Chelonoidis abingdonii (Abingdon island giant tortoise): 116828876
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Entry
116828876 CDS
T07367
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116828876 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116828876 (DHX36)
03012 Translation factors [BR:
cabi03012
]
116828876 (DHX36)
Enzymes [BR:
cabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116828876 (DHX36)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116828876 (DHX36)
Translation factors [BR:
cabi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116828876 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
NACHT
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116828876
NCBI-ProteinID:
XP_032643291
Ensembl:
ENSCABG00000000855
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MSFEHRRGWSRGGGGGPRPSSSSAGAHEGRGGRGRHPSHLKGRDIGLWYARKQSQKSKEP
DRQQRAVVRMDEHREEQIVQLLNTVQTRNEKEQESVSWWSGEEEGQEVAVEKPTLVKTSV
KQRPILEKTFLDRDSEYLFQENELDIDLNEKFREELRRKKFDPRYIEMQRFREKLPSYGI
RRELVTVINNNQVTVISGETGCGKTTQVTQFILDDYIERGRGSACRIVCTQPRRISAISV
AERVAAERAEVCGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKQLSSVSHVV
LDEIHERNLQSDVLMTIIKDLLNVRPDLKVILMSATLNAEKFSEYFDDCPMIHIPGFTFP
VVEYLLEDVIEKLRYTPEDTDYRPRRKKGFMQGQISRPEKEEKEEIYRERWPDYLRQLRG
RYSAGTIDALEMMDDDKIDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQV
MFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKI
KETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEIL
RTPLEELCLQIKILRLGGIAYFLSRLMDPPSREAVMLSINHLMELNALDRQEELTPLGVH
LARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNT
KSDHLTIVNAFAGWEEVRRRGFRSEKDYCWEYFLSSNTLQMLLNMKGQFAEHLLAAGFVS
SKNPRDPKSNTNSDNEKLLKAVICAGLYPKVAKIRKSFSKKRKMVKVCTKTDGTVNIHPK
SVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDD
WIVFESPARIGNLVKDLRGELDDLLQEKIENPHPVDWNDTKSRDTAVLTAIIDLITTQEN
ESPRNYASRFQNERYS
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgagcaccgcaggggctggagccgcggcggaggagggggcccccggccttcc
tcctcctccgcgggggcacacgaaggccgagggggccgggggcggcatcccagtcacctc
aagggccgcgacatcgggctgtggtacgcgcggaagcagagccagaaaagcaaagagccc
gacaggcagcagagagccgttgtgcgtatggatgaacacagggaagaacagatagtacag
ttgctgaatactgtccagactagaaatgaaaaagaacaagaatctgtgtcatggtggtcc
ggtgaggaagaaggtcaagaggtagctgtagagaaaccaaccttggtgaagacttctgta
aagcagagaccaattttggagaaaacattcctagatcgagattcagaatatctctttcaa
gaaaatgagctggatattgatttgaatgagaaatttagagaagagttaagaaggaagaaa
tttgatcctagatacattgaaatgcagagattccgagagaaacttccttcatatgggata
agaagggaactggtaactgtgataaataataatcaggtgactgtgatcagtggtgagact
ggttgtggaaagactacacaagttactcagttcattctggatgactatatagagagaggg
agaggatctgcttgcagaattgtatgtacccaacccaggaggatcagtgctatctcagtg
gcagagagagttgcagctgaaagggcagaagtgtgtggtaatggcaagagtacaggatac
cagattcgtctccagagtcggttaccaaggaaacaaggttccattctgtactgtacaaca
ggaatcgtcctacagtggctccaatcagacaagcaattgtccagtgttagtcatgttgtt
cttgatgaaatccatgaaagaaatcttcaatcagatgtcttaatgactattattaaagat
cttctaaatgttcgaccagatctgaaagtaatactgatgagtgctactttgaatgctgag
aaattttcagaatattttgacgattgtcccatgatccatatacctggattcactttccct
gttgtggaatatcttttggaagatgtaattgaaaagttaagatatactccagaagataca
gattacagaccacgacggaagaagggctttatgcaaggacagataagcagaccagaaaag
gaggagaaagaagaaatctatagagagcgatggccagattatctaaggcagctgcgagga
aggtattcagcaggtactatagatgcgttagaaatgatggatgatgacaagattgatctt
gaccttatagctgcacttatcagacatattgtcctagaggaggaggatggtgcaatactg
gtgtttctcccaggctgggacaatattagcactttacatgacctcttgatgtcacaagtc
atgtttaagtcagataggttcattattatacctctgcattcactgatgcctactgttaac
cagacacaggtttttaaaaagacccctcctggagtacggaaaattgtaattgctaccaac
attgcagagactagcattaccatcgatgatgtggtatacgttatagatggaggaaaaata
aaagaaactcactttgatacgcagaacaacattagcacaatggcagcagagtgggttagt
aaagctaatgccaaacaaaggaaaggtcgagcaggaagagtccagccaggtcactgttat
catctatataatggtctccgtgccagcctactggatgattatcaattaccggaaatccta
aggacacctttggaagaactttgtttacaaatcaagattctaaggcttggtggaattgct
tattttctgagtaggctaatggatccaccatctcgtgaagctgtgatgttgtccataaat
catctaatggaactgaatgctttggatagacaagaagaactgactccattaggtgtccac
ttggcacgattgccagttgagccacatattggaaaaatgatcctttttggagctttattc
tgttgcttagatccagtactcacaattgcagccagcctcagcttcaaggacccctttgtg
attccactgggcaaagagaaagtagcagatgcaagaagaaaagaattatcaaagaatact
aaaagtgaccatctaactattgtgaatgcttttgcgggctgggaagaggtccggcgacgt
ggtttcagaagtgaaaaggactattgctgggagtattttctctcttcaaatacacttcag
atgctgcttaacatgaaaggacagtttgctgaacatctccttgcggctgggtttgtgagt
agcaaaaacccccgagatcccaaatctaataccaactcagataatgagaagttacttaaa
gcagtcatctgtgctggtttatatccaaaagttgcaaagatccgtaaaagctttagcaaa
aagagaaaaatggtgaaagtttgcaccaagacagatggaacagttaacattcatcctaaa
tctgttaacgtggaagagacagaattccattataactggcttgtgtatcatttgaagatg
agaactagcagtatttacctgtatgattgtacagaggtctctccatactgtcttttgttc
ttcggaggagatatttccatccagaaggataaagatcaggatacgattgcagtggatgac
tggattgtctttgagtctccagcaaggataggaaatctagttaaggatttaagaggagaa
ctggatgaccttctacaagaaaaaattgaaaacccacaccctgtggattggaatgacact
aaatccagggacactgcagtgctgacagccattatagacctaatcacaacacaggagaat
gaaagtcccagaaactatgcctctcgatttcagaatgaacgttacagttga
DBGET
integrated database retrieval system
