Chelonoidis abingdonii (Abingdon island giant tortoise): 116830018
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Entry
116830018 CDS
T07367
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04137
Mitophagy - animal
cabi04140
Autophagy - animal
cabi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116830018 (HIF1A)
04137 Mitophagy - animal
116830018 (HIF1A)
04148 Efferocytosis
116830018 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116830018 (HIF1A)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116830018 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DUF2121
Motif
Other DBs
NCBI-GeneID:
116830018
NCBI-ProteinID:
XP_032645083
Ensembl:
ENSCABG00000016275
UniProt:
A0A8C0HCZ6
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MELTGEKKRISSDRRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLT
ISYLRMRKLLDASDLETEAKMEKEMNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLT
QFELTGHSVFDFTHPCDHEELREMLTHRNGPTKKGKELNTERSFFLRMKCTLTSRGRTVN
IKSATWKVLHCTGHVRVYDTCNNQTLCGYKKPPMTCLVLICVPIPHPSNIEVPLDSKTFL
SRHSLDMKFSYCDERITELMGYEPEELLGHSIYEYYHALDSDHLTKTHHDMFTKGQVTTG
QYRMLAKHGGYVWVETQATVIYSTKNSQPQCIVCVNYVLSEIVQKELFLSLAQTECVLKP
VESPDMKIFSKADLEDTNSLFEKLKKEPDALTLLAPAPGDTIISLDFSSNESDEQQYDEV
PLYNDVMLPSSSEKLKNITLAMSPLPASEITKPLRSNADPALNREVVSKLEPNTEPLELA
FSSRRRQEQPASPSDASTNQSSPEPCSPNDYCFDVDNDMANEFKLELVEKLFAIDTEAKN
PFTTQETDLDLEMLAPYIPMDDDFQLRSFDQPPSLDSGCASSQSVATSTIFQQTHTLSPV
AEEITPVKTECMDDIKTLIVSQSPVLIINETNSAPPSPYGGNRSRTASPIRAGKGTLDQT
EKSYPGTPNLLTVTLSKRSAAMDEELNPKMLALHNSQRKRKMEYDGSLFQAVGIGSLFQQ
LEDCGANASLCWKRVKGCKSNGQNGVGQKTIILLSTDIASKLLGQSMDETGLPQLTSYDC
EVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaccggcgagaagaaaaggattagttcagatcgcagaaaggagaagtctaga
gatgcagccagatgccgaagaagcaaggaatctgaggtcttctatgaacttgctcaccag
ctgcctcttcctcatactgtcagcgcacaccttgacaaggcctccattatgaggctgact
atcagctacttacgcatgagaaagctgttagatgcaagtgacctggagacagaagccaaa
atggagaaggagatgaattgcttttacttaaaagccctcgatggatttgtcatggttctt
tctgaggatggtgacatgatttacatgtctgaaaatgtgaacaagtgtatggggctcact
cagtttgagctgactgggcatagtgtgtttgattttacccacccatgtgatcatgaagag
ctgagagaaatgcttacgcacagaaatggtcctacgaaaaagggcaaagaactgaataca
gagcgtagctttttcctcagaatgaagtgtacactgaccagcaggggaaggacagtgaat
ataaagtctgcaacctggaaggtacttcattgtacagggcatgttcgtgtgtatgatacc
tgcaataatcagactctctgtggatataaaaagcctcccatgacatgcttggtgttgatt
tgtgtacctatccctcatccatcaaacattgaagtccctttggacagcaagacattcctt
agtcgccacagcctggatatgaaattttcgtattgtgatgaaagaattacagagctgatg
ggatatgagccagaagaactcttgggtcactccatctatgaatactaccatgctctggac
tctgatcatctgaccaaaactcatcatgatatgttcactaaagggcaagtgactacagga
cagtaccgaatgcttgctaaacatggtggatatgtctgggttgaaactcaagcaactgtt
atatacagcactaagaactcccaaccacagtgcatagtgtgcgtaaattacgtcttaagt
gaaattgtacagaaggagttatttctttcccttgcacaaactgagtgtgtgctgaaacca
gtggagtctcctgatatgaaaatattcagcaaggctgacctagaagatactaacagcctc
tttgaaaaacttaaaaaggaaccagatgctttaactttgctcgcaccagctcctggagac
acgattatctctttagatttcagcagcaatgagtctgatgagcaacaatatgatgaagtt
cctttgtataatgatgtaatgctcccctcatccagtgagaaactgaagaatataactttg
gcaatgtccccacttcctgcctctgaaattacaaagccacttcgtagcaatgctgaccct
gcactcaatagagaagttgtatcaaaactggagccaaacacagagccactggaacttgcg
ttttccagtcgccgtaggcaagaacagccagccagcccttctgatgcaagcactaaccaa
agctcacctgagccttgtagtcccaatgactattgctttgacgtggataatgatatggct
aatgaatttaagctggaattagtggaaaaactctttgcaatagacacagaagcgaaaaat
ccattcactactcaggaaactgatttagacttggagatgttagctccttacatcccaatg
gatgacgacttccagttacgatcctttgatcagccgccttcactggacagtggttgcgcc
agctctcagagtgtggccaccagtaccatatttcagcaaactcacacactgtctcctgtc
gctgaggaaataacaccagtgaaaacagaatgcatggatgacattaagactctaattgtt
tctcagtctcctgtcctcataatcaatgaaaccaacagcgccccaccatcaccatatggt
ggaaatcgaagccgaactgcatctccaatcagggctggaaaaggaacattggaccagacg
gagaaatcttatccaggaacacccaatttgttaacagtcactttgagtaaaaggtctgct
gcaatggatgaagaactgaatccaaagatgctagctttgcataactctcagagaaagcga
aagatggaatatgatggctcactttttcaggcagtgggaattggatctttattccagcag
ttagaagattgtggcgcgaatgcatcactgtgttggaaacgtgtaaaaggatgcaaatct
aatggccagaatggagtgggacaaaagacaatcatcttattatcaactgatatagcaagt
aagctcctagggcagtcaatggatgagactggactaccccaacttaccagttacgattgc
gaagtaaatgctcccatacaaggcagcagaaacctgctacagggtgaagaattgctcaga
gctctggatcaagttaactga
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