Chelonoidis abingdonii (Abingdon island giant tortoise): 116830201
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Entry
116830201 CDS
T07367
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03013
Nucleocytoplasmic transport
cabi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116830201 (SRRM1)
03015 mRNA surveillance pathway
116830201 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116830201 (SRRM1)
03041 Spliceosome [BR:
cabi03041
]
116830201 (SRRM1)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116830201 (SRRM1)
Spliceosome [BR:
cabi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
116830201 (SRRM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
116830201
NCBI-ProteinID:
XP_032645420
LinkDB
All DBs
Position
25:8576095..8604912
Genome browser
AA seq
907 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEDKDSREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPRHRTKSRSITPAPEKKEETPEPEPSVQAKETLIQEATSTS
DILKVPKPEPVPDTKEISPERNSKKEREKEKEKTRQRSPSRSKSRSRSRSHSPSHSRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRSPSRRMPPPPRHRRSRSPLRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRIVSSPPRKTRKLSPSASPPRRRHRPSPPASPPPKPRRSPTPQQ
SNRGRKVRGSISPGRASAPKHKSTEKRESPSPVPKPRKVELSESEEDKGGKMAAADSVQQ
RRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRHRRHSHSPSPSPRKRQKDSSPR
MQIGKRWQSPMIKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSP
TPRRYSPPIQRRYSPSPPPKRRTATPPPPPPKRRASPSPQPKHRVSHSPPPKQRSSPVAK
RRSPSLSSKHRKSSPSSRSNRETRSPLQNKRHSPSPRPRASHTSASPPPLRRGTSSSPKR
RQSPSPSSRPIRRVSRTPEPKKTKASTPSPQSVRRVSSSRSASGSPEPAPKKHQAPPSPT
RSRSPSTNWSPPHVKKAQSPKQSPSPTRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHK
KEKAAAAAAAAAVTSAATSSAQEDPEAETELKKETESEAEDNLDDLEKHLREKALRSMRK
AQVSPPS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgggctttttccgcggaacgagtgcggagcaggacaatcgcttcagcaacaaa
cagaagaagctgttgaagcagctgaaatttgcagaatgtctagaaaagaaagtggacatg
agcaaagtaaacctggaagtaatcaagccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggatttttgaatgggaaaaatgctagagag
ttcatgggtgaactgtggccactgctgttaagtgcacaagaaaacattgctggtattccc
tctgctttcctggagctcaagaaagaagaaataaaacaaagacagattgagcaagaaaag
ttggcttctatgaagaaacaagatgaagacaaggacaagagggacaaagaggacaaagac
agcagagaaaaaagggacagatccagaagtccaagaagacgcaagtcaaggtctccttcc
cctagaaggagatcatctcctgtcagaagagagagaaagcgtagccactctcgatctcct
cgtcacagaaccaagagccgtagtattactcctgcaccagaaaagaaagaggagactcca
gagccagagccttcagtgcaagcaaaggaaacattgattcaagaggcaacatcaactagt
gatatcctgaaagttcccaaacctgaacctgtaccagatactaaagaaatttctccagaa
cgaaattcaaagaaagagagagagaaagaaaaagagaagactcgtcaaagatcaccatcc
cgttccaaatcaaggtcaaggtctcgctcacattccccttctcattctagaccaagaagg
cgtcatagatcacggtcaaggtcttactcccctagaaggcgaccaagcccaagacgacga
ccatctcctaggaggaggagtccttcaaggcgcatgcctcccccaccgagacacagaaga
agtagatcccctctgaggcggagaagacggtcatcagcatctttatctggaagtagctct
tcctcctcctcttcacgctctcgatcaccgccaaaaaaaccacctaaaagaattgtatcc
agtcctcctcgcaaaacaaggaaactgtctccttctgcaagccctcctaggcggaggcac
aggccttccccaccagcaagtccacctccaaagccacgcagatctccaactcctcagcag
tcaaatcgtggaagaaaagtccgtggctctatttctccaggcagagcctcagcacctaaa
cataagagtactgagaaaagagagtctccctcaccagtgccaaaacctagaaaagtagaa
ttgtctgaatcagaagaagacaaaggtggcaaaatggctgcagcagattctgtgcaacag
agacgtcagtacagaaggcaaaaccagcagtcttcatctgactctggttcatcctcttcc
tctgaagaggaacgaccaaaaagatcaaatgtgaagaatggtgaagtgggtaggcacaga
cgacactcgcatagtccatcaccttctccacggaaacgacaaaaggactcttcccctcgg
atgcagattggaaagaggtggcaatcaccaatgattaaaagtaggaggaggaggagtcca
tcaccaccacctgccagaagacggcgctctccttctcctgcacctcctccaaggcggcgc
agatcgccttcattgcctcgccgaaggtctccatcaccgcctccacgcaggcgctcgcct
actcccagacgatattctcctccaatacagagacgatactctccttcaccacctcctaag
cgaagaacagcaactcccccccctcctcctccaaaacgaagggcatcaccttctccgcaa
cccaagcacagagtctcacattctcccccaccaaaacaaagaagttctcctgtggcaaag
aggcgttccccatctctatcttccaagcataggaaaagttctccttccagcaggtctaat
cgtgaaacccgatccccactacaaaacaaacggcattcaccatctccgcggcctagagct
tcacatacctctgcaagtccaccgcctctgcgaaggggaacttcatcttcacccaagcgg
agacagtctccatctccaagcagtagacccatcaggagagtgtcaaggaccccggaaccc
aaaaagacaaaggcttccacaccaagtccgcagtctgtgagaagggtgtcttcatccagg
tctgcatcaggatcgcctgagccagcacctaagaaacaccaagcccctccatcccctact
cggtctcgatccccctccactaactggtcgccaccacatgtgaaaaaggctcaaagtcct
aagcagagtccatcccctacaaggaattctgaccaggaaggtggcgggaagaaaaagaag
aagaagaaggataagaagcataaaaaggacaaaaagcacaagaaacacaaaaaacataag
aaagagaaggctgcagctgctgcagcagctgctgctgttacttcagctgctacttcatcc
gcccaggaagacccagaagcagagacagagctcaaaaaggagacagagagcgaagcagaa
gataacctggatgatttagaaaaacatctgcgagagaaggcactgaggtcgatgaggaag
gcacaagtgtcaccaccatcttag
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