Chelonoidis abingdonii (Abingdon island giant tortoise): 116829005
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Entry
116829005 CDS
T07367
Symbol
CROCC
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cabi03037
]
116829005 (CROCC)
Cilium and associated proteins [BR:
cabi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116829005 (CROCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
Crescentin
Motif
Other DBs
NCBI-GeneID:
116829005
NCBI-ProteinID:
XP_032643466
Ensembl:
ENSCABG00000014537
LinkDB
All DBs
Position
Unknown
AA seq
1985 aa
AA seq
DB search
MSSLLSLQEENRILQQELSRVEDLLAQSRAERDELAIKYNAISERLEQALRLETGERERE
SLENKSLAQQNIELRRRLEEEQAAYKRKLQAYQEGQQRQAQLVQKLQAKVLQYKKKCGEV
EQQLLEKSTELEQQRLTSRLDMTDSRLRQDEEHSNDLENALIRLEEEQQRSASLAQVNAM
LREQLDQANAANQALSEDIRKLTTDWTKARNELEQREVEWRREEESFNTYFSNEHSRLLT
LWRQVVGFRRHFSEMKTVTERDLSELNNELSRSGRTIHAACLNLSSNLRLSESSASAALE
KQALLLAQLEEQLKDKVRDMIQLQVRCDMEKAELGTRIAETTATMERLKAQDSGKEKTIE
TLTQKLENLEAARAQEQAALEAEEIEALRTESEMLQQTLRDLAQAVLSDTDSAIHLTGTE
RTTDVSDSDATGFSLRGLSSSLRTPSPLRRSSPRRSSSPRRSLSPAFSDSTLAVVHSALQ
KRQLQVQDIRGKYEAMQELVGSLKKQLAERDQERRSLEQKILQLKDDVDCSLRAKDDAVR
DASRFRSSADLLGSEKSNLERSLQALQQHVEALRQESERLQLANSDLQRQREHLEDEKED
IAKDKERAQKEIERGHKQLEQLEVKKSGLKKELMLVKEALNKATLEKEVSENEKVEMAEA
LSRAEAGRAELELTTSKLKAEEASLRDSLSKMSSLNEGLAQDKIELNRIISQLEEEKVAL
LGQKQELEQEKTSIRDELVRLEQEKLELDVERQGLQHSLQDVERSRERLERELLGLQKER
VQLQEQLGQLSRQRNVASEELGQVRREQERHSEALLRAAREKEGLMKEKASLVVQLAASE
RENRGLAEEIAGLRSEKDALETTLFDIQQQLAQLDTRKEQLEADSQNLLLAKEMLQVELA
SIRKQREMDVTRLERDKELLAQKLAQTEQETQVTLRNKQAAHEEDVDRLQREKEAVCLEL
ESEREELLHRLGREREELLARYEAEKEELSEEITALQQERDESLLQAENEKQQALSLKES
EKTLLSEKLTSSQHSLASVTVEMERQKREAMSRQEQDRSTVNALTSELKSLRVQLEETVA
AHEREAWGLQEQVKELARQRECTLREVEELKTQLRMVEDARDSIRRDVIEAHRKVRESQE
GHEIQRKDILDLRRSLSDEAKEKEALHRSNQELRAAIKRAESDRISLKRANEEKEQKLSI
LEESRAAAGKEAADLRSSLQEVERSRLEARRELQELRRQIKMLDSENTKKNKEVAELQAR
VALDEQREEESRRESFGLKQKIVESEASRESTRKELHNLQRKLSEQEGEFRVREKDLLGS
LEEARGNEKKLLDNARNLEIKLENAQAEAAELSLRLSAAEGRAHGLEAELARVEGLKRDV
EFKLGSLHSALRRTMGISRGGRAPSPAIRRRSSSPKRFFSPAKGDNAYSTTDGRGSPTPR
AGSPERSPSSRPLSPERALSPSRSEQLVADIDPEVVRAALRDFLQELRETQRERDDLRAQ
LGSLTRQLAEMESEQDSASTRVQQLQKLVTESEEGRRSADGKLSSAQTALLLQEETLRRN
ERERKALMDKVTALERSLQSADSDRRTTQEKISKMKANEAKLETDKRRLKEILDASESRC
TKLELLRRSLEGELQRVKLVLSDREMEIQVLQDRGDMLQRQVTDSETRANALQLSMERLH
LTLAKAEEGESALKDKVQGLALSLSESSASAGATQEKVLQLQKALTASEHDRRVLQERLD
AARQAVSEAKKQNSELADRVQGLKTEQVELELQKEELEGQVRQQQELLRQCQESESAALR
SLQKLQEDKHLLQERLGSLQRALAQLESEKREAERSSLRLEKDKMALKKTLDKVEREKLK
THEDSVRLTVEKGQLDRSLNTVEQELAEAQRQIQLLEAQVAEMEQTQSQSLVETATRHRQ
ELQLEIERLRGSQLQAERTLEARERAHRQRVKGLEEQISTLKDQLQQELRRCQTHYSHSS
LLSGN
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgctcctctccctccaggaggagaaccgcatcctgcagcaggagctgtcccgt
gtcgaggacctgctggcacagagccgggccgagcgcgatgagttggccatcaaatataat
gccatcagcgagaggctggagcaggccctgcgcctggagaccggggagcgagagcgggag
tcgctggagaacaagagcctggcccagcagaacatcgagctgcgccgccgcctggaggag
gagcaggccgcctacaaacgcaagctccaggcctaccaggagggccagcagcggcaggcg
cagctcgtccagaagctgcaggcaaaggttctccagtacaagaagaagtgtggggaggtg
gaacagcagctgctggagaaatcaaccgagctggagcagcagagactcacgagccggctg
gacatgacggactcacgcctgcgccaggacgaagagcacagcaatgacctagagaatgcg
ctcatccggctggaggaggagcagcaaaggagcgccagcctggcccaggtcaacgccatg
ctgcgggaacagctggaccaggccaatgccgccaaccaggccctcagcgaggacatccgg
aagctgacgaccgactggaccaaagctcgcaacgagctggagcagcgggaggtggagtgg
aggcgagaggaggagtctttcaacacttacttcagcaacgagcacagccggctgctgacc
ctctggaggcaggtggtgggcttccggcgccacttcagtgagatgaagaccgtgaccgag
agggacctgtcggagctgaacaacgagctgtccaggtccggccgcaccatccacgctgcc
tgcctgaacctgagcagcaacctgcgtctgtcggaaagcagcgccagcgcggccctggag
aagcaggctctgctgctggcccagctggaggagcagctgaaggacaaggtgcgcgacatg
atccagctgcaggtcaggtgtgacatggagaaagcggagctcggcactagaatcgctgag
acgacagccaccatggaacgcttgaaagcccaggactcggggaaggagaagacgatcgag
acgctgacccagaaactggaaaatctggaggctgcacgggcgcaggagcaggcagcgctg
gaggccgaggagatcgaggccttgcggacagagtcggagatgctccagcagaccctgcga
gatcttgctcaggctgtcctgtctgacactgacagcgccatccacctcacaggcacggag
cgaacgacggacgtttcggacagcgacgccacgggattcagcctgcggggcctctcctcc
agccttcgcaccccgtccccgctccggcgctcctccccccggcgcagctcctcgccccgg
cgcagcctctcgccagctttctctgactccacgctggccgtggtgcactccgccttgcag
aagaggcagctgcaggtgcaggacatccgcggcaagtacgaagccatgcaggagctggtg
gggtccctgaagaagcagcttgcggagagagatcaggagcgccgctctctggagcagaag
atcctgcagctgaaggacgacgtcgactgctccttgcgggccaaggatgatgccgtgcgg
gatgccagccgcttccgctcctcagctgacctgctgggcagcgagaagagcaacctggag
cgaagcctgcaggccctgcagcagcacgtggaggccctgcggcaggagagcgagaggctg
cagctggccaacagcgacctgcagcggcagcgagagcacctggaggacgagaaggaggac
atcgcgaaggacaaggagcgggcgcagaaggagattgaacgcggccacaaacagctggag
cagctggaagtgaagaaatctggtctgaaaaaggagctgatgctcgttaaggaggctctg
aacaaagccaccctggagaaggaggtgtctgagaatgagaaggtggagatggcggaggct
ctttccagggcggaggccggccgggccgagctggagctgaccactagcaagctgaaggcg
gaggaggcctcgctgcgcgactcgctgtccaagatgagctccctgaatgaggggctggcc
caggataaaatcgaactcaacaggatcatcagccagctggaggaggagaaggtggccctg
ctggggcagaagcaggagttggagcaggagaagacctcgatccgtgacgagctggtccgg
ctggagcaggagaagcttgagctggacgtggagagacagggcctgcagcactccctgcag
gatgtggagcggagccgggagaggctggagcgggagctgctgggcctgcagaaggagagg
gtgcagctgcaggagcagctggggcagctgtcccgccagaggaacgtggccagcgaggag
ctggggcaggtgcggcgggagcaggagcggcacagcgaggccctgctgcgagcggccagg
gagaaggaggggctgatgaaggagaaggccagcctggtggtgcagctggcggcgtcggag
cgagagaacagggggctggcggaggagatcgctgggctccggtcggagaaggatgccttg
gagaccaccctctttgacatccagcagcagctcgctcagctggacacccggaaggagcag
ctggaggccgacagccagaacctgctcctggccaaggagatgctgcaggtggagctggcc
agcatccgcaagcagagggagatggacgtgacccggctggagagggataaggagttgctg
gctcagaagttggctcagacggaacaggagacccaggtcacgctgagaaacaagcaggcg
gctcacgaggaggacgttgatcggctccagagggagaaggaggcagtgtgcctggagttg
gagtcggagcgggaggagctgctgcaccggctgggccgcgagcgggaggagctgctggcc
cgctacgaggcggagaaggaggagctgagtgaggagatcaccgcgctgcagcaggagcgg
gacgagagcctcctgcaggcggagaatgagaagcagcaggctctgtccctcaaggagtcg
gagaagaccctcctatcggagaagctgaccagctcccagcacagcctcgccagcgtgacc
gtggagatggagcggcagaagcgagaggccatgagccggcaggagcaggaccggagcacc
gtcaatgccctgacctcggagctgaagagcttgcgggtgcagctggaagaaaccgtcgcg
gcccacgagcgggaggcctgggggctgcaggagcaggtcaaggagctggccaggcagcgg
gaatgcaccctccgcgaggtggaggagctgaagacccagctgcgcatggtggaggatgcc
cgggacagcatccggcgggacgtgatcgaggcccaccggaaggtgcgggagagccaggag
ggccacgagatccagaggaaggacatcctggacctgcggcgcagcctgagcgacgaggcc
aaggaaaaggaggccctgcacagatccaaccaggagctgcgggctgccatcaagcgagcg
gagagcgaccgcatcagcttgaagcgggccaacgaggagaaggagcagaagctgtccatc
ctggaggagtcgcgggcggctgcgggcaaggaagccgccgacctgcggagcagcctgcag
gaggtggagcgatcgcggctggaggcccgcagggagctgcaggagctgaggcgacagatc
aagatgctggacagcgagaacaccaagaagaacaaggaggtggccgagctgcaggcccgg
gtggcactggacgagcagcgggaggaggagagccggcgggaatccttcggcctcaagcag
aagatcgtggagagcgaagccagcagggagtccaccaggaaggagctccacaacctgcag
cggaagctgtcggagcaggagggtgagttccgggtgcgggagaaggacctcctgggcagt
ctggaggaggcccgcggcaatgagaagaagctgctggacaacgcccgcaacctggagatc
aagttggagaatgcgcaggccgaggcggccgagctgagcctccggctgagcgccgccgag
ggccgcgcccatggcctggaggccgagctggctcgagtggagggtttgaagcgggacgtg
gagttcaaactggggagcctgcattccgccctgaggcgcaccatgggcatcagccggggc
ggccgggcccccagcccagccatcaggaggcgtagcagctcccccaaaagattcttctcc
cctgccaaaggtgacaacgcatacagcaccacggacgggcgcggcagccccaccccgcgg
gcgggcagccccgagcgcagccccagctcgcgccctctgtctccggagcgtgccctctcg
cccagccgcagcgagcagctggtggcggatatcgaccctgaagtggtgcgggctgccctc
cgggacttcctgcaagagctgcgggagacccagcgcgagcgggatgatctgcgggcccag
ctgggcagcctgacccgccagctggccgagatggagtccgagcaggacagcgccagcacc
cgagtgcagcagctgcagaagcttgtgactgaaagcgaggaagggaggcgcagcgcggat
ggcaagctgagcagcgcccagaccgccctcctgctgcaggaggagaccctccgccgcaac
gagcgggagcgcaaggcattgatggacaaggtgacggcgctggagcggagcctgcagtcg
gcagacagcgaccggcgaaccacccaggagaagatcagcaagatgaaggccaacgaggcc
aagctggagaccgacaaacggcgtctgaaggagatcctggacgcctcggagagccgctgc
accaagctggagctgctgcggcgctcgctggagggggagctgcagagggtgaagctggtg
ctgagtgaccgcgagatggagatccaggtgctgcaggaccgcggtgacatgctgcagaga
caggtcaccgacagcgagacgagggccaatgccctgcagctctccatggagcgactgcac
ctcaccctggccaaggccgaggaaggcgagagtgccctgaaggacaaggtgcagggcctg
gccctgtctctgtcggagagcagcgccagtgccggtgccacccaggagaaagtgctccag
ctgcagaaggcgctgacagccagcgaacatgaccgccgagtgctgcaggagcggctggac
gctgcccgccaggcggtctcggaagccaagaagcagaacagcgagctggctgaccgggtc
caagggctgaaaaccgagcaggtggagctggagctgcagaaggaggagctcgaagggcag
gtccggcagcaacaggagctgctgcgccagtgccaggagagcgagagcgcggccctgcgg
agcctgcagaagctgcaggaggacaagcacctgctgcaggagcggctgggcagcctgcag
cgggcgctggcccagctggagagcgagaagcgggaggcggagcgctcctccctgcggctg
gagaaggacaagatggccctgaagaagaccctggacaaggtggagcgcgagaagctgaag
acgcacgaggattcggtgcggctgacagtggagaagggccagctggaccgttccctcaac
acggtggagcaggagttggcggaggctcagcgtcagatccagctgcttgaggctcaggta
gcggagatggagcagacccagtcccagagcctggtggagacggccacccgccaccggcag
gagctgcagctggagatcgagcggctgcgcggctcccagctgcaggcggagcgcacgctg
gaggccagggagcgagcgcacaggcagcgcgtcaaggggctggaggagcagatttccacg
ctgaaggatcagctgcagcaggagctgcggcggtgccagacccattactctcactcctct
ctcctctcagggaactag
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integrated database retrieval system
