Chelonoidis abingdonii (Abingdon island giant tortoise): 116830065
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Entry
116830065 CDS
T07367
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116830065 (CHD6)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116830065 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
116830065
NCBI-ProteinID:
XP_032645159
Ensembl:
ENSCABG00000016684
LinkDB
All DBs
Position
Unknown
AA seq
2791 aa
AA seq
DB search
MEQSMAVGASLLVGWTVKKAEDRKKRRGILVEVTFILKLIMKIQKKEKQGVCACAHERDM
LGSMSRLRYVAGCELSHSLMSGASFPCEYKPQAPFASSAYREDLCPHVNIADLASHYQRP
EEEPGEAVQKRMPSQNGMQDSGGGGTGVKKKRKKKAPGELEVGEKGALEREMKPKRKREP
KEPKEPRKPREPKKPREPKQKEAAKKPRKPREAKPPKEPKEKKSSTEPAPKAKSRKASKE
QGPTPMEKKKKGKRKNEIPVESLELDQGLLSPSLQSPEESAESADSQKRRSGRQVKRRKY
NEDLDFKVVDDDGETIAVLGAGRASALSASTLAWQAEEPPEDDANIIEKILSSRLVQKEV
HPGGLAYEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPD
EDLFNPDYVEVDRILEVAHTKDSDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEF
ESLQIPPEIKHVERPASEFWQKLEKSRDYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD
EMGLGKTIQSITFLSEIFLMDIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISR
QMIQQYEMVYRDAQGNPLPGIFKFHVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNR
NCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEE
QVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA
NQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKSHSPEALDFQLQAMIQAAGKLV
LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFC
KPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYR
LITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMD
EEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKW
AKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRLN
EKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYK
GDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLAS
CNPEIVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEVADKAFEGIPARELNVLLPD
IDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGV
SDGAQDAAERGNVEKEENSGDRVEGLPQQEDSGNLCGEAAEKQDDNVAAQDGSDSDRSCW
PVSSALTARLRRLVTVYQRCNRKELPPRAEMLVPSNHGYWLQEEMFRRAAEMDPVNKEMQ
KRWTRREQADFYRTVSSFGVIYDQEKKAFDWTQFRAISHLEKKTDESLEKYFYSFVAMCR
NVCRLPLWKEDGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLKYPQLHERLTLCRP
SLYLPVWWECGKHDRDLLLGTAKHGLNRTDYYIMNDPELSFLDAYRNYAQHKRAGVPGPE
NLCCLHQMNSKLYSSPSYCQMERTCESLENDAESQIKLENLEDALSRVEGSPQDTSCDPF
LSTVRDIISMNCDESSLPDSLMCMMYEEKACPSEHSSLARDSPSCTHVSNSAAKFAEGKL
DGDEDPSSCEAEAIRETSFLESLQIGCDHMDSPNEAREPWPSAPASQPSRSVLTEIDDAL
HRASPGPGSPELTSAEGVISLGLYGPSLHNLEIKIPPEQRFMSLLHEKGLEDKSVPSQSY
SEEEEEEEEENSEMAADAVEGLRGIPEARIDGDRKANVLAGEEPGSSLPAPKNTCPEVNG
EAELSGQVAFQCNSGAGDGEADHKSAAERLSDWPKSLPPAPSPTVAAQPKLPNAGPASMG
GECWEAGSAAQMGGGVAWHLEGHKPKQEDDECENKDEEEKEGTGQSRDCPEKYLEEESKS
SPCAQPGEMDKLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHTILKGKWPSS
SQQFETQTLMPTSMLASNTGTRNSFAEPEAPDPSFNNGMLVAQVQKESFLAPAFTKDEQK
HRQPYEFELERDAKPRSLEQLAASHSRPPVVLNGWRDSAGNLARASDGSPGNPSPFPLNS
NLPKLGTVHSLQGSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAALRRRRGRRKNVEGM
DLIFLKERSLQTGLQDVQEDQTQPAQSSPHPDGPVTATSTPHTVTATSIRTEKAVPNKSL
LDWLRQQSDYTLDVPGFSTSFSDKPKQRRQRCKDPNKLDINSLTGEERVPVVHKGTGRRL
GGAMAPALKELPRWLDANLEYAVAADWADIVKLSGFLPESKFNRILTEPVLRDSGPRRRG
RRPRSELIKAPDVVSDSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFA
AVPAGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNPPMTTTCTSTAPASLTSTTKSGTS
NTEKATEDKQSSQDVKNEPLSEDKPGPSSFSDQTESAITTSSPVAFNPFLIPGMSPGLLY
PSMFLSPGIGMTLPGIQQTRHSEATNLESQKRKRKKAKGEPTNPEPETVSLSEKEAANSQ
NCTEQTQSLSSEKEHDIQAEEKELKEINNTN
NT seq
8376 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcaatggcagtgggagcatccctcctggtgggatggacagtgaaaaaagca
gaggatcgcaagaaaagaaggggtattcttgtggaagtaacattcatcctcaagttgata
atgaaaattcagaagaaagaaaagcagggtgtgtgtgcatgtgcacatgaaagagacatg
ttaggcagcatgtcgaggctcagatatgttgcaggctgtgagctgtctcattccctgatg
tctggcgcctcattcccttgcgaatacaagccccaagccccctttgccagcagcgcctat
cgggaggacctgtgtccgcacgtgaacattgcagacttggccagtcactaccagcgccca
gaggaggagcctggcgaggctgtacagaagaggatgccatcccagaatggcatgcaggac
agtgggggtgggggcactggggtgaagaagaaacggaagaaaaaggccccgggggagttg
gaagtgggggagaaaggagccttggagagagagatgaaaccaaagaggaagagagagccc
aaagagccaaaggagcccaggaaacccagggagcccaagaaacccagggagcccaagcag
aaggaggcagccaagaaacccaggaaaccccgggaggccaaaccccccaaggagcctaaa
gaaaagaagagcagcactgagccggcccccaaggcaaagtccaggaaggcaagcaaggag
caaggaccaacccccatggagaaaaagaagaaagggaaaaggaaaaacgagatcccagtg
gagagtttggaattggatcaaggcctcctgagcccatctctgcagagccctgaggagtct
gctgagtcagccgacagccagaagcgccgttcgggccgccaggtgaagcggaggaagtac
aacgaggacctggatttcaaagtggtggatgacgatggcgagacgatagcagtgctggga
gctgggcgagcctccgcactctccgcgtccacgctggcatggcaggcagaggagccccct
gaggatgatgccaacatcattgagaagatcctctcctccagactggtgcagaaggaggtt
cacccaggcggcctggcctatgagatggaggaattctacgtcaagtacaggaacttctcc
tacctgcactgcaagtgggcgacgctggaagagctggagaaggaccccaggatctctcag
aagataaagcgctttcggaacaagcaggcccagatgaagcacatcttcacggagcctgat
gaggatttgttcaacccagactatgtggaggtggatcggatcctggaggtggctcacaca
aaggactctgacaccggggaggaggtgacccactacctggtcaagtggtgctcgctgccg
tacgaggagagcacctgggagctggaagaagatgttgaccccggaaaaatcaaagagttc
gagtccttgcagatcccaccagagatcaaacatgtggagcgccccgcttccgagttctgg
cagaaactggagaaatcacgggactataagaatagcaatcagctgcgggagtaccagctg
gaggggatgaactggctgctctttaactggtacaacaggaagaactgcatcctagcggat
gagatgggcttggggaagacgatccagtcgatcaccttcctttctgagatcttcctgatg
gacattcatggtcccttcctcatcatcgcaccactctccacgatcaccaactgggagcgg
gagttccgcacctggacggagatgaatgccatcgtgtaccacggcagccagatcagcagg
cagatgatccagcagtacgagatggtgtacagggatgcacagggtaaccctcttccaggg
atcttcaaattccatgtggtgatcaccaccttcgagatgatcctggccgactgccccgag
ctgaagaagatacagtggcgctgcgtagtcattgatgaggcccatcggctgaagaacagg
aactgcaagctgctggagggactgaagctcatggctctggaacacaaggtgctgctgacc
gggacgcccctgcagaactcagtggaggagctcttcagcctactgaacttcctggagccc
cagcagttcccctcggagacagcattcctggaggagttcggggatctgaagacagaggag
caggtgaagaagctgcagtcaatcctgaagcctatgatgctgcggcggctgaaggatgat
gtggagaagaacctggcgccgaagcaggagaccatcatcgaggtggagctaaccaacatc
cagaagaaatactaccgggccatcctagagaagaacttctccttcctgtccaagggcgcc
aaccagcacaacatgcccaacctcatcaacaccatgatggagctgcgcaagtgctgcaac
cacccctatctcatcaatggggcggaggagaaaatcctggaagatttccgtaagtcgcac
agcccagaggcgctggacttccagctgcaggccatgatccaggccgctggcaagctggtg
ctgattgacaagctgctgcccaagctgatcgccggtgggcacaaggtgctgatcttctcc
cagatggtgcgctgcctggacatcctggaggactatctcatccagaggcgatacacctat
gagcgcattgacgggcgggtgcgtgggaacctgcgccaggctgccatcgatcgcttctgc
aaaccagactcagaccgcttcgtcttcctcttgtgcaccagggcaggaggcctgggcatt
aacctcacagctgccgacacctgcatcatcttcgattcggactggaacccacagaacgac
ctccaggcgcaggcacgctgccatcggattgggcagagcaaggccgtgaaggtctatcgt
ctcatcaccaggaactcctacgagcgtgagatgttcgacaaggccagcctcaagctgggc
ctggacaaggccgtgctgcaggacatcaaccgcaagggcagcaccaatggggtgcagcag
ctctcaaagatggaggtcgaggacttgctacggaaaggagcatacggggctttaatggac
gaggaagatgaaggttccaagttctgcgaggaagatatcgatcagatcctgcagcgcaga
acccaaacgatcactatccagtcagaggggaagggctccacctttgctaaggccagcttt
gtcgcttcagggaacagaactgacatttccttggatgaccccaacttctggcagaagtgg
gctaagatagcagagctggacacggatgcgaagaatgaaaaggagagcttagtgatcgac
aggccccgtgtccgcaagcagaccaagcactacaactccttcgaggaggatgagctgatg
gagttctcggagctggacagtgactccgacgagcggcccacgcgctcgcggcgcctcaat
gagaagacgcggcgctacctgcgggctgagtgcttccgtgtggagaagaacctgctcata
ttcggctgggggcgctggaaggatatcctgacccacggacggttcaagtggcacttgaac
gagaaggacatggagatgatttgccgggccctcctggtctattgcgtcaaacactacaag
ggagatgagaagattaagagttttatctgggatctgatcactccgacgaaggacggccag
aaccaggccctgcaaaatcactcagggctgtcagctccagtgcccaggggcaggaagggg
aagaagacgaagaaccagatgctgctccctgagataaagaatgcggactggctggccagc
tgcaaccctgagatagtcctgcatgatgacagctacaaaaagcacctgaaacagcactgc
aacaaggtgctgctgcgggtgcgaatgctctactacctgaaagctgaagtgctgggagag
gtggctgacaaagccttcgaagggatcccggccagggagctgaacgtgctgctgccggac
atcgactacgtggagatcccagtggactggtggaatgcagaggccgataaatcgctgctt
attggagttttcaaacacggttacgagaggtacaacgccatgcgagcagacccagcactg
tgcttcctggagaaggtgggcatgccagacgagaagctgctatctgcggagcagggcgtc
agcgatggggcacaggatgctgcagaaagaggaaacgttgagaaagaagagaacagtgga
gacagagtggaggggctgccacagcaggaggactctgggaatttgtgtggagaagctgct
gagaagcaggatgacaatgtggcagcccaggatggctccgactcagacagatcctgctgg
cctgtctcgtccgccctcacagccagactgcggcggctcgtcaccgtctaccagcgctgc
aaccgcaaggagctgcctccccgagctgagatgctggtgcccagtaaccatggctactgg
ctgcaggaggagatgttcaggagagctgctgagatggacccggtgaacaaggaaatgcag
aaaagatggacgagaagggaacaggcagatttctaccgcactgtctcctccttcggggtc
atctatgaccaggagaagaaggcctttgactggacccagttccgagccatttcccacttg
gagaagaaaacagatgagagcctggagaaatacttctacagctttgtggccatgtgcagg
aacgtctgccgtctccccctctggaaagaggatggtccacctgatcccagtatctacgtt
gagccaatcactgaggaacgtgctgcaagaacgctgtatcggattgaacttctaaggaag
gtccgggagcaagtgctcaagtacccgcagctccatgagcggctcacgctgtgcaggccc
agcctgtaccttcctgtctggtgggagtgtggcaaacatgaccgggacctgctgcttggc
acagccaagcacggactgaaccgcactgactactacatcatgaatgatcctgaactgtca
tttttggatgcatatagaaactatgctcagcacaaaagagcaggtgtcccaggcccagag
aacctgtgctgcctccatcagatgaactccaaactctacagctccccttcatactgccag
atggaaaggacctgtgagtccctggagaacgacgctgagagccagatcaagctcgaaaac
ctggaggatgcgctctcccgggtggagggcagccctcaggacacaagctgcgacccgttc
ctgtcaacagtgcgggacatcatttccatgaactgtgatgagagctccttgccggactct
ctgatgtgcatgatgtatgaggagaaggcatgccccagtgagcacagctctctcgcccgt
gacagccccagctgcacacatgtcagcaacagtgctgctaaatttgctgagggcaaacta
gatggggatgaggacccatccagctgtgaggctgaggccatcagagagacctctttcctg
gagagcttgcagataggctgtgaccacatggatagtcccaatgaagccagggagccttgg
ccctcagccccagccagtcagccctccaggagtgtcctcaccgagatcgatgatgccttg
caccgggccagcccagggcctgggtcgcctgagctcaccagtgcggagggggtgatcagc
ctaggcctgtatgggcccagtctccataacttggagataaagatcccgccagagcagagg
ttcatgagcctgttacacgaaaaaggcttggaggataaatcagtgccaagtcagagctac
agcgaggaggaggaggaggaggaggaggagaattctgagatggcagcagatgctgtagaa
ggattgaggggcatcccagaggccaggattgatggggaccgcaaagctaatgtactagcg
ggggaggaacctggttctagccttcctgctcccaagaacacttgcccagaagtgaatggt
gaggcagagctttcaggacaggtggcattccagtgtaacagtggggcaggggatggggag
gccgaccacaagagcgctgcagagcgcttgtcagactggcccaagagcctccccccagca
cccagcccaactgtagctgctcagccgaagctcccgaatgctgggcctgctagcatggga
ggggagtgctgggaagctggctctgctgcgcagatggggggcggtgtggcctggcacctg
gaagggcacaagccgaagcaggaagacgacgaatgtgagaacaaagacgaggaagagaaa
gagggcactggccagagccgagattgtccagagaagtatttggaagaggagagcaagagc
tctccctgtgcccagcctggagagatggataagctgcaggatgcccgtgcgcccaccatc
gcccagctgctgcaggagaagacgctctactccttttcggagtggcccaaggaccgagtg
atcattaaccgcatagataatatctgtcacaccatcttaaagggcaagtggccctcttct
agccagcagtttgaaacacaaaccctgatgcccacatcaatgttagccagcaacacaggc
actaggaacagctttgccgagccagaagccccggaccccagcttcaacaatggaatgtta
gttgcacaggtacaaaaggaaagcttcctggctcctgcctttacgaaggatgaacaaaag
cacaggcagccctatgagtttgagctggagagagatgccaaacctagaagtcttgaacag
ttagctgcatcgcactcccgtccgcctgtagtgctgaacggctggcgggactcggcaggg
aacctggccagagcatctgatggatccccaggaaacccctctcctttccccttgaacagc
aacctgcccaagttagggacggtgcactccctgcaggggtccctgggcatggacttgtcc
ggcatcctccaggcaggattaatccatcctgtcacagggcagattgtcaatggaagcctc
cggagagatgatgctgccttgaggagacgacggggcaggagaaaaaatgtggaagggatg
gaccttatcttcttgaaggagaggagccttcaaactgggctgcaggatgttcaggaagat
cagacccagcctgcacagagcagcccgcacccagacgggccagtcaccgctacctcaact
ccgcatacggtcacagccacaagtatccggacagagaaggctgttccaaacaagagtctc
ctggactggttaagacagcagtcggactacacactcgatgtccctggcttcagcacaagt
ttttcggacaagcccaagcagaggaggcagcgctgcaaggatcccaacaaactggacata
aactcactcacaggagaggagcgggtccctgtggtccataagggtacaggacggaggtta
gggggagccatggcaccagcattgaaggaattgccaaggtggcttgatgcaaacttggag
tatgctgttgcagcagactgggctgacattgttaagctttcaggattcctcccagaaagc
aaattcaatcgtatcctaactgagcctgtgctccgagacagcgggccccgtcgaagaggg
aggaggccaagaagcgaacttattaaagctcctgatgttgtatcggattcttcttctgga
atgggaccgttattcatgaatggacttattgctggaatggatctagtgggacttcagaac
atgagaaacatgcaaggcatccctttaactgggctggttgggtttcctgctggatttgca
gcagtgcctgctggtgaggatgtcaaaagcaccctaagtatgttgcccatgatgctgcca
ggcatggctactgtaccgcagatgtttggtgttggaggtcttctcaacccaccaatgaca
actacttgtacttcaactgctccagcttcattaacaagcacaactaaaagtggtacatca
aatacagaaaaggctactgaggacaaacaaagtagccaggatgtgaaaaatgaacctctg
tctgaagacaaacctggtcctagttcattttctgatcagacagaatctgcaataactacc
agtagtcctgtagcttttaatccatttcttatcccaggaatgtcccctggactgctctat
ccatctatgtttctttcccctggtattggcatgacattgccaggcatacaacaaaccaga
cactctgaggcaacaaatctagaaagccagaagcggaagagaaagaaagctaaaggagaa
ccaacaaatccagaaccagaaactgtctcactgtctgaaaaagaagctgcaaacagtcaa
aactgtacagagcaaacccaatctttgtcatcagagaaagaacatgacatacaagcagaa
gagaaggagttaaaagaaattaacaataccaattag
DBGET
integrated database retrieval system
