Chelonoidis abingdonii (Abingdon island giant tortoise): 116829728
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Entry
116829728 CDS
T07367
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116829728 (SUPT6H)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116829728 (SUPT6H)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116829728 (SUPT6H)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
116829728 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
116829728
NCBI-ProteinID:
XP_032644591
LinkDB
All DBs
Position
20:complement(23432422..23472361)
Genome browser
AA seq
1725 aa
AA seq
DB search
MSDFVESEAEESEEEYNDDGEVVPRVNKKFVEEEDDEEEEEENLDDQDEQGNLKGFINDD
DDEEEEEEEEASDSGDSEDDVGHKKRKRSKLSFDDRLEDDDFDLIEENLGVKVKRQKFRR
VRKMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVDAPIAPPEEEEEDEEDES
DIDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEE
YEYEDEEAEGEIRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRVTDMPERFQ
LRSIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLERGQASSSFSRKGPSTIQKI
KEALNFLRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEK
MQAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQ
NAAKASRKKHKRIREDGEEAEGEGEDAEDEEQKGPELKQASRRDMYTICQTAGLDGLAKK
FGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAR
EPLVRQVLRQTFQERAKLNIAPTKKGKKDVDEAHYAYSCKYLKNKPVKELRDDQFLKICL
AEEEGLLSIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLN
QFLYVQMAKELKNKLLVEAKEYVIKACSRKLYNWLKVFPYRPDQQVEEDDDFMDENQGKG
IRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEERDKKAQDIETLKK
FLLNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSRK
SENEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNAL
YCEFINRVNEVGVDVNRAIAHPYSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLV
TMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDE
SAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLR
TPYRSPNTEEVFNMLTKETPETFYIGKMITCNVTGIAHRRPQGESYDQAIRNDETGLWQC
PFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVK
VGMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDYKR
KQQRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIY
QHVDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCSGG
DRKKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRG
QIFPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQN
MTSQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMT
PSYSYTTPSQPITTPQYHQLQASTTPQSTQSQPSSSSRQRQQPKSNSHAAIDWGKMAEQW
LQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggagagcgaggctgaggagtcggaggaggaatacaacgatgatggg
gaggttgttccaagagtaaacaagaagtttgtagaagaggaagatgatgaggaggaggag
gaggagaatcttgatgatcaagatgagcaggggaacctaaagggattcattaatgatgat
gatgatgaggaagaggaggaagaggaagaggcaagcgactctggcgattcggaggacgat
gttggccacaaaaagagaaaacgcagtaagttgtctttcgatgaccgtctggaggatgac
gattttgacctcattgaagagaacttgggtgtcaaagtcaaaagacaaaaattcaggcgt
gtgcgaaaaatgtcagatgatgaggatgatgaagaggaggattatgggaaggaggaacat
gagaaggaagccattgctgaagaaatcttccaggatggggaaggggaagagggaggcgag
gctgtcgatgctcccatagctcctccagaagaggaggaagaggacgaggaagatgaatct
gacattgacgacttcattgtggatgatgatggccaacctctgaagaagccaaagtggcgg
aagaaactccctggctacacagatgctgctttgcaagaggctcaggagatcttcggagtg
gactttgactatgatgaatttgagaagtacaatgaatatgatgaggagctggaggaggaa
tatgagtacgaggatgaggaggccgaaggggagatccgcgtccgacccaaaaagactgcc
aagaagcgcgtcagtcgacgtagcatctttgagatgtacgagcccagtgagctggagagc
agtcacctgacagaccaggacaatgagatccgtgtgaccgacatgccagagaggttccag
ctgcgctccatccctgtgaagagtgctgaagatgatgagttggaggaagaagctgactgg
atctacaggaatgcctttgccacacctaccatctccctgcaggaaagttctgattacttg
gagcggggccaggccagtagcagcttcagccgcaaggggcccagcaccatacagaagatt
aaagaagccctgaacttcctgaggaatcagcacttcgaggtcccattcatcgccttctac
cgaaaggagtacgtcgagccggagctgcacatcaatgacctctggagggtctggcagtgg
gatgagaagtggacccagctaaagatccgcaagcagaacctgacccgtctgtttgagaag
atgcaggcctatcagtatgagcaaatctctgctgatccagacaaacctttggctgatggg
ataagggcgcttgataccactgacatggagaggctgaaggacgtgcagtccatggatgaa
ctgaaggacgtgtataaccatttcttgctgtactacgggcgagacatccctaagatgcag
aatgctgccaaagccagccgaaagaagcacaagcgaatccgggaggatggtgaagaggcg
gaaggtgaaggagaggatgcagaagatgaagagcagaaggggcctgagctgaagcaggca
tcccgcagggatatgtataccatctgtcaaaccgctgggctggacggcctggctaagaag
tttggtctgacgcctgagcagtttggagagaatcttcgtgacagttaccagcgtcatgag
actgagcagttcccagcagagccgctggagctggccaaggattacgtgtgtagtcaattc
ccaacccctgaggctgtgctggaaggagcccgctacatggtggccttgcagatagcccgg
gagccgctcgtcaggcaggtcttgagacagactttccaagagagagccaaactcaacatt
gcacccaccaagaagggtaaaaaggatgtggatgaagcccattatgcgtattcctgtaag
tacctgaagaacaagcccgtgaaggagctgcgagatgaccagtttctgaaaatctgcctg
gctgaggaggaggggctgctgagtattgacatcagtattgacatgaaaggtgtcgagggt
tatgggagtgaccagacgtattttgaggaaatcaagcagttctattaccgcgacgagttc
agccaccaggtgcaggagtggaatcgtcagcgcacgatggccatcgagcgttcccttaac
cagttcctctatgtgcagatggctaaagaactgaagaacaagctgctggtggaggccaaa
gagtacgtcattaaggcttgcagccgaaagctgtacaactggctaaaggtgtttccctac
cgtccagaccagcaggtggaggaagacgatgatttcatggatgaaaatcaggggaaggga
attcgggtgctgggcattgcattctcctccgctagagaccaccccgtgttctgtgccctg
gttaatggtgagggcgaggttacagacttcctccggctgccacacttcaccaagagacgg
aatgcctggcgggaggaggagcgggacaagaaggcccaggatatcgaaactctgaaaaaa
ttccttctgaacaagaagcctcatgtggtgacaattgcaggagagaacagagatgcccag
atgttgatggaggacgtcaagcggattgtgcatgaactggatcaggggcagcagctgtct
tccattggggtggagctagtggacaatgagctggccattctctacatgaacagcaggaag
tcagagaatgagttccgggattacccccctgtgctgcgccaagccgtctccctggctcgc
cgtattcaggaccccctgatagagtttgctcaggtctgcagctctgatgaggatatcctg
tgtctgaagcttcaccctctgcaggaacacgtggtgaaggaggagctgctgaatgccctc
tactgcgagttcataaaccgtgtgaatgaggtgggagtggacgtcaatcgggcaattgct
cacccttacagccaggccctgctacagtatgtttgtggtctagggccacgcaaagggact
cacctgctcaagatcctgaaacaaaacaacacaaggctggagaaccggacacagctagtc
actatgtgtcacatgggacccaaagtcttcatcaattgtgctggtttcatcaaaattgac
acagcatcactgggtgacagcacggattcctacattgaggtcctagatgggtccagagtc
caccctgaaacctatgaatgggcaagaaaaatggcagtggatgccctagagtacgacgaa
tcggcagaggatgccaatccagctggagctctagaggagatcctggaaaacccagagcgt
ctgaaagacctggatcttgatgcctttgctgaagagctggagagacagggttacggtgac
aaacacatcactctgtatgacatccgagctgagctgagctgcagatacaaggatctgaga
accccgtaccgttctcctaacacagaggaggtcttcaatatgctgaccaaagaaacacca
gagactttctacataggcaaaatgattacctgcaacgtgactggaatagcccataggagg
ccccagggcgaaagctacgatcaggccatacggaatgacgagactggcctctggcagtgt
ccgttctgtcagcaggataacttcccagagctcagcgaggtttggaatcactttgacagt
ggctcctgccctggccaggctattggggtgaagacacggctggacaatggggtcactggc
tttataccaaccaagtttctcagtgacaaggtggttaagcggccagaagaaagggtgaag
gtgggaatgactgttcactgtaggatcatgaagatagacattgagaagttcagtgcagac
ctgacctgcaggacgtcagacctgatggataagaacaatgaatggaagctgcccaaagac
acttactatgactttgatgctgaggcagcagatcacaaacaggaagaagactacaagagg
aagcagcagcggacaacatacatcaagagggtgatcgctcacccgtcattccataacatc
agcttcaagcaagctgagaagatgatggagaccatggaccaaggcgatgtgatcatccgg
ccaagcagcaagggggagaaccacctgactgtcacctggaaggtgaacgatgggatttac
caacatgtggatgtccgagaggagggaaaggagaacgccttcagtttgggctccaccctt
tggattaacacagaggaatttgaggacctggatgaaatcgtcgcacgctatgtccagcca
atggcatcttttgctagagacctgctaagtcacaaatactaccaagactgcagtggtgga
gacaggaagaaactggaagaacttctaataaagaccaaaaaggagaagccgacctttatt
ccttactttatctgtgcctgtaaagagctacctggcaaattccttctgggataccagcct
cgagggaaaccgaggatagagtatgtgacggtaacaccagagggattccggtaccgggga
cagatcttccctacggtgaatgggctcttccggtggtttaaggatcattatcaggaccca
gtgccaggtatcacccccagcagcagcagcaggacccggaccccagcctccatcaatgct
actcctgctaacattaacctagcggatctgacccgagccgtgaacgcgctgcctcagaac
atgacctcgcagatgttcagtgccatcgcagcggtgacaggccaagggcagaaccccaat
gccactcctgcacagtgggcatctagccagtatggctatggaggcagcggaggtggcagc
agcgcatatcatgtcttcacaactccagcacagcagccagtggccacccctctgatgacc
cccagctactcctacacaacccccagccagccaattacaacacctcagtatcatcagctc
caggccagtactactccccagtccacccagtcgcagccatcatccagttccaggcagagg
cagcagccgaagtccaacagccacgctgcaatcgactgggggaaaatggctgagcagtgg
ctccaggagaaggaggctgagcggaggaaacagaagcagaggctgacccctcgtccatct
cccagccccatgatcgagagcacgcccatgtccattgctggggacgccacaccgcttttg
gatgaaatggatcgatag
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integrated database retrieval system
