcaggatgactcaactgtg
gcctgtcgcttcttccattttcggagactgatatttactcggaaaggtatcctacgagtg
gaaggattcttaaatccccagcagagtgaccctgatgccatgagcctgtggattccatca
tcttcccctgcagagggtattgacctggagacctctaaatatatcctggccaatgttggg
gaccagttctgccaacttgttatgtctgagaaggaggcaatgatgatggtggagccacac
cagaaagtagcctggaagcgagctgtccgtggtgtgagggagatgtgcgatgtatgtgag
acaaccctcttcaatattcattgggtttgtcgcaaatgtggttttggagtctgtctggac
tgttatcggctgaggaagaaccgtccacgtagcgaaacagaggagattggtgacgaggag
gttttctcatggttgaagtgtgcaaaggggcagtcccatgaaccggagaatcttatgcca
acacagatcatccctggaacagccctttacaatataggagacatggtgcatgcagccaga
ggcaaatggggaattaaagccaactgtccatgtattaaccgacaaaacaaatctgtgttg
agacctgctgtcacaaatgggatgtcacagcttcccagtataaatcctggtgcatcagcc
tctggaagtgagggcaccttctccagtggggcaggggcagtaggattggggcagctagaa
atggacgctgatcctaaacctgaggccacagatggaagaactgaggagtctgcgaaaaca
gagacctcaccactgagcaaccccactgaaacaaaatctagcaggccactgtgtccagaa
acatccccctcatcagccttgcactggcttgcagatttagcaacacaaaaagcaaaagaa
gaaacaaaagaagctggatccctgagatcggtgctcaataaagaatcccattcaccgttt
ggattggattccttcaactccagtacaaaggtttctccattaacccccaaactgtttaat
agtctcttgttgggcccagttgcatctagtaacaaagctgaaggctccagtctcagagat
ctgctacactctgggccaggaaagctgccccaggtcccactagatacaggaattcctttt
cctccagtcttttctgcagcttccacgggggccaagagcaaagccagtctgcccaacttc
ctggatcatataattgcttctgtggtggagaataagaagacatctgatgctgcaaaacga
gcaagtaacttggctgatacgcagagagaggtgaaggaaatggtaatgggattaaatgtg
ctggatccacacacctcccattcctggctctgtgatggaaggctcttgtgtcttcatgac
cctagcaacaaaaacaactggaagatcttcagggagtgttggaaacagggccagcctgtg
ctggtctctggagtccataagaagctgaagtcagagctctggaaaccagaggccttcagc
ctagaatttggagaccaggatgttgatctggtgaactgcaggaactgcgccataatttca
gatgtgaaagtgcgtgacttctgggatggctttgaaatcatttccaagcgtctgagatca
gatgatgggcagccaatggtactgaaactaaaggactggcctccaggggaggattttaga
gacatgatgcctacgaggtttgaggatttgatggaaaacctcccactcccagagtatacc
aagagagatggcagactgaatcttgcctctagactgccaagttactttgtacggcctgat
ctgggtcccaaaatgtacaacgcatatgggttaataactgcagaagacaggcgagttggt
acaaccaatctccatttggatgtgtctgatgctgttaatgtcatggtgtatgttggtatc
cccattggggaaggatcccatgatgatgaagtactgaaaacaattgatgagggagatgct
gatgacgtgacaaagcagcgaatccatgaagggaaagagaagcctggagcgctgtggcac
atctatgctgccaaggatgctgagaagatccgggaacttctccgaaaggttggagacgaa
caaggccaagaaaaccccccggatcatgatccaattcatgaccaaagttggtacctggac
cagaccctacgtaagcgtctttatgaggagtatggagtacaaggctgggcaatagtgcag
ttcctaggagatgctgtgtttattcctgcaggtgccccccaccaggttcataatctgtac
agttgcattaaagtggcagaagattttgtatctccagaacatgtaaagcactgcttccgc
ctgacccaggaattcaggcacctatctaacactcacacaaaccatgaggataaactgcag
gtgaagaacattatctaccatgcagtaaaagatgctgttggcacactgaaggctcatgaa
tccaaattggctaggtcttaa

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