Chelonoidis abingdonii (Abingdon island giant tortoise): 116828405
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Entry
116828405 CDS
T07367
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like isoform X1
KO
K12000
tripartite motif-containing protein 7
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116828405
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116828405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_6
U-box
zf-RING_10
zf-RING_11
DUF733
Motif
Other DBs
NCBI-GeneID:
116828405
NCBI-ProteinID:
XP_032642492
Ensembl:
ENSCABG00000004123
UniProt:
A0A8C0GBW8
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MAQAAANLTEDLQNEATCPICLDSFKDPVITECSHNFCGACIREYCKESSRNLSCPQCRK
TIQPRNFRPNRQLANMVEIAVRLGVEAAKKAREIVCKQHKEPLKLFCEQDQSPICLVCRE
SRGHRDHTVVPIEEAAQAYKEKLQSNLCFLQKEREEFEPYGEEKSDELLRQTELERQKIL
SEFEQLHEFLSEQQSLLLAQLEMLDEEILKRQHEYVTKVSEKKLLLNELISEIQRKCSQP
ATEFLKDVGSTLSRCECVKVPTPDPVSPVLKKRVSDFSENNNLVTGVLAMFKENLRAQLD
KEKVNVTLDPETANPHLILSEDGKSVRLGAGRLDVPDNPKRFMSSPCVLGSEGFTTGRHY
WELEVGDGDGWAVGAARESVERNRPSTLQTEGIWAVRLGWDRQYTALTFPPTLLSLDEKP
RKIRVHLDYEEGQVTFYNAENMAQIFSFSASFNEKIFPYFWLWSPESCIQMCP
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggctgctgcgaatctgactgaagatctccagaatgaagccacttgtcccatc
tgcctggactcttttaaagatccagtgatcacagagtgcagccacaatttctgtggggca
tgtatccgcgagtactgcaaggaatcatcacgaaacctctcctgtcctcagtgcagaaag
acaatccagccaagaaacttcaggcccaacaggcagctggcaaacatggtggaaatagct
gtgcggctcggtgtcgaagcagcaaagaaagcgcgagagattgtgtgcaagcagcacaag
gaacctttgaagctcttctgcgaacaagaccagagcccaatctgcctggtgtgcagggag
tcccgggggcacagggaccacactgtggtgcccatagaggaggcagcgcaggcctataag
gaaaagcttcagagcaatttgtgtttcttacaaaaagagagagaagaatttgaaccatat
ggagaagagaaaagcgacgagctgctgagacagacagaattggaaagacagaagattttg
tcggaatttgagcaattgcatgagtttttgagtgaacaacagtcccttcttctggcgcag
ctggaaatgctagatgaggagattttaaagaggcagcatgaatatgtcaccaaagtgtca
gagaaaaagttactactcaacgaactgatcagcgagatacaaaggaaatgttcgcagcca
gcgacagaattccttaaggacgttggcagcaccttgagcaggtgcgagtgtgtgaaggtc
ccaactccagaccccgtttctcctgtgctgaagaagagagtcagcgacttctctgaaaat
aataaccttgtaacaggggtgctggccatgttcaaagagaatctgcgagctcagctggat
aaagaaaaagtcaacgtgactctggatccagaaacagcaaatccccacctcatcctgtca
gaggatgggaaaagtgtgagactcggagccgggcggctggatgtgcctgacaatcccaag
aggttcatgtcgagcccctgtgtcctgggctctgagggattcacaacagggagacactat
tgggaactggaggttggagatggggacggctgggctgtgggggctgccagagagtctgtg
gagagaaacaggccgtcaacgcttcagacggaagggatctgggctgtacgtctgggctgg
gatcgtcaatacacagctctcacttttcccccaacccttctctctcttgacgagaagccc
aggaagatccgagttcacttggactacgaagaggggcaagtgaccttttacaatgcagag
aacatggcccaaatcttcagtttctctgcctctttcaatgagaaaatcttcccttacttc
tggctctggtccccagaatcatgtatccagatgtgtccctga
DBGET
integrated database retrieval system
