Chelonoidis abingdonii (Abingdon island giant tortoise): 116828920
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Entry
116828920 CDS
T07367
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116828920 (TOPORS)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116828920 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cabi03037
]
116828920 (TOPORS)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116828920 (TOPORS)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116828920 (TOPORS)
UBL E3 ligases
116828920 (TOPORS)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116828920 (TOPORS)
Cilium and associated proteins [BR:
cabi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116828920 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
116828920
NCBI-ProteinID:
XP_032643332
Ensembl:
ENSCABG00000003415
UniProt:
A0A8C0ILA9
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MSDPLNYLTERGRRRRRLRHRNEEPRAGPGSGPARCRRQRLKAADTGQPRVEGEPAAPDS
GTANITSTTEEFTVDSSFSPKAGTSKRHQTMPTDTSPDSKCPICLDRFDNVAYLDRCLHR
FCFRCVQEWSKNKAECPLCKQPFHSIFHTVRAEDDFKEYVLRPLQNGSFASPDGRRFRYR
TTLTRERHTSAYPRRSSSSRRTLSPPDNGILFEGLSGQPVGQRDGGIHQMIRRLASRRQA
SAEGRSLRQIQEQDIINFRRALYRSGVRVRNIQDGGRYRDISAEFFRRNPACLHRLVPWL
KRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFSDDLKPFLLHRTNHFLHEFISFAR
CPFNIEAYDQHANYDCPAPSYEEGSQSESSVITISPDETDSQEPDHNASTTGVDRAPWDD
ETPGPSYSSSEQVHVAVASPLVTSETSDEEPSRNGTELQEQLKDNAAPDGDTDSSSDNCV
IVGYVKPLAERTPELVELSSDSEESVDDGKSEDVKKPQSIQFHVFSVSDASGWSSPCSPV
SKDGKYSHKSSTSPSHKKMKSKKNEKDTTKIEDLSIKDSLQSSSTRRDRVCSPCSHRLSR
RRRSRSSESYSQHSRNRDSHGQRARRKHHSKERLKSRLSRSRDSSRHRSKREKRRSRPRD
ISLSRKSQTVSLSSESTISRDVSRSRSRSNDHSRRRSRSRDSDHYYVRDNYQSRYQWEYT
FYSRNMDRDGYESSYRRRTQARAHYSRQSASPEYRIQSFSERTNTRNQRGHNESRYYYYE
RRRSRSRSSNRSRTASDRMRYEKPGGKRKYKTRHLENAHKENATSPCEGKGSDLQKSLSK
YSGCYKNQDSLLDNQAGIGTRHKKRKKKSRSPSVEIIYEGKASDTTRHHKKKKKKHKKKH
RRHHTSNSSHSSPVVITIDSDSDKETGIQENTECDSSISWTTTTQLNERENETPSPVLGT
SDCKHEYTVDGESRLLDKDSSITTTRGDLGDDPGKVDRQFQETSNEQALAVADNSGASDM
GTLPSNPETIQTESTSQLPSSRASFVGRSERPPLILRLPKRLIDRSYWLDSPEKKM
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccgctgaattacctcacagagcgggggcgccgccgccgccgccttcgtcac
aggaacgaagagccgcgcgcgggccccggctcgggccccgcccgctgccgccgtcagaga
ctcaaagccgcggacaccgggcagccccgcgtggagggcgaaccggccgcaccggacagc
ggcaccgctaacataacatcaacaactgaggagtttacggtggatagcagcttttcacct
aaagctggcacaagcaagcggcatcagacaatgccaacagatacatctccagactctaaa
tgtccaatctgcttggacagatttgacaatgtggcctatttagatcgttgcttgcatagg
ttctgctttcgttgtgtacaggagtggtcaaaaaacaaagctgaatgtccactctgcaaa
cagcctttccattcgatcttccatacagtgagagctgaagatgatttcaaagagtacgta
ctcaggcctttgcagaatggctcttttgctagccctgatgggcggagatttcgttaccgt
actacgttaacaagggaacgtcatacatcagcttatcctcgaaggagttcctcttctcga
agaacactgtcacctccagataatgggatattatttgaaggattatccggtcaacctgtg
gggcaaagagacgggggaattcatcagatgattagacggcttgcatcaaggagacaagct
agtgcagagggtagatcactgcggcaaattcaagaacaagatataattaatttccgaaga
gctctgtatcgttctggtgtgcgtgttagaaatattcaagatggtggtcgttatagagac
atttcagctgagtttttccgccggaaccccgcttgtcttcacagattagttccatggctg
aaacgtgagctaacagtcctgtttggtgcccatgggtctctagtcaatattgtacagcat
atcatcatgagtaatgtgactagatatgatttggagagtcaggccttttctgatgactta
aagccttttttgctccatcgtactaaccactttttacatgaattcattagctttgcccga
tgtccttttaacatagaggcgtacgaccagcatgccaattatgattgtcctgctccttca
tatgaagaaggaagccagtcagaatcatcagttatcacaatatctccagatgagacagat
tcgcaagaaccagatcataatgcatccacaactggtgttgatcgggcaccttgggatgat
gaaactccagggccatcatattccagctcagagcaggttcatgttgccgtggcttctcct
ttggttacttcagaaacttctgatgaagaacctagtagaaatggaactgaactgcaagag
cagttaaaagataatgcagccccagatggtgacactgattcttcttcagacaactgtgtc
attgttgggtatgttaagccattagctgaaagaacaccagagcttgttgagctgtcctcg
gactctgaggagtcggttgatgatgggaaaagcgaggatgtgaagaaaccacagtctatc
cagtttcacgtttttagtgtcagtgatgctagtgggtggtcatcgccatgctctcctgta
tctaaggatggtaaatatagccataaaagcagcacctctccctcgcataagaagatgaag
tcaaaaaagaatgagaaagatacaactaaaatagaagatttgtctataaaggactcttta
caaagttcctctacaagaagggatagggtgtgctctccatgcagccacagattatccagg
aggaggagatcaaggagttcagaatcatattcacagcactctcgcaacagggacagccat
ggccagagagccaggaggaaacatcacagcaaagagaggttaaaaagtagactgtcaaga
agcagagatagtagcagacataggagcaaaagagagaaaaggaggtcaagacctcgagac
ataagtttatctagaaaaagccagacagtgtctctaagtagtgagagcactatatctaga
gatgtaagcaggtcaagatcccggagtaatgatcatagcagaagaagatcaaggagcaga
gacagtgatcattattatgtaagagataattaccaaagtagataccagtgggagtacact
ttttacagtagaaacatggacagagatggctatgaatcctcatacaggaggagaactcag
gccagagctcattattcaaggcagtcagctagtccagagtacagaatacagtccttttct
gaaaggacaaatactcgaaatcagagaggtcacaatgaaagcagatattactactatgaa
agacgcagatcaaggagtcgatccagtaatagatctcggactgcttctgatagaatgaga
tatgaaaagcctggtggaaaaaggaaatacaaaactcgccacttggagaatgcacacaaa
gagaatgcaacaagcccttgtgaagggaaaggaagtgacttgcagaagtctttgtcaaaa
tacagtggttgctacaaaaatcaggacagtcttttagacaaccaagcaggcattgggact
agacataaaaagaggaaaaaaaagtcaagaagtccaagtgtagagattatttatgaagga
aaagctagtgacacaaccagacatcacaaaaagaaaaagaaaaagcacaagaagaaacac
aggagacatcacacaagtaactcatcacattcttctccagttgtgattacaattgacagt
gatagtgataaggagactggaatacaagaaaatactgagtgtgacagtagtatctcttgg
acaaccacaacccagttaaatgagagagaaaatgagactccatcccctgtcttgggaaca
agtgattgtaagcatgagtacacagtagatggtgaaagtcgactgttggacaaggattcc
agtattactaccactaggggagacttaggtgatgaccctggaaaggtagatcgccaattt
caggaaacatcaaatgagcaggctcttgcagtggcagacaatagtggtgcatctgacatg
ggaactctaccgagcaatcctgaaactatacaaactgaatcaaccagtcagttgccttct
tccagagcatcatttgtagggcgttcagagagaccacctttgatattaagactgccaaag
agacttattgacagatcatattggcttgactccccagaaaaaaagatgtaa
DBGET
integrated database retrieval system
