Chelonoidis abingdonii (Abingdon island giant tortoise): 116829304
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Entry
116829304 CDS
T07367
Symbol
CDH23
Name
(RefSeq) cadherin-23
KO
K06813
cadherin 23
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cabi03037
]
116829304 (CDH23)
04515 Cell adhesion molecules [BR:
cabi04515
]
116829304 (CDH23)
Cilium and associated proteins [BR:
cabi03037
]
Primary cilia and associated proteins
USH complex and associated proteins
116829304 (CDH23)
Cell adhesion molecules [BR:
cabi04515
]
Cadherins
Major cadherins
116829304 (CDH23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Fibulin_C
PCDH15_12th
DUF6242
DUF3540
DUF6377
Motif
Other DBs
NCBI-GeneID:
116829304
NCBI-ProteinID:
XP_032643953
LinkDB
All DBs
Position
Unknown
AA seq
2167 aa
AA seq
DB search
MRGIRHLDREHNSSHVLEVEAYNSEQGSMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLR
ETAGIGTSVAVVQATDRDTGNGGLVNYKILSGSEGKFEIDESTGLITTIDYLDYETKTSY
LINVSATDQAPPNNQGFCSVYVSLLNELDEAVQFSNLTYEAVITENIPTGSEVLRVLARS
IDNLNQITYKFDPNTNAQALSLFKINGITGVITVKGQVDREKGDFYTLTVVADDGGPKVD
STVVTITVLDENDNSPQFDITSDSAVSVAENSAIGRRIAVVLARDPDAGSNGQVAFSLTS
GNIGTVFEIRTTNNTYGEVFVGRPLDRELLDHYTLKIQASDSGIPPRRKEHTLRVNILDV
NDNPPIIGNPFGYNVSVNENVGGGTAVAQVQATDRDVGLNSVLSYYITQGNEDLIFRMDR
VTGEIATRPSPPDREQQRFYQLVVTVEDEGNPSLSATTTVRVTILDENDNAPVFQQQQYE
VTLDEGPATLNATLIAIKALDRDEGPNGTVAYAIAEGNIVGTFHINSITGQIFTVKELDY
EISHGRYTLVVTATDQCPIPSRRLTTTTTVLVNLNDINDNQPTFPRAYEGPFDITEGQPG
PRVWTFLAHDGDSGPNGQVEYSIIGGDPLGEFVISPVEGELRVRKDAELDRENIAFYNLT
IAAKDRGTPPLSSTVMVGVCVLDINDNDPVLLNLPMNLTLSENTPTSSFVTRILAHDADS
GRNGLLTFNITAGNAENSFYINGTTGIVYVSRPLDREQVAEYRLTVTVKDNPENTRNARR
DFDLLVISIADENDNRPLFTQSSYEAEVMENSPAGTPITVLNGPVLALDSDQGINALVRY
QLLGMPTDLFIVNNRTGVILVKPGRVIDREAFLNPRLELTLVAEDVGKLNSTARLTVTIL
DDNDNRPSFNPAVVTVQLQENSPPGFSVLQVMATDADSGLNQQLSYRIDGGAQDKFLINA
NSGVIQVANITIDREERDTYRLTVMAVDRGMPPLSGTATVNILVDDVNDYRPEFINPIQT
VSVLESAVPGTIIAEVTAIDRDLNPRLEYYIIEILAKDDTNALVLGQQGAFAVDFKTGAV
KVKSSLNRELVATYEVTISVHDNASDVVDRSVSVPNAKLTVNVLDVNDNTPRFRPFGATY
FTERIVEGATPGTTLISLSAVDPDKGANGQITYELLNLSPEGYARLEDLSAGKVIANSTV
DYEEVQWLNFTVRASDNGSPRRSAEIPVYLQIVDINDNNPIFSQTSYQKPVFEDVPLGTV
ILRVRATDADSGRFALIQYNLGDGEGKFGINPNTVCVLQGDIYVLSALDREKKDHYTLTA
VARDNPGDISSNRRENSVQVLITVLDINDFRPQFAKRQFSTSMYENEPAGTSVITMTAID
LDEGDNGVVTYSIEGPGVEAFKIDKNSGLITSRRHLQSYERFNLTVVATDKGRPPLWGTT
MLQVEVIDINDNRPVFVRPPNGTILHIKEEIPLRSNVYEVYATDKDEGLNGAVQYNLLKT
GAGNKDWEYFSIDSSSGLIQTARRLDREKQAVYNLIIVACDQGLPAYETMQPLQVALDDI
DDNEPIFLRPPRSSPQYQALSVPEHSRPGTIVGNVTGAVDADEGSNAIVYYFIAAGNREN
NFKLSQEGKLQVLRDLDRETEPYYSIIVKASSNRNWTPSRGHRAARIQDLDPSTDTTLQE
VRIFLDDINDQPPRFSKSEYTAGVATDAKVGSELIRVVALDSDVGNNSLVLYNILGIRYI
KQHSNDSEEVASVFSIGNLDGILRTFDLFTAYNPGYFVVDIMASDLAGHNDTAIVGIYIL
RDDQRVKIIINEIPDKVRQFEEEFISLLSNITGAIVNTDDVQFHVDKKGRVNSAQTELLI
HVVNRETNRILDVERVIQMIDENKEQLRNLFRNYNVLDVQPAITARAPDDLSELQMAIII
LAILLFLAAMLFILMNWYYRTVHKRKLKAIVAGSTGNRGFMDIMDMPNTNKYSFDGANPV
WLDPFCRNMELAAQAEHEDDLPENLSEITDLWNSPTRTHGTFGREPSAAKPDDDRYLRAA
IQEYDNIAKLGQIMREGPIKLIQNDLDEEEEQSLNQRSLRFRRKQPVEFKSPDGIHVVHG
STGTLLTSDINSLPEDDQKVLGRSLETLNTDCGGYNDRNTRTESAKSTPMHKMREVIVES
PLEITEL
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcatacggcacctggacagagagcacaattcctcccatgtcctggaggtggaa
gcctacaacagtgaacaaggatcaatgaggagctctgttagggtgatagtgtatgtggaa
gatgtaaacgatgaggtgcctgtgtttacccaacggcagtataaccgtctaggactgcga
gaaactgcagggattggaacttctgtcgcagttgtccaggcaacagatcgagacacaggg
aatggaggtctagtgaattataaaatcctgtctggctctgaggggaagtttgaaattgat
gagagcactggcctcatcaccaccatcgactacctggactatgagacaaaaaccagttac
ctgattaatgtctctgccacagaccaggcaccccccaacaaccaaggtttctgcagtgtc
tatgtcagcctgttgaatgaactggatgaggctgtgcagttctcaaacctcacctatgag
gcagtgatcacagaaaacatccccacaggctcagaggtgctgcgcgtcctggcacgctcc
attgacaacctgaaccagatcacctacaagtttgatcccaacaccaatgctcaggcactg
tccctgttcaagatcaatggaatcactggtgtcatcacagtcaaaggccaggtggatcga
gagaagggagatttctacactttaacagtagtggcagatgatgggggaccaaaggttgac
tctactgtggtaacaatcaccgttctggatgagaatgacaacagcccacagtttgacatc
acctctgattctgcggtgagcgtagcagagaacagtgccattgggagacgaattgctgta
gtcttggccagagacccagatgcaggaagcaacgggcaggtggccttttctctgacatca
ggaaatataggtaccgtctttgagatacgcaccaccaacaatacctatggagaggtgttt
gtgggaaggccattggatagagaactgctggatcactacaccttaaagatccaggcatct
gatagcggaatcccacctcggagaaaagagcacacactaagagttaatatcctggatgtc
aacgataacccaccaatcattgggaatccctttggatacaatgttagtgttaatgagaat
gttggtggaggcaccgctgtggctcaggtgcaagcaaccgacagggacgttgggctcaac
agcgtcctttcctactacatcacccaggggaatgaagatctcatcttccgcatggatcga
gtcactggggaaatcgccacccgcccgtcccctccagaccgtgagcagcagaggttctac
cagctggttgtcaccgtggaagatgagggcaacccatccctttcagccactaccacagtg
cgtgtcactatcctggatgagaatgataatgctccagtgttccagcaacagcagtatgaa
gtcaccctggatgagggtccggccaccctcaacgccaccctcattgccatcaaggcactg
gatcgggatgaagggcccaacggcacagttgcatacgccatcgcagaggggaatatcgtg
ggcacctttcatattaacagcattacagggcagatcttcactgtgaaggagctggactat
gagatcagccatggacgctacaccctggttgtcactgccacagaccaatgtccaatccca
tcacgccgtctcacaaccactacaacagtgttggtgaacctgaatgatatcaatgacaac
cagcctacttttccaagagcctatgagggaccctttgacatcacagaaggtcagcctggc
ccaagggtgtggactttcctggcccatgatggggactcagggcctaatggacaagtggag
tacagcatcataggaggggaccctcttggagaatttgtgatctctccggtggagggggag
ctgcgagttcggaaggatgccgagctagatcgagaaaacattgcattctataatctgacc
attgctgccaaggatagggggacacctcctctcagctccacagtcatggtgggagtgtgc
gttttggacattaacgataatgatcctgtgctcctcaacctgccgatgaatctcacgctc
agcgaaaacacccctacctccagctttgtgacccgcattcttgcccatgatgccgacagt
gggcggaacggtctcctgacctttaacataacagccggcaatgcagaaaactccttttac
atcaatggcactactggcatcgtctatgtaagccgtcccttggacagggagcaggtggct
gagtacagattgactgtcacagtgaaagacaatcctgagaacacgcgcaatgccaggcgg
gattttgacctcctggtgatttcaatagcagatgaaaatgataaccggccacttttcact
cagagctcttatgaggcagaggtgatggagaactctccagcaggaactcccatcacagtg
ctcaatggtccagttctagctttggacagtgatcagggcatcaatgcactggtgaggtac
cagctgctggggatgccaacggacctcttcattgtcaacaacagaacaggtgtcattttg
gtaaaacctggcagagtgattgacagagaagccttcctgaacccacgccttgagctcaca
ctggtggcagaggatgttggcaagctgaacagcactgctaggctcactgtgaccatactg
gatgataatgacaacaggccatcgtttaacccagcagtggtgacagtgcaactgcaggaa
aacagccccccaggtttttctgtccttcaggtaatggctacagatgcagacagcggcctc
aaccagcagttgagctaccggattgatggtggagctcaggataagttcctgatcaatgcc
aactccggagtaatccaagtggccaacatcaccatagatagggaagaaagggatacctac
aggctgacagtgatggctgtggatcgaggcatgccccctctttctggcactgccaccgtc
aacatccttgttgatgacgtcaatgattatcggccggagttcatcaacccgatccagacg
gtcagtgtgcttgagtcagcagtgcctggcaccatcatcgctgaggtcacagcaatagac
agagatctcaacccccggctagaatattacatcattgagattctggccaaggatgacacg
aatgctctagtgctgggccagcaaggagcatttgccgtggattttaaaacaggagctgtg
aaggttaagtcctccctaaacagggagcttgtggccacgtatgaagtcaccatctctgtc
catgataacgccagcgatgttgttgaccgttccgtcagcgtgccaaatgctaagctgaca
gtgaacgtgctggacgtcaatgacaacactccccgattccgtccgtttggggccacctat
ttcactgagaggatcgtggaaggagccacaccggggaccaccctgatttccttgtctgcg
gtggacccagacaaaggtgccaatggacagatcacctatgagttgctgaacctttcacca
gaaggctatgcccgacttgaagacctctcagcagggaaggttattgcaaatagcacggtg
gactatgaagaggtgcagtggctgaacttcactgtccgggcctcagacaatggttctcct
cggagatcagctgagatcccagtgtatctccagatagtggatatcaatgacaataatccc
atcttcagccaaacgtcttaccagaagccagtctttgaggatgtcccactgggtacggtc
atcctgagggtcagggccactgatgcagactctgggcgctttgccctcatccagtacaac
ctgggagatggagagggcaagtttgggataaaccccaacacggtctgtgtattgcagggt
gatatctatgtcctgtcagccctggaccgagagaagaaggatcactacacgctgactgct
gtagcaagggacaaccctggggacatttctagtaaccgtcgagagaactctgtgcaggtg
ttgattacggttctggacatcaatgacttcaggccccagtttgccaagcgacagttcagc
accagcatgtatgaaaatgagccagcggggacgtctgtgatcacgatgacagccatagac
cttgatgagggtgacaatggagtggtgacctacagcatcgagggtcctggagtggaggcc
ttcaagattgataaaaactccgggctcatcacatcccgaagacacctacagtcttatgag
aggttcaatctgacagtggtggcaacagacaaaggcaggccacctctgtggggaaccacc
atgctccaggtggaggtcattgacattaatgataaccggccagtgtttgtccggccaccc
aatggcaccatcctgcatattaaagaggaaatacctctccggtccaatgtgtatgaagtc
tatgccacagacaaggatgagggtctcaatggagctgtacagtacaatttattgaaaact
ggagcagggaataaagactgggagtacttcagcatcgactccagcagtggactcatccag
acagcaaggaggctcgaccgagaaaagcaagcagtgtacaatctgatcatcgtggcatgt
gaccagggcctgcccgcgtatgagaccatgcagcctctccaggtggcactggatgacatt
gatgacaatgagcccatcttcctgagaccacctagaagtagccctcagtatcaagctctg
tctgttcctgaacattcccgtcctggtaccattgtggggaatgtcactggtgctgtggat
gcagatgagggctccaatgccatcgtctattacttcatagcagctggtaacagggagaac
aatttcaagttaagccaggaggggaagcttcaggtgctacgagacctggatcgagagaca
gagccctattactccatcattgtcaaagcctccagtaacaggaactggacaccttctagg
ggtcacagggcagccagaatccaggacttggaccccagcacagacaccactctgcaagaa
gtccggatctttctggatgatattaatgatcagcctccccgattctctaaatcagaatac
acagcaggggttgcgacggatgccaaggtgggttcagagctgatcagggtagtggcactg
gactctgatgtggggaacaatagcctggtcttgtacaacatcctggggatccgttacatc
aagcagcactccaatgactcggaggaggtggccagcgtcttcagtattggtaacttggat
gggatcctgcgaacctttgaccttttcacagcctacaaccctggctactttgtggtggat
atcatggcttcagacctagcagggcataatgacactgccattgtcggaatctacatcttg
cgtgatgaccagagggtgaaaatcatcatcaatgagatcccagacaaggtgcggcaattt
gaggaagagttcatcagtctgttgtccaacatcacaggagccattgtcaacacagatgat
gtgcagttccatgtggacaaaaagggccgtgtgaactctgcccagacagagttgctgatc
cacgtggtgaatagagaaaccaataggattctggatgtggagcgagtgatccagatgatt
gatgagaataaggagcagctgaggaatctcttcaggaattacaacgtgttggacgtgcag
cctgccattactgccagggccccagatgacctctcagaactgcagatggcaattatcatc
ttggctattctcctcttcctggctgccatgctcttcatcctcatgaactggtactacaga
acagtacacaaaaggaaattaaaagctatcgtggccggctcaacaggaaaccgaggcttc
atggacatcatggacatgccaaacacaaataaatattcctttgatggggctaaccctgtg
tggctagatcctttctgcaggaatatggagctagcagcacaggcagagcatgaagatgac
ctgcctgagaacctgagtgaaatcacagacctgtggaacagcccaaccaggactcatgga
acatttggaagagagccctctgctgccaaacctgacgacgaccgttacctgcgagcagcc
atccaggaatatgacaacattgccaaactaggtcagatcatgcgggaagggcccatcaag
ctgatccagaatgacctggatgaagaggaggagcagagcctgaaccagaggagccttcgg
ttccggcgcaagcaacctgtagagttcaaaagcccagatggtatccatgtggtgcatggc
agcacaggcactctgctaacttctgatatcaacagcctgccggaggatgaccagaaagtt
ctgggtcggtccctggagacactgaacacagactgtggaggctataatgaccgcaacact
cgcactgagtctgccaaatccacccccatgcacaagatgagggaggtgattgtggagagc
ccactggagatcacagagttatga
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integrated database retrieval system
