Chelonoidis abingdonii (Abingdon island giant tortoise): 116829890
Help
Entry
116829890 CDS
T07367
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116829890 (SMARCE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116829890 (SMARCE1)
03021 Transcription machinery [BR:
cabi03021
]
116829890 (SMARCE1)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116829890 (SMARCE1)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
116829890 (SMARCE1)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116829890 (SMARCE1)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116829890 (SMARCE1)
PBAF complex
116829890 (SMARCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Sarcoglycan_2
Motif
Other DBs
NCBI-GeneID:
116829890
NCBI-ProteinID:
XP_032644858
Ensembl:
ENSCABG00000011346
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MSKRPSYAPPPTPAPTTQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTVGESTITS
SGKQQELTRNGFRASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKI
IGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVV
TTARMQVLKRQVQSLMVHQRKLEAELLQIEERHQEKKRKFLESTESFNNELKRLCSLKVE
VDMEKIAAEIAQAEEQARKRQEEREKEAAEQAERSQTNAAPEEEQAVNKTEEKKEEESAP
METEEAHPEETTENQQNGEEGTSTPEDKESGQEGVDSTAEEGTSDSNTGSESNSATVEEP
PADPAPEDITVSQEGKGRWFLHALKCHVHISK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggccatcctatgccccacctcccacccctgctcccacaacccaaatgccc
agcacgccagggtttgtgggatacaatccatacagccatctggcctacaacaactacagg
ctgggagggaacccgggcaccaacagccgggtcacggtaggagaatcaactattacatca
tccggcaaacaacaggaattgaccagaaatggctttagagcttcctctggtattacaatt
cccaaacccccaaagccaccagataagcctctgatgccctacatgaggtacagcaggaag
gtctgggatcaagtgaaggcatccaaccctgacttgaagttatgggaaattggcaagatc
attggagggatgtggcgagatctcactgatgaggaaaaacaagagtacttgaatgaatat
gaagcagaaaagatagagtacaatgaatccatgaaggcctaccataactcaccagcttac
cttgcctacatcaacgcaaagagtcgggctgaggcagcgttagaagaagaaagccgacaa
aggcaatcacgcatggagaaaggtgaaccctatatgagcatccagccagcagaagaccca
gatgattatgatgatggattttctatgaagcacacagctacagcccgcttccagaggaac
caccgtctgattagtgagatactgagtgaaagtgtggtaccagacgtccgctccgttgtc
actacagctagaatgcaagttctcaaacgtcaagttcagtctttaatggttcatcagcga
aaactggaagctgagcttctgcaaatagaagagcgccaccaggaaaagaagaggaagttc
ttggaaagcacagaatcctttaacaatgaattgaagaggttatgcagtttgaaggtggag
gtggacatggaaaaaatagcagctgaaattgctcaggctgaggaacaggcccgcaagagg
caggaggaaagggaaaaagaagcagctgagcaagctgaacgcagtcagacaaatgcagca
cctgaggaagagcaagcagttaacaagacagaggagaagaaggaagaagagagcgctccc
atggagacagaggaggctcacccagaagaaactacagagaaccagcagaacggtgaagaa
ggaacatccacaccagaagataaggagagtggccaggaaggggttgacagtactgcagag
gaaggaactagtgatagtaacactggttcagagagcaatagcgcaacagttgaggagcct
ccagcagaccctgcccccgaggatataactgtttcacaagagggaaaaggcaggtggttc
ttgcatgctctgaagtgtcatgtgcatatttccaaatga
DBGET
integrated database retrieval system
