Chelonoidis abingdonii (Abingdon island giant tortoise): 116829508
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Entry
116829508 CDS
T07367
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116829508 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116829508 (SMARCA5)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116829508 (SMARCA5)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
116829508 (SMARCA5)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
116829508 (SMARCA5)
RSF complex
116829508 (SMARCA5)
WICH complex
116829508 (SMARCA5)
B-WICH complex
116829508 (SMARCA5)
NORC complex
116829508 (SMARCA5)
BRF complex
116829508 (SMARCA5)
NuRF complex (fruit fly)
116829508 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
116829508
NCBI-ProteinID:
XP_032644270
Ensembl:
ENSCABG00000001865
UniProt:
A0A8C0G3Z5
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MSAGQQEPPLPDEPLSPASTAPPAPTNNGSEAAGAPPPCGGEADMEEVFDDSSPGKQKEI
QEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ
NLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLIS
LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVP
TLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRI
KNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNN
CLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID
ILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLP
KLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPDSSKF
VFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV
EERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDDD
IDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEP
PKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYR
KTIGYKVPRNPDLPNAAQAQKEEQIKIDEADPLNDEELEEKEKLLTQGFTNWNKRDFNQF
IKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQR
RISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDEL
RQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSA
QKRKMDGTPDGRGRKKKLKL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgggcagcaggagccgccgctgccggatgagcccctgtcccccgccagcacc
gcgccccccgcacccactaacaacggtagcgaggccgcgggggcaccacctccttgtggg
ggcgaagctgatatggaggaagtttttgatgattcatcaccaggaaaacaaaaagaaatc
caggaaccagatcctacatatgaagagaaaatgcaaacagatagagcaaacagatttgag
tatctgttaaagcagactgagctgtttgctcatttcattcagcctgctgctcaaaagact
ccaacttcacctttgaaaatgaaaccaggacgtccacgaataaaaaaggatgagaaacag
aatctgctatcagttggcgactatcgacatcgtagaacagaacaggaagaagatgaggag
ctattgacagaaagctccaaggcaactaacgtatgcactcgatttgaagattctccatca
tatgtaaaatggggtaaactgcgtgattatcaggttcgagggttgaactggctcatctct
ttgtatgagaatggcatcaatggtatcctggcagatgaaatgggtcttggaaagacactg
caaacaatttctcttcttggttacatgaaacactacagaaatattcctggccctcacatg
gtattagttcccaaatccactttacacaactggatgaatgagttcaagagatgggtacca
acacttcgagcagtttgtttgataggtgacaaagaccaaagagctgcctttgtccgagat
gtattgttgccaggagaatgggatgtctgtgtaacatcatatgaaatgcttattaaagag
aaatctgtgttcaaaaaatttaactggagatatctagttatagatgaagcccacaggatc
aaaaatgaaaagtcaaagttgtcagaaattgtgagggaattcaagacgacaaatcggctg
ctgttaactggaactccacttcagaacaatttgcatgaactgtgggcacttctcaacttt
cttttgccagatgtctttaactcagctgatgacttcgattcatggtttgatacaaataac
tgtcttggagatcaaaagctggtggaacgtctccacatggtgctaaggccattcctcctt
cgccgtattaaagctgatgtagaaaagagtttgcctccaaagaaggaagttaaaatttat
gtgggtctaagcaaaatgcaaagagaatggtatacacgaatcttaatgaaggatatagat
atattgaactctgctgggaagctggacaaaatgagactgttgaacatcctgatgcaattg
cgaaaatgttgcaatcatccttacctctttgatggagcagaacctggtccaccttacacc
acagatatgcatttggttaccaacagtggcaaaatggtggtattggacaagttgctgcca
aagttgaaagaacaaggctcacgggtactaatctttagtcagatgacaagagtactagac
atcttggaagattactgtatgtggcgaaattatgagtattgtagactagatggacaaaca
cctcatgatgagagacaagattctattaatgcatataatgaacctgacagctccaagttt
gtgtttatgttgagcacgcgtgctggtggtcttggaatcaatctagctactgctgatgtc
gtaattctttatgattcagactggaatccacaagtagatcttcaagctatggaccgagca
cacagaattggccagacaaaaactgttagagtgttcagatttatcacagacaacactgtg
gaggaaagaatagtggaaagagcagaaatgaaacttcgtttggattccatagtcattcaa
caaggaagactggtggatcaaaatctgaataaaataggaaaagatgaaatgctgcagatg
attcgacatggagctacacatgtgtttgcttcaaaggagagtgagattactgatgatgat
attgatggtattttggaaagaggtgcaaagaagactgcagaaatgaatgagaaactctca
aagatgggcgaaagttcacttagaaattttacaatggatacagagtccagtgtatacaac
tttgaaggggaagattatagagagaaacaaaagatggcattcacagagtggattgagccg
cctaaacgagaaagaaaagccaactatgctgttgatgcttacttcagggaagctcttcgt
gtcagtgaaccgaaagcaccgaaagctccacgacctccaaaacagcctaatgttcaagat
ttccagttctttcctccacgtttgtttgaactactagaaaaagagattctgtattacaga
aaaactattgggtacaaggtacctcgtaatccagacttgccaaatgctgcccaagcacaa
aaggaagaacagattaaaattgatgaagctgatccccttaatgatgaagagttagaagaa
aaggagaaactactaacccagggatttactaactggaataagagagattttaaccagttc
atcaaagctaatgaaaaatggggccgtgacgatattgaaaatatagctcgtgaagttgaa
ggaaaaaccccagaggaagtcattgagtattcagctgtgttctgggaaagatgcaatgaa
ctccaggacatagagaagatcatggctcagattgaaagaggagaagctagaattcagagg
cggattagtataaaaaaagcacttgacacaaagattggcagatacaaagcacctttccac
cagttgagaatatcatatggtactaacaaagggaagaattatacagaggaggaggatcgc
tttctaatctgtatgcttcacaagttaggatttgataaagagaatgtttatgatgaatta
agacagtgtattcgaaactctccccagttcagatttgactggttcctcaagtccagaact
gcaatggagctacagaggagatgtaataccttaattactttgattgaaagagaaaacatg
gaattggaagaaaaggagaaggcagagaagaagaaacgtggaccaaagccttcttcggca
caaaagcgtaaaatggatggtactcctgatgggcgaggcaggaaaaagaagttaaagctg
tga
DBGET
integrated database retrieval system
