Chelonoidis abingdonii (Abingdon island giant tortoise): 116829530
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Entry
116829530 CDS
T07367
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116829530 (VPS52)
Membrane trafficking [BR:
cabi04131
]
Protein recycling
Others
EARP complex
116829530 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
116829530 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_CC
Vps52_C
Sec3_CC
CoV_NSP7
DUF4795
SICA_beta
Motif
Other DBs
NCBI-GeneID:
116829530
NCBI-ProteinID:
XP_032644298
Ensembl:
ENSCABG00000000975
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MSPWRPGCCGSERRSGAGMMAALRPDEELGLRVTEIEEEEGMGRGEEQSLQLNLGDLDLT
SDEFILDEVDIHIQANLEDSLVQEALKTGVDLRQYSKQVELELQHIEHASIRDYIKESKN
ITSLHNQITACDAILERMEQMLSSFQCDLSSISCEIQTLQEQSVAMNLRLKNRQAVRSQL
SQLVDELVVPAAMISTILEAPVTEQDFLEQLHELNNKMNYVKEQAFRETMACTDVHNVLD
RLKVKAVTKIREFVLQKIYSFRKPMTNYQIPQNALLKYRFFYQFLLGNERSVAQELREQY
VETMSKIYLSYFKSYTSRLMKIQYEEVAEKDDLMGVEDTAKKDILASCAWTAAFLGTLRG
GKGVLGEPPRVLGQPPGLTAGPHSSPGAGRAPRSPGSQPPALPAGPYSPPRARREPRPPA
LPRYWDTLLEILWPRFEYILELNIQSIQNTDPQRLGFLDTRPHYITRRYAEFSSAIVSIN
QTFPNERTHTLLGQLQVEVENFVLRVAAEFSSRKEQLIFLINNYDMMLSVLMERAVEESK
EVEGFQQLLSARSQEFIEEILSPPFGGMIAFVKESESLIEKGQLDRLRGEEARVTQLVRG
FSTTWKASVESLSQDVMRSFSNFKNGTSIIQGVLTQLIQYYHRFHKVLAQPPLRALPARA
ELINIHHLMVELKKHKPNF
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttggaggcccggatgttgtgggagcgaaagaaggagcggggcggggatgatg
gcggcgctgaggcccgatgaggagctggggctgcgggtgactgagatagaagaagaggag
ggcatgggccgtggagaggagcagtcgctgcagctgaacttgggggacctggacctcacc
tcagatgagttcattctggatgaagtggacattcacatccaagccaacctggaggactct
ctggttcaggaggcactgaagacaggtgtcgatctgcggcagtactccaagcaggtggaa
ctggagctgcagcacattgagcacgcctccatcagggactacatcaaggagagcaagaac
atcacctccctgcacaaccagatcaccgcctgtgacgccatcctggagcgcatggagcag
atgctgagttccttccagtgtgacctgagcagcatcagctgcgagatccagacgctgcag
gagcagtcggtggccatgaacctgcggctcaagaaccgccaggctgtgcgtagccagctc
agccagctggtggacgagctcgtggtgccagctgccatgatcagcaccatcctggaggcc
ccggtgactgagcaggacttcttggagcagctgcacgagctgaacaacaagatgaactat
gtgaaggagcaggccttccgcgagaccatggcctgcaccgacgtgcacaacgtgctggac
cggctgaaggtcaaggctgtgaccaagatccgggagttcgttctacagaaaatctactcg
ttccgcaaaccgatgaccaactaccagatcccccagaatgccctgctcaagtacaggttc
ttctaccagttcctgcttgggaacgagcggtcggtggcacaggagctgcgggagcagtat
gtggagaccatgagcaagatctacctgtcctacttcaaatcctacaccagccgcctcatg
aagatccagtacgaggaggtggcggaaaaggacgacctgatgggagtggaggacacggcc
aagaaagatatcctggcttcctgtgcctggacagctgcattcctaggcactctgcgggga
gggaaaggggtgctgggagagcctcccagagtcctgggtcagccccctggtctgaccgct
gggccccactcctcacctggcgctgggagagcccccaggagtcctggctcccagccccct
gctctgcccgctgggccctacagcccgcccagagccaggagagaacccaggcctccggct
ctccccaggtactgggacacgctgctggagatcctgtggccgcggtttgagtacatccta
gagctgaacatccagagcatccagaacacggacccccagagactgggcttcctggacacg
cgcccccactatatcacacggcgctatgcagagttctcttctgccatcgtcagcatcaac
cagaccttccccaacgagcgaacccacacgctgctggggcagctccaggtggaagtggag
aacttcgtgctgcgggtggcggctgagttctcatcgcgcaaggagcagctcatcttcctc
atcaacaactatgacatgatgctgagcgtcctcatggagcgggcggtggaggagagcaag
gaggtggagggcttccagcagctgctttcagcccgctcccaggagttcatcgaggagatc
ctgtcgcccccgttcggggggatgattgccttcgtcaaggagtcggagtcactcattgag
aaggggcagctcgaccggctgcgtggggaggaggcccgggtgacccagctggtgcgcgga
ttctccaccacgtggaaggcctcggtggaatcgctgagccaggacgtgatgagatccttc
agcaacttcaaaaatgggaccagcatcattcagggggtgctgacccagctgatccagtac
tatcaccgcttccacaaggtgctggcgcagccgcccctgcgcgccctgccggcccgcgcc
gagctcatcaacatccaccacctcatggtggagctgaagaaacacaagcccaacttctag
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