Chelonoidis abingdonii (Abingdon island giant tortoise): 116829559
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Entry
116829559 CDS
T07367
Symbol
CNTN5
Name
(RefSeq) contactin-5
KO
K06761
contactin 3/4/5/6
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116829559 (CNTN5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cabi00537
]
116829559 (CNTN5)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
Contactins
116829559 (CNTN5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cabi00537
]
Others
116829559 (CNTN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
Ig_5
Ig_SEMA-3_4_7A
Ig_4
Zwei_Ig_N
Pur_ac_phosph_N
C2-set
Motif
Other DBs
NCBI-GeneID:
116829559
NCBI-ProteinID:
XP_074917822
LinkDB
All DBs
Position
1:complement(342931293..344009839)
Genome browser
AA seq
1100 aa
AA seq
DB search
MMWSSWRLILFLSLTGCLSEYSAAVPGLPTSYAAILRIKSASSSSALFNSKNRPRLSSPS
LGSMSSPGWRGTAQHYRSPTNLYHFSEAFKHDESVDYGPVFVQEPDDVIFPTDSEEKKVS
LNCQARGNPAPIYRWLRNGTEIDIESDYRYSLIEGSFIISNPNEAKDSGQYQCLTTNVFG
SILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLLCSPPLHSPEIIYSWVFNEFPSFVA
EDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEP
KIEVHFPYTVTAAKGTTVKMECFALGNPVPTISWRKVNDHNPSKARLRKSQAVLEIPNVQ
LEDAGMYECKAENSRGRNVFRGQLQVYTYPHWVEKLNNTQLDSGEQLRWECQATGKPRPT
YRWLKNGVPLWAQSRVEMVNGVLMIHSVNLSDAGMYQCLAENKYGTIYASAELKILASAP
TFALNQMKKTIIITRGQEVVIECKPQASPKPTITWKKGDKAVRENKRITVLPDGSLQILN
ASKSDEGRYLCQGENVFGSAETVASVLVKEPTRIDLTPKRTELTVGESIVLSCKAIHDNT
LDVTFCWTLNGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVS
DEAELLVRGPPGPPGIVIVEEITETTATLSWSPGADNHSPISTYNLQARSPFSLGWQTVK
TVPENISGDMESAVAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTSEAVPKTAPANV
SGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSDASKFIYRDES
VPPLTPFEVKVGVYNNKGDGPFSNIVVICSAEGEPSAAPTDVKATGLSVSEILVAWKHIK
ESLGRPQGFEVGYWKDMEQEEASEKVKTEGNESSIILTGLEGNTLYHLTVRAYNAAGYGP
PSSTVRAATKKSPPSQAPTNIMWMQDGSHVSLGWEPVRPLANESDVMGYKVLFRQEGHSN
SQVIETQKTSAVVLLPDVGVYIIEVCAVSEGGDGTASSQIRVPSFSGGKVTSAQSTLHAF
STSSSSVTLLLALMVPSTSW
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggtcttcatggagactgattctgtttctatcactcactgggtgtctttcagaa
tattcagcagctgttccaggcctcccaacatcatatgctgctatcctaagaattaaatct
gccagttcatcttcagcactctttaattcaaagaacaggccacgattaagcagcccttca
ttaggaagcatgtcttcaccaggctggagaggaacagcacaacactatcgctcaccaaca
aacctctatcacttctcagaggccttcaaacatgatgaaagtgttgattacgggccggtg
tttgtgcaagagccagatgatgtgattttccctactgattctgaagagaagaaagtgtct
ctgaattgtcaagcacgaggaaaccctgctcctatttacagatggctacgaaatggaact
gaaattgatattgaaagtgattatcgctacagtttgatagaaggaagttttatcatcagc
aatcccaatgaagcaaaggattctgggcaatatcaatgtttaaccaccaacgtgtttgga
agtattttgagcagagaggccacccttcagtttgcatatctgggaaattttagtggccgg
acaagaagtgcagtctctgtacgagaaggtcaaggagttgttctgttgtgctctcctcca
cttcattcaccagagatcatttacagctgggtatttaatgaattcccatctttcgtggca
gaagatagccgacgctttatctctcaggagacaggaaatctctacatatccaaggtgcaa
acatctgatgttggcagctatatctgcctagtaaaaaacacagtgacaaatgccagagtt
ctgagtcctccaacgccacttaccctgcgaaacgatggtgtgatgggggaatatgagccg
aaaattgaggtccattttccttatacagttacagctgcaaagggaactaccgttaagatg
gagtgctttgcgctgggcaaccctgttccaacaatctcatggaggaaagttaatgatcat
aatccaagtaaagcccgtctgagaaagtcccaagctgttcttgaaatacctaatgtgcag
ctagaagatgcagggatgtatgaatgtaaagctgaaaactcgcgtggaaggaatgtcttc
agaggacagctacaagtgtacacctacccacattgggtggagaagcttaacaatactcag
ttagacagtggagagcagcttcgatgggaatgccaagccactggaaagccacgacccacc
tatcgttggctgaagaatggagtacctctttgggcacagagcagggttgagatggttaat
ggtgtactgatgatccacagtgtgaatctctcagatgctggaatgtaccaatgcttagca
gaaaataaatacggaaccatttatgccagtgctgagctgaagattttagcctcagctccc
acttttgcactgaatcagatgaagaaaactataattattaccaggggccaagaagttgtc
attgagtgcaaaccacaagcctctccaaaaccaaccatcacttggaagaaaggagacaaa
gcagtaagagagaataagaggataactgttcttccagatgggagcctacaaatcctgaat
gcttccaaatctgacgaaggaaggtacttatgccaaggagaaaatgtgtttggttctgca
gaaactgtagcctcagtattggttaaagaaccaacacggatagacctgactcccaagagg
actgagttaaccgttggagaaagcattgtcctcagttgcaaagccattcatgacaacaca
ctagatgtcactttctgctggactttgaatgggcagccaattgattttgagaaggaaggc
ggacactttgaaagcatcagggcacaagcatcctctgcagatttaatgatcaggaacatc
cttctgatgcatgctgggagatatggctgcagggtacagaccacagcagacagtgtgtca
gatgaggcagaacttcttgttaggggtcctcctggtcccccaggaatagtgatagttgag
gaaattacagaaacaacggcgacgctctcctggagtcctggggcagacaaccacagccct
atctccacatacaacttacaagcacgtagcccattttcacttggctggcagaccgtaaaa
acagttccagagaacataagtggtgacatggaatctgctgtggcagtagaactgaaccca
tgggtggaatatgaattcagagttgtagcaaccaacaaaatcgggactggggatcccagt
gcaccatctcgagtgatcagaaccagtgaagcagttccaaagacagcaccagctaatgta
agtggaagaagtggaagacggcatgaattagtaatagcatgggagccagtatcagaagag
tttcagaatggagaaggatttggatacattgtggcttttagaccaaatggaacacgaggg
tggaaagaaaaaatggtgacatcctcagatgcttcaaagttcatctatagggatgaaagt
gtgccacctctgactccctttgaggtgaaagttggtgtatataataacaaaggagatgga
cccttcagcaacattgtggtcatctgttcagctgagggagaacccagtgcggctcctact
gatgtcaaggctacaggattgtctgtatcagagattctggttgcgtggaaacatattaaa
gaaagtctaggaagaccacagggatttgaggttggttactggaaagatatggagcaggaa
gaagcatcagaaaaagtcaaaactgaaggaaatgagtcgtccatcattttgacaggatta
gaaggaaacacattatatcacctaacagtgagggcgtacaatgctgcaggatatggacca
ccgagtagcacagtccgtgcagccaccaagaaatcccctcccagccaggcaccaaccaat
attatgtggatgcaagatgggtctcatgtgtctctgggatgggaaccagttagacctcta
gcaaatgaatctgatgtaatgggatacaaggtcttgtttaggcaagaaggccacagcaat
agtcaagtaattgaaacacagaaaacctctgccgtggtacttcttcctgatgttggtgtc
tatatcatagaggtttgtgcagtcagtgaaggaggggatgggacagccagctcccaaatc
agagtaccatctttttcaggtggaaaagttacaagcgctcaatccactttacatgctttc
tctacttcctcatcatctgtaacattgctcttggcactgatggtcccttccacctcatgg
tga
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integrated database retrieval system
