Chelonoidis abingdonii (Abingdon island giant tortoise): 116829511
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Entry
116829511 CDS
T07367
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03320
PPAR signaling pathway
cabi04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
116829511 (RXRB)
03320 PPAR signaling pathway
116829511 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116829511 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cabi03310
]
116829511 (RXRB)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
116829511 (RXRB)
Nuclear receptors [BR:
cabi03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
116829511 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
116829511
NCBI-ProteinID:
XP_032644281
Ensembl:
ENSCABG00000001231
UniProt:
A0A8C0G029
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MGDRGRDCRSPDSSSLSSSPPPELSAPLHPSMISSAMTSSINSPISSLGSPFPVISSSLG
SPGLPATPSSGYGPVSSPQINSTVNLSGMHSVSSSEDVKPPLGVRGLPCHPHGGMMPGKR
LCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCIVDKRQRNRCQYCRYQ
KCLATGMKREAVQEERQRGKEKDGEGDFAGGANEEMPVEKILEAELAVEQKSDQSVDGSG
TGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSH
RSISVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL
FNPDAKGLSNPGEVELLREKVYASLESYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEH
LFFFKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccgcggccgcgactgcaggagccccgacagttcgtctctgagctcatcaccc
ccaccggagctctcggccccacttcacccctccatgatcagctcggccatgacctcctcc
atcaactcacccatcagcagtttgggctcccccttccccgtcatcagctcgtccctgggg
tcccctgggctcccagccacaccctccagcggctatggccccgtaagcagcccccagatt
aactccactgtgaacctgtcgggcatgcactccgtcagcagctcggaagacgtcaagccc
cccctgggtgtgcggggtctcccgtgccacccccacggtggcatgatgccggggaagcgc
ctctgtgccatctgtggggacagatcatcagggaagcactacggggtgtacagctgcgag
ggctgcaagggtttcttcaagcgcacgatccgcaaggacctgacgtacacgtgccgggat
aacaaggactgcatcgtggacaagcgccagcgtaaccgctgccagtactgccgctaccag
aaatgcctggccactggcatgaagagggaagcggtgcaggaggagcggcagcgggggaag
gagaaggacggcgagggggattttgcaggcggcgcaaatgaggagatgccggtggagaag
atcctggaggcagagctggctgtggagcagaaatcggaccaaagtgttgatggctctggc
actgggggcagctcgccaaacgacccggtgaccaacatctgccaggcggccgacaagcag
ctgttcacgctggtggagtgggccaagcgcatccctcacttctcggagctgcctctggat
gaccaggtcatcctgctgcgggcgggctggaacgagctgctcattgcgtccttctcgcac
cgctccatctcggtgaaggacgggatcctgctggccacagggctgcacgtgcatcgcaac
agcgcccacagcgccggcgtgggggccatcttcgacagggtgctgactgagctggtctcc
aagatgcgggacatgcggatggacaagacggagctcggctgcctccgggccatcatcctc
ttcaacccggatgccaaggggctgtcgaaccctggggaggtggagctgctgcgggagaag
gtctacgcgtctctggagtcctactgcaagcagaagtaccccgagcagcagggcaggttc
gccaagttgctgctgcgcctgccggctctgcgttccatcgggctgaagtgcttggaacat
ctcttcttcttcaagctcatcggggacacccccatcgacaccttcctcatggagatgctg
gaggccccccaccagctgtcctga
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