Chelonoidis abingdonii (Abingdon island giant tortoise): 116828385
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Entry
116828385 CDS
T07367
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03022
Basal transcription factors
cabi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116828385 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
116828385 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116828385 (ERCC3)
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116828385 (ERCC3)
Enzymes [BR:
cabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116828385 (ERCC3)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116828385 (ERCC3)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116828385 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
DUF2605
Motif
Other DBs
NCBI-GeneID:
116828385
NCBI-ProteinID:
XP_032642442
Ensembl:
ENSCABG00000003231
UniProt:
A0A8C0GA74
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MLLKADHSSRPLWVAPDGHVFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSLY
AAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPEV
IQQLLQDQVIRECRLRNAEGEETELITETFTSKSAISKSSDGGPSTSQGTDAQNKSDVPA
DLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDI
NIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGN
SSVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERV
MEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGP
KLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQF
LIKFHERRNDKIIVFADNVFALKEYAIRLGKPYIYGPTAQGERMQILQNFKHNPKINTIF
ISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGTVAEEYNAFFYSLVSQD
TQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEQLSFSSKEEQQQLLQKVLQASDLDAEE
EVVAGEYGSKSTQVSRRFGTMSSMSGADDAVYMEYHTSRSKASSNKHVHPLFKRFRK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcttctaaaagctgatcattcctcacgtccactctgggtggctcctgatggccatgtt
ttcctggaagccttttctcctgtttacaaatatgctcaggattttctggttgctattgct
gaacctgtgtgcaggccaacccatatacacgaatacaaactcactgcttactcgctttat
gctgctgtcagtgttggtttacaaacaagtgacatcactgaatatttgcaaaagctgagc
aagactggtgtcccagatggaataattcagtttatcaagctgtgtactgtcagctatgga
aaggtaaagctagtgctgaaacacaacaggtattttgtcgaaagcacccatcctgaagtc
atccagcagcttcttcaggaccaggtcatcagagagtgtcggctgagaaacgctgaggga
gaagaaacagagctcatcacggagacattcacgagtaaatcagcaatttcaaaatccagt
gacggaggtccttcaacatcacaagggacagatgctcagaataaatcggatgtcccagct
gacctatttgagttttacgagcagatggacaaagatgaggaggaggaggaagaaacacag
actgtatcttttgaagtcaagcaggaaatgattgaagagcttcagaagcgttgcatccac
ttggagtaccccttgctggcagagtatgacttcagaaatgattcagtgaatcctgacatt
aatatagacctgaagcccacagctgttctcagaccttaccaggagaaaagtctaaggaag
atgtttgggaatgggcgtgctagatctggtgttattgtcctgccatgtggtgctggcaag
tctttagttggagttacagctgcatgtacagtccgtaagcgttgcctggtacttggcaac
tcttctgtctctgtggagcagtggaaagcccagttcaaaatgtggtccaccatagatgac
agccaaatctgtcgattcacgtcagatgccaaggacaagcctatcggctgctctgttgcc
attagcacctactctatgttgggacacacaactaagaggtcttgggaagcagagagagta
atggaatggcttaaaagtcaagagtggggccttatgatacttgatgaggtgcacaccata
cctgccaaaatgttcagacgtgtgctcaccattgtgcaagctcactgcaaactgggactg
actgctactctcgtcagagaagatgacaaaattgtcgacttgaatttcctgattggacca
aaactctatgaagccaactggatggagctacagaacaatggctacattgctaaagtccag
tgtgctgaggtttggtgcccaatgtctccagagttttacagagaatatgtggctatcaaa
acaaagaagcggatattgctctacactatgaacccaaataaattcagagcatgccagttc
ctgatcaaatttcatgagcgaaggaatgacaagatcattgtatttgctgacaatgtgttt
gcattgaaggagtatgcaatcagactggggaaaccttacatatatggtcctactgcacaa
ggagagagaatgcagattctacagaacttcaagcacaatccaaaaatcaacactatcttt
atttccaaggtgggtgacacatcgtttgatctaccagaagccaatgttctgattcagatt
tcgtcccatggtgggtctcgaagacaggaggctcaaagattgggacgagtgctgagagcc
aaaaaagggacagttgcggaggaatacaatgccttcttttattcccttgtatcccaagat
actcaggaaatggcatattcaaccaaacgacaaagatttctggtcgatcaaggttacagc
ttcaaggtgatcacaaagcttgcaggaatggaagaagaacaactttcattttcatccaaa
gaagagcagcagcagcttcttcagaaggtcctgcaagcatctgacctggatgctgaggaa
gaggtggtagcaggagagtatggctcaaagtcaactcaggtgtctcgtcgttttggcaca
atgagctctatgtctggggcagatgacgcagtttatatggaatatcacacttcacggagc
aaggcatcttcaaataaacatgtccatccacttttcaaacgtttcaggaaatga
DBGET
integrated database retrieval system
