Chelonoidis abingdonii (Abingdon island giant tortoise): 116829184
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Entry
116829184 CDS
T07367
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116829184 (TNRC6B)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116829184 (TNRC6B)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116829184 (TNRC6B)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116829184 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
116829184
NCBI-ProteinID:
XP_032643774
Ensembl:
ENSCABG00000022960
LinkDB
All DBs
Position
Unknown
AA seq
1835 aa
AA seq
DB search
MHFASPISDLQCLPLQMEHEDFVMEGHGKTPPPGEENKQEKDQEREEQLMEDKKRKKEDK
KKKESTQKVTDQKTKVPEVTKLSSSQPVAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSA
ARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGLPPSSAPGANPNNAQPVTGA
VLQSDSGTATDSTIGGAAASNYANSTWGSGAASNNGTNANPTHVWDKVIVDGSDMEEWPC
IASKDAESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSGSAGKECNLGAWKSD
PKAKSVQSSNPAAESNNGLGNWRNLSGQDRIGPGSGFSNFNPKSNPSAWPALVQEGNSRK
GILESDNGNANAQISTVGQTSREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLN
LSSPNPMENKGMPFEMGLGNPSRSTDAPSQSTGERKTGSVGSWGTSRGPSGTDTAAGQSN
SGNHGNNGKDREDSWKGVSVQKPNGSRNDSWDNNRSMGGGSWNFGPQHSNENKWGEGNKL
TSGVSQGEWKQPSGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNSQAPCWGRSS
SSTGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTG
WGQTQIKQDTVWDIEEMPRPEGKSDKGTEGWESSATQTKNSGGWGDAPSQSNQNKSGWGE
LSTPTEWKDPKNTGGWNDYKNNNSSSWGGVRPEEKPSSWNDNSNKDQGWGGRQPNQGWSS
GKNGWGEEVDQTKNSNWEGAGNKPVSGWGEGGQNEIGTWGNGANANAASKGGWDDCKRTP
AWNENSRQTNSWNKQHQQQQEASGSWGPPPPGNGRPPNPNWSSGPQPAAPKDEEPSGWEE
PSPQSVSRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAPREQSLPTPMTSKSTASV
WSKSTPPAPDNGTSAWGEPNETSPGWGEVDDTGASTTGWGNAPSNAPNTMKPSSKSMQDG
WAESDGPVTGTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTSWGQGGKKPQIKCSLKGGNS
DSWMNPLSKQFSNMGLLSQTEDTQGSKMDMSVGGLPDKKFEVDKRAMNLGDFNDIMRKDR
SGFRPPNSKDMGTTDSGPYFEKAGNHGLFGNSTAQSRGMHTPVQPLNPSPNIRAQVPPQF
LSPQVSASVLKQFPNGGLNPGLFNISPQQIAMLSQLPNIPQFQLACQLLLQQQQQQQQQQ
QLLQNQRKISQAVRQQQEQQLARMVSALQQQQRQPGMKHSPSHPVGPKSHLDSMVPNALN
VGLSDIQTKGQIPGYGSGFGSSGMDYGMVGGKEAGSESRFKQWTSMMEGLPSIASQDASV
HKNGAIVPPGKARGGSPYNQFDIIPGDPLGGHSGPAGDSWLPAKSPPTNKIGSKSSNASW
PPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTS
LPSPGAWPYSASDNSFTNVHSTSAKFSDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTT
GLPRPPPGLTNPKPSSPWSSTAPRSVRGWGAQDSRLASGEKDLLIASLLGREGCVLYSAN
GVDMMRPSQERKLRLPASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFH
LNLTQGTALIRYNTKQEAAKAQTALHMCVLGNTTILAEFATDEEVSRFLAQAQPPTPAAT
PSAPAAGWQSLETGQNQPDAVGPPLNLFGGSAGLGQWSSSGGSSSGGDLSGASLWGPPNY
SSSLWGVPSVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgcttcaccaatttctgacctgcaatgcttgcctttgcagatggaacatgag
gattttgtaatggaagggcatggcaagactccacctcctggtgaagaaaacaaacaagag
aaggatcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaagaggataag
aaaaagaaggaatctactcagaaggtcacagatcaaaaaaccaaagtgcccgaagtgacg
aaactaagttcaagccagccagtggctgccagcccaattggcagctctccatcgccacca
gtcaatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgccaagcgcc
gcccgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtg
ttactgaaacgtgggcagccccctcctccatcctgtatgctacttgggggtggggcaggg
cttcctccctcttcagcacctggagcaaacccaaacaacgcacaaccagtgacaggagca
gtgctgcagagcgacagtgggactgcaacagattcaacaattggaggtgctgctgcttca
aattatgcaaattccacttggggttctggagccgcctccaacaacggcaccaacgccaat
ccaactcacgtctgggacaaggtgattgtagacgggtctgacatggaagagtggccttgt
attgccagcaaagacgctgagtcttcttccgaaaataccaccgataacaacagtgcctcg
aaccctggctcagagaagagcactctgccaggaagcaccactagtaacaaaggaaaagga
agccagtgtcagtctggaagtgctgggaaggaatgtaatcttggggcctggaaatctgat
cccaaagctaaatctgttcaatcttccaaccctgctgcggagagtaacaatggactagga
aattggaggaacttgagtgggcaggacagaataggccctggttctggcttcagcaacttt
aacccaaaaagcaacccatctgcctggccagcactggttcaagagggcaattctaggaaa
gggattttggagtctgataatggtaacgccaatgcacagattagcacagtaggtcagact
tctagggaacagcagtcaaagatggaaaacgcgggtgttaactttgttgtctctggcaga
gaacaggctcaaatacataacactgatggaccaaaaaatggaaacactaactccttgaac
ttaagttcgccaaaccctatggagaataagggaatgccctttgaaatgggcttggggaac
ccctccagaagcactgacgccccttcacaaagcactggagaaagaaagactgggagtgtt
ggatcttggggtacatctagggggccttctggaactgacacagccgctggacaaagcaat
tctggaaaccatgggaacaatggaaaggatagagaggactcctggaaaggagtttctgtt
caaaaacctaatgggtcaagaaatgattcttgggataacaacaggtctatgggtggtggg
tcttggaactttggccctcagcactcaaatgaaaacaaatggggtgaagggaacaaattg
acatctggggtctctcagggagaatggaaacagccgtctgggtctgatgaactgaagatt
ggagaatggagtggtccaaaccaaccaaattctagcactggagcatgggacaatcaaaag
ggccacccccttcctgaaaaccaaggcaattcccaggctccctgttggggaagatcttcc
agctctacaggaagtgaggttggaggtcaaagcactggaagtaaccacaaagcaggaagt
agtgacagtcacaattctggacgccgatcatacaggcctacgcatcctgattgccaggca
gtcttgcagactttgctgagcaggactgatttggacccccgtgtgctttcaaacactggc
tggggccaaactcaaattaagcaagatacagtttgggatattgaagagatgccaaggccc
gaggggaaatctgataaaggaactgaggggtgggagagctctgccacacagacaaagaac
tcagggggctggggagatgcacccagccaaagcaatcaaaacaagtctggatggggtgag
ctttcaacccccacagagtggaaggaccccaaaaacacaggagggtggaatgactataag
aacaacaattcttctagctggggaggagtaagaccagaagaaaagccttcctcttggaat
gacaattccaacaaggatcaagggtggggtggacggcaacctaatcaaggatggtcttcg
ggaaagaacggttggggagaggaagttgaccaaacaaaaaacagtaattgggaaggtgca
ggaaacaaaccagtatcgggttggggtgaaggtgggcaaaatgagattgggacttggggt
aatggtgcaaatgcaaatgccgcttcaaagggcggatgggatgattgtaaaagaacgcca
gcatggaatgagaatagtcgacagaccaattcctggaataagcagcaccagcagcagcag
gaggcttctggctcctggggtccaccacctccaggtaatgggcgacctccaaatccaaac
tggagcagtgggccacagccagctgcccccaaggatgaggaacccagtggctgggaagaa
ccttctccacaatcagtcagtcggaaaatggatattgatgatggcacttcagcatgggga
gaccctagcagttataactacaagaatgtgaacctgtgggacaagaactcgcaaggggga
caggctccacgagaacaaagcctgcctactccaatgactagcaaatcaacagcatcagtc
tggagcaaaagcacaccacctgctccagataatggtacgtctgcctggggtgagccaaat
gaaaccagtcccgggtggggtgaagtagatgatacaggagcatcgacaacaggctggggg
aatgcaccctccaacgccccgaataccatgaaacctagttccaaatctatgcaagatggc
tgggcagagagtgatgggccagtaacaggaacacggcattcaagctgggaagaggaggag
gaaggaggagtctggaacacagcaggctctcaaggaagcagttcctcccacaactcaaca
agctgggggcaaggaggaaagaaaccacaaattaagtgttcattaaaaggaggaaatagt
gattcatggatgaaccctttatccaaacagttttcaaacatgggattgctaagtcaaact
gaggacactcaaggcagtaagatggacatgtctgtaggtggtctcccagataagaaattt
gaggtggacaaacgagccatgaacctcggggattttaatgatataatgagaaaggatcga
tctgggttccgtccacctaattccaaagacatgggaaccacagatagtgggccttatttt
gagaaggctggcaatcatggtttatttggaaacagcacagcgcaatcgaggggcatgcac
acgccagtgcagccactaaacccttcccccaatatccgggcacaagtgcctccccagttt
ctttcccctcaggtttctgcctccgtgctcaagcagtttcccaacggtggcttgaaccca
ggtcttttcaatatatctcctcaacagattgctatgctgagtcagcttccaaatattcct
cagtttcaactagcatgtcagcttcttcttcagcaacagcagcaacagcagcagcaacaa
cagctgttacagaaccagagaaagatttctcaagctgtgcgacagcagcaagagcaacag
cttgctcgtatggtgagtgccctccagcagcagcaaaggcagcctggcatgaagcattct
ccatcccatccagttgggcctaagtcacatttagacagcatggtacccaatgctctgaat
gtgggtctctcagatatacagaccaaagggcaaatacccggatatggttctgggtttggt
tcaagtggcatggattatggcatggtgggagggaaagaagctggatcagaatctcgtttt
aaacagtggacttctatgatggaagggctgccctccatagcttcacaagatgccagtgtg
cacaaaaatggtgcaatagtgccccctggaaaagcccgtggaggatccccctacaaccaa
tttgacataatcccaggcgacccgctgggtggccattcaggccctgctggcgatagctgg
ttacctgccaaatctccaccaacgaacaagatcggaagcaaatccagcaatgccagctgg
cctccagagttccagccaggagtgccatggaaaggtattcaaaacattgaccctgaatct
gacccgtatgtgacccctggaagtgtgttggggggtacagccacctctcccattgttgat
actgaccaccaacttctgcgggacaacaccacagggtctaattcttccctcaacacctcg
ctgccttcacctggtgcctggccctacagtgcctctgacaattccttcaccaatgttcat
agcacttcagcaaaattcagtgattacaaatcaacatggtcgccagatcccataggacac
aatcccactcatctctctaacaagatgtggaaaaaccatatttcctcaaggaacactaca
gggctgccccgcccaccacctggcctgaccaacccaaaaccatcatctccctggagcagc
acagcaccccgatcggtcagggggtggggggcacaggactcaaggcttgcctctggtgag
aaggatctcctgatagcatcattgctcggccgtgaggggtgtgtgttatacagcgctaat
ggtgtggatatgatgcggccttcacaagagaggaagttgcggttgcctgcctctacctgg
agtgatggtggctcagttcgtcctagctactggctggttcttcacaatctcactccacag
atcgatgggtcaaccttgaggacgatctgcatgcagcatggcccactgctgacattccat
ctgaacctgacccagggcaccgccctaatccgatacaacaccaaacaggaggcggccaag
gcccagactgcactgcacatgtgtgtgttgggaaacactaccatcctggctgaatttgcc
acagatgaggaggttagtcgctttctggcacaagctcagcccccgacacctgcagcaacc
ccaagtgcacccgcagcaggctggcaatccctggagacaggacagaaccagccagatgca
gttggacctcctttgaatctttttggtgggtcagcagggcttgggcagtggagcagcagt
ggtggcagcagcagtgggggcgatctctctggcgcttcattgtgggggcctccaaactat
tcttcaagcttgtggggggtcccaagtgtagaggatccccatagaatgggcagtcctgct
cccttactacctggagaccttctgggaggagggtcggattcaatctga
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integrated database retrieval system
