Chelonoidis abingdonii (Abingdon island giant tortoise): 116829547
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Entry
116829547 CDS
T07367
Symbol
NEO1
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04350
TGF-beta signaling pathway
cabi04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116829547 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116829547 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116829547 (NEO1)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
DCC/UNC5 family
116829547 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
Ig_Rha78A_N
C2-set_2
fn3_2
TMEM154
TM_ErbB1
EphA2_TM
GBS104-like_Ig
Neur_chan_memb
FAM176
Motif
Other DBs
NCBI-GeneID:
116829547
NCBI-ProteinID:
XP_032644305
Ensembl:
ENSCABG00000001922
LinkDB
All DBs
Position
Unknown
AA seq
1425 aa
AA seq
DB search
MGKDEIGSTVRTFTPFYFLVEPVDTLSVRGAFIILNCSAYCEPSPKIEWKKDGTFLNLVS
DDRRQLLPDGSLLINSVVHSKHNKPDEGYYQCVATVESLGTIVSRTAKLTVAGLPRFTSQ
PESTSVYRGNSVILNCEVSADLVPFVRWEQDRQPLFLDDHVFTLPSGALIMSNVTDEDGG
LYRCIIESGGSPKYSDEAELKILPDPEVPLNLVFLRQPSSLTKVTGQSAVFPCVTAGFPT
PVVRWMKNEEELTIEGSEKFLLLAGGSLEISDITEDDAGTYACIVDNGNETIEAQADLTV
QAPPEFLKQPDNIYAHESMDIVFECEVTGKPTPTVKWIKNGDMVIPSDYFKIVKEHNLQV
LGLVKSDEGFYQCIAENDVGNAQAGAQLIILEHDVAIPTLPPTSLTSATTDHLAPATTGP
LPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYTVFYTKEGINRERIENTSRPGEMQ
VTIQNLMPETVYVFRVVAQNKHGPGESSVPLKVATQPEVQLPGPAPNIRAYANSPTSITV
TWDTPLSGNGEIQNYKLYYMEKGTDNEQDVDVGGHSYAINGLKKYTEYSFRVVAYNKHGP
GVSTQDVVVQTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPPAGTHNGLITGYKIRYRKAS
RKSEVTESIGGTQLFQLIEGLERGTEYSFRVAALTSNGTGPATDWISAETFESDLDETRV
PEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIEN
LDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTVPDPSPMMPPVGVQASILSHDTIRITW
ADNSLPKNQKITDARYYTVRWKTNIPANTKYKTANTTTLSYLVTSLKPNTLYEFSVMVTK
GRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYY
STDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKA
ESSDKMPNDQALGSSGKGSRPLDIGPDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSVGV
ITIVIVVIVAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKP
IDKSPDPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMR
PKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSGSLASPTGSYLHHQVNPWPIGTAMSHS
DRANSTESVRNTPSTDTMPASSSQTCCADHQEPESATASYLANTQEEDSGQSLPTAHVRP
SHPLKSFAVPAVPPTGSTYDPALPSTPLLTQQASNHPVHSVKTASIGTLGRTRPPMPVVV
PSAPDVQETTRMLEDSESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggatgaaatagggtccaccgtgagaaccttcactccgttttattttcttgtg
gagccagtggacacgttatcagttcgaggggcttttatcatactgaactgttcagcttac
tgtgagccttctccaaaaattgaatggaagaaagatgggactttcctaaatttggtgtca
gatgaccggcgccagctgctgccagatggatctttattaataaacagtgtggtgcattcc
aaacacaataaacctgacgaaggatattatcaatgtgtggcaactgtggaaagtcttggg
accattgtaagcagaacagcaaagcttacagtagcaggacttccaaggttcactagccag
ccagaatcaacatctgtctatagaggaaacagcgtaattctgaactgcgaggtcagtgct
gatctggtaccatttgtgaggtgggagcaggatcgtcagccactctttttggatgaccat
gtattcacattaccaagtggagctctaatcatgagcaatgttacagatgaggatggagga
ctctatcgctgcatcattgaaagtggtgggtcgcccaaatacagtgatgaagcagagctt
aaaattcttccagatccagaggttccattaaacctggtgttcctgaggcaaccttcttca
cttactaaagttactgggcaaagtgcagttttcccatgtgtcactgcaggatttccaact
ccagttgtcaggtggatgaaaaatgaagaagaacttaccatagaaggctctgaaaaattt
ctgttactggcgggagggagcctggagatcagtgatatcacagaagatgatgctgggaca
tatgcctgcattgtggataatgggaatgagacaattgaagctcaagcagatcttacagtt
caagctccacctgaatttctgaagcagcctgataatatttatgctcatgaatctatggat
attgtctttgaatgtgaagtgactggaaaaccaactccaacagtgaaatggatcaagaat
ggagatatggtgatccctagtgactacttcaaaattgtaaaggagcataacctgcaggtt
ttgggtcttgtgaaatcagatgaaggattctatcaatgcattgcagaaaatgatgttgga
aatgcacaggctggagcccagctgataatacttgaacatgatgttgccatcccaacatta
cctcccacttcactgaccagtgccactactgaccatctagcaccagctacaactggacca
ttgccttcagctcctcgggatgtcgtggcctccctcgtctctactcgcttcattaaactg
acgtggcggacaccagcatcagatcctcatggagacaacctcacctatacagtattctac
accaaggaaggtataaacagggaacgtattgaaaatacaagtcgtcctggagagatgcaa
gtgaccatccaaaacctgatgccagagaccgtgtatgttttcagggttgtggctcaaaac
aaacatggccctggagagagctcagtgccactgaaggtggcgactcagcctgaagttcaa
cttcctggtccagcaccgaacattcgagcatatgctaattcacccacttcaatcactgtc
acatgggacacaccgctgtcgggcaatggtgaaatccagaactacaagctctattacatg
gaaaaggggacagataatgaacaggatgttgatgttggaggtcactcctacgccattaat
ggattaaagaaatataccgagtacagcttccgagtggtagcctacaataaacacggtcct
ggagtctctacccaagatgttgttgtgcaaactctgtcagatgtccccagtgctgcaccc
cagaatctgtcgctggaagtgcggaattccaagagcatcatgatacattggcaaccccct
cctgcaggaacacacaacggtctaatcactggctacaaaattcgctaccgtaaagcatct
cgtaagagtgaggtaaccgagagcattggtgggacgcaacttttccagctaattgaaggt
cttgaacgaggtacagaatacagtttccgtgtggctgccttaacaagcaatggtacagga
ccagctactgattggatatcagctgaaacttttgagagtgacctagatgaaactcgtgtt
cctgaagttccaagctccctacatgttcgcccacttgttacaagtattgtagtgagctgg
actcctcctgaaaaccagaacattgtggtaagaggatatgctatagggtatggcattggc
agtcctcatgcacagactatcaaagtggactacaaacagcgctattacaccattgagaat
ttggatccaagttcccactatgtcataactctgaaagcatttaacaatgttggtgaagga
atcccactctatgaaagtgcagtgaccaggcctcatacagtgccagatccctcccccatg
atgccaccggtgggagttcaggcttccattctgagccatgacaccataaggatcacttgg
gcagacaactctctgccgaaaaatcagaaaatcacagatgctcgctactacacggtccgc
tggaaaacaaacattcctgcaaacacgaagtacaagactgcaaatacaaccactttgagc
tatttagtgaccagtttaaaaccaaacaccttgtatgaattctctgtgatggtgactaaa
ggtcgaagatcaagtacttggagtatgacagctcatgggactacctttgaattagttcct
acgtctccaccaaaagatgtgactgtggtgagcaaagagggaaaacctaggacaataatt
gtaaactggcagccaccgtctgaagccaatggcaaaattacaggatacatcatttactac
agcacagatgtgaatgctgagatacatgattgggtcattgagcctgtggtgggaaacaga
ttgacacaccagatccaagagttaacccttgatacgccatattatttcaaaatccaggcc
cgcaactcaaagggcatggggcctatgtcggaggcagtacagttcagaacacccaaagct
gaatcctcagataaaatgcctaatgatcaagcattagggtcttctggaaaaggaagtcgg
ccactggatataggacctgactacaaaccacccatgagtggcagtaacagtcctcatgga
agccccacatcccccctggatagcaacatgcttctagtcataatagtatctgttggagtg
atcaccattgtgatagtcgtgattgttgctgtcttctgcactcgtcgcaccacctctcac
cagaaaaagaaacgggctgcctgcaaatcagtgaatgggtcccataaatacaaaggaaat
tccaaggatgtcaaaccccctgacctttggatccatcatgagagactggagctgaaaccc
attgataaatctccagaccctaaccccatcatgacagacaccccaatccctcgcaactcc
caggacatcacaccagttgacaattccatggatagcaatatccatcaaaggcgcaactca
tacaggggccatgagtcagaggacagcatgtccacattggcaggaagaagagggatgagg
ccaaaaatgatgatgccatttgattctcagcccccgcagcctgtgattagcgctcatccc
atccattcactcgataaccctcaccatcatttccactccggcagcctcgcttctccaact
ggcagctatctccatcatcaggtcaacccttggccgattggcacagccatgtcccattca
gacagggccaattccacagaatctgttcgaaatacaccaagcacagacaccatgccggct
tcctcatctcagacatgttgtgctgaccatcaagagccagaaagtgccacagcatcttat
ctggccaacacacaggaggaggattcaggtcaaagtctccctactgcccacgtccgtccc
tctcaccctctgaagagctttgcagtgccagcagttccacccacaggttccacatatgac
ccagcgttgccaagcacaccgttattgacacagcaagcttctaaccatccagttcactcg
gtgaagactgcgtcgatcgggactttagggagaactcgaccgcctatgccagtggtagtg
cccagtgcccccgatgtgcaggagaccaccaggatgcttgaggactcagaaagtaactat
gaaccggatgagctgaccaaagagatggcccacctggaaggactaatgaaggaccttaat
gccatcactacagcatga
DBGET
integrated database retrieval system
