KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116828217
Entry
116828217         CDS       T07367                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cabi03041]
    116828217 (SMU1)
Spliceosome [BR:cabi03041]
 Complex B
  Other components
   Complex B specific factors
    116828217 (SMU1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML WD40_Gbeta Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_VPS8 WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_BBS7 RMC1_N Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_RSE1_2nd TFIIIC_delta DUF7165 VPS8_N Beta-prop_NOL10_N PROPPIN Beta-prop_ELP1_2nd
Other DBs
NCBI-GeneID: 116828217
NCBI-ProteinID: XP_032642164
Ensembl: ENSCABG00000013208
LinkDB
Position
Unknown
AA seq 357 aa
SLTILYLASHKALKWQQHQGLLPPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSH
VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDT
EMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGL
KSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGT
DITVNSVVLLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEW
IYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1076 nt   +upstreamnt  +downstreamnt
gatctctaactatactctatttggcttctcataaggcactgaaatggcagcagcaccagg
gactgcttcctccagggatgacaattgatttgttcagaggtaaagcagccgtgaaagatg
tagaagaagaaaagttccccacacagctgagcagacacattaagtttggccagaagtcac
acgtggaatgtgctaggttttctccagatggtcaatatcttgtaacaggctctgtggatg
gattcattgaagtgtggaatttcactactggaaagatcaggaaggatctgaaataccaag
cacaagataattttatgatgatggatgatgcagttctgtgcatgtgtttcagtagagaca
cagaaatgttagcaactggagcacaagatgggaagatcaaggtgtggaagattcagagtg
ggcaatgtctgaggagatttgaacgagctcacagtaaaggtgtcacctgcctcagtttct
ctaaagacagcagtcagattcttagtgcttcttttgatcagacaatcaggattcatggct
taaaatcgggaaaaactctgaaggaattccgtggtcattcttcatttgttaatgaagcta
cttttacacaggatggtcactatattatcagtgcgtcctctgatggcacagtgaagattt
ggaatatgaagacaactgagtgctccaacaccttcaaatctcttggcagcactgcaggaa
cggacatcaccgtgaatagcgtggttctgctgcctaaaaatccagaacactttgttgttt
gcaacagatcaaacacagtggtcatcatgaacatgcaaggacaaattgtaagaagcttca
gctctggtaagagagaaggaggtgactttgtttgctgtgccctttcaccacgtggcgaat
ggatctactgtgtgggtgaagactttgtgctgtactgtttcagcacagtgactggcaagc
tggagagaactctgacagttcatgaaaaggatgtaattggcatcgctcatcatccccatc
agaacttgatcgccacctacagtgaagacggcctcttgaaactctggaaaccttaa

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