Chelonoidis abingdonii (Abingdon island giant tortoise): 116830436
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Entry
116830436 CDS
T07367
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03013
Nucleocytoplasmic transport
cabi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116830436 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
116830436 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116830436 (THOC2)
03041 Spliceosome [BR:
cabi03041
]
116830436 (THOC2)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116830436 (THOC2)
Spliceosome [BR:
cabi03041
]
Complex C
Other components
EJC/TREX
116830436 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116830436 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
116830436
NCBI-ProteinID:
XP_032645803
Ensembl:
ENSCABG00000005870
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MAAAGALPAEWIKNWEKSGKSEFLQLCRMLSENKSHENVTFRDIQQALYELANHVVKGNL
KHDQASNVLSDVIEFRDDMSSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDT
VLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQ
DLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEP
QTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPVDNAILEEHKR
EIVEAKQIVRKLTMVVLSSEKTEEKEKEKDKEEEKTEKPPDNQKLGLLEALLKVGDWQHA
QSIMDQMPPFYATSHKPIAIALCQLVHVTVEPLYRRVGVPKGAKGSPISNLQNKKAPKQA
ESFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTSKKLNSEDRMVKFQSD
GNKQEDKEKMEILFSCLLNITDQVLLPSLTLMDCNACMSEELWGMFKTFPYQYRYRLYGQ
WKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQ
IQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFC
GAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGG
EQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLV
GKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHI
SSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWS
LTMYDLAVPHNSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQL
EHVQRVLQRLKLEKDNWLLARSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQ
KTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRNIYEKECGN
YPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIV
LTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEF
HHKDPPARNAVAATVQNGPGGAGLPASLTINAAKLEESTAEETDKLKEKTQGAVKVINKA
ANATPKVTTSNGNSAPNSKIIKEKDDKEKSGKEKDKEKKEKTPAAIPEAKALGKDGKDKP
KEERANKDDKTRETKEKTPKSDKEKEKAKKEEKTPKDEKSKTVVTNTESKFTAEKEREKE
PSRERDVAKDMKSKENIKGGEKLSVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSS
TVKDSLSELKDSSAKHYINHTTPALSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRK
RDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKNKSKSSGKEKG
DSIKTEKMEKSSSGSKKESRHDKEKTEKKEKRDSAGGKEEKKHHKSSDKHR
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggggcgctccctgccgagtggataaagaactgggagaaatcgggcaag
agcgagtttttgcagttatgccgcatgctcagtgaaaataaaagccatgaaaatgtgact
ttcagagatatccagcaggctctgtatgagcttgcaaatcatgttgtcaagggaaaccta
aagcacgatcaagcttctaatgttctcagtgatgttatagaattccgggatgacatgtcc
tccatccttgctgatgtattctgcatattggatatcgaaacaagttgtttagaagaaaaa
agcaagagagatcattttacacaactggtgttagcctgtttgtaccttgtttcagacacc
gtcctaaaggagcgtctggatccggaaacactggaatcgttagggctcatcaagcagtct
cagcagtttaatcagaaatctgttaaaatcaagacaaaactgttttataaacaacagaaa
tttaacttattaagagaagagaatgaaggttatgcaaagctgattgctgaactggggcaa
gatttatctggcaatatcactagtgatttaatcctagaaaatatcaaatctttaatagga
tgttttaacttggatcccaacagagttttggatattatcttagaagtctatgaatgtagg
ccggaatatgatgatttctttgtacctttgatagaatcatacatgtatatgtgtgaacct
caaactctgtgtcatatccttgggttcaaattcaaattctatcaggaaccaaatggtgaa
acaccttcctctttatacagagttgctgcagtacttttgcaacataatcttatagatttg
gaagatctttatgtacatcttcttccagtagataatgctattctggaagaacacaaacga
gagattgtagaggcaaaacaaattgttaggaaacttacaatggtggttttgtcctctgaa
aagactgaagagaaagagaaggaaaaggacaaggaagaggaaaaaactgaaaagccacct
gacaaccagaaacttggtttgttggaagctttgttaaaagttggtgattggcagcatgca
caaagtattatggatcaaatgcctccattttatgccacttcacacaagcctattgccatt
gccctttgccagcttgtacatgtgaccgttgagcctttgtaccgcagagttggagtacct
aaaggggctaaagggtcaccaatttccaatttgcaaaataagaaagcacccaaacaagca
gaaagttttgaagatttgaggaaggaagtgttcaacatgctttgttatcttggtcctcat
ctctcccatgatcccattttatttgcaaaggtggttcgcttaggaaaagcatttatgaaa
gaggttggaacttcgaagaaactgaacagtgaggacagaatggttaagtttcagtccgat
ggaaataaacaagaggataaagagaaaatggagattttgtttagctgtttgttaaatatt
accgaccaagttttgctcccatctcttactttaatggactgcaatgcgtgcatgtccgag
gaactctggggaatgttcaaaacttttccataccagtatcgctatcgtctctatggacaa
tggaagaatgaaacatacaacagtcacccacttctagtgaaagttaaagctcaaactata
gacagagccaaatatatcatgaagcgtctaaccaaggaaaatgtgaagccttctggaaga
caaattgggaagctaagccatagcaatccaacaattttatttgattatattttgtcacaa
atacagaagtatgataatttaattacaccagttgttgattcattgaaatacctcacttca
ctgaactatgacgtcttggcatactgcatcattgaagctctggcaaatcccgagaaggag
agaatgaaacacgatgacactacaatttctagctggctgcagagtctagctagtttttgt
ggtgcagttttccgaaaatatccgattgaacttgctggtctactgcagtatgtagcaaac
caactaaaggctggaaaaagctttgacttgcttattttaaaagaagtggtacaaaaaatg
gctggaatagaaataacagaagagatgacaatggagcagctagaagccatgactggtgga
gaacagctaaaagctgagggtggatattttggccagatcagaaacactaaaaaatcttct
cagagattaaaagatgcattgcttgaccatgatctggcccttccattgtgcctgcttatg
gctcaacagcgaaatggtgtgatctttcaggagggaggggagaaacatttgaagctggtg
ggaaagctgtacgatcagtgccatgatactctggtacagtttggtggatttttagcatcc
aatctaagcacagaggattacattaagcgagtgccttctattgatgttctctgtaatgag
tttcacacaccacatgatgctgcatttttcctctccaggcctatgtatgcacatcatatt
tcatcaaaatatgatgaacttaaaaaagctgagaaaggaaacaaacagcagcacaaagtt
cacaagtacatcacgtcatgcgagctagtgatggctcctgttcatgatgctgtgatctcc
ttgcaccttcctaaagtttgggatgacatcagtcctcagttctatgctacattttggtct
ttgacaatgtatgaccttgctgttccacataatagctatgacagagaagtcaataaactt
aaagtccagatgaaagctatagatgacaatcaggaaatgcctccaaataaaaagaaaaaa
gaaaaagaacgttgtacggcccttcaggacaagcttcttgaagaggagaaaaagcagttg
gagcatgtgcagagggttctacagaggctgaaactggaaaaggataactggcttctggca
agatcaactaaaaatgagactatcacaaaatttctacagttgtgtatatttcctcgctgc
attttttctgcaatcgatgctgtttattgtgctcactttgtagaactggtgcatcaacag
aaaacgcccaatttttctacacttctctgttatgatagagttttctcagatataatctat
acagtagcaagttgcactgaaaatgaagctagtagatatggcaggtttctgtgctgtatg
ctagagactgttactaggtggcacagtgatagaaacatatatgaaaaggaatgtggcaac
tatccaggcttccttaccatattacgggcaactggatttgatggtgggaacaaagctgat
cagttagattatgagaactttcgacatgtggtacacaaatggcactataaattaactaag
gcttctgtacactgccttgaaacaggcgaatatacacatatcagaaatatcctgattgtg
ctgaccaaaatccttccatggtatccaaaagttctgaacctgggtcaggccttggaaaga
agagtacataaaatctgtcaggaagagaaagagaagagacctgatctatatgcgttagct
atgggctattctgggcaattgaaaagtagaaagccttacatggtaccggaaaatgaattc
caccacaaagacccccctgccaggaatgctgtagctgcaacagtgcaaaatggaccaggt
ggtgctgggctgcctgcatcactcacaataaatgcagctaaactggaagaaagcactgct
gaggagactgataaactaaaggagaaaactcagggtgctgtgaaagttattaataaagcc
gccaatgcaacaccaaaagtgacgacaagcaatggaaacagtgctcctaatagcaaaatt
attaaagaaaaagatgataaagaaaaaagtgggaaggaaaaagataaagaaaaaaaagaa
aagactccggctgccattccagaggccaaggcacttggaaaggatggaaaagataaacca
aaggaagaacgggcaaacaaagatgataaaacaagagagaccaaggaaaaaacaccaaaa
tctgacaaagagaaggaaaaagccaagaaagaagaaaaaacgccaaaagatgaaaaatcc
aagaccgttgttaccaacactgaatcaaagttcactgcagaaaaggagagagaaaaggag
ccatccagagaaagagatgtagcaaaggatatgaaatccaaggaaaatattaaaggagga
gaaaaattgtcagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagag
tctgaaagggaacaaaaacgtcgcaaagttgatacccattcttctccatcacattcctca
acagtaaaggacagcctcagcgaactcaaggactcttcagcaaagcactacattaaccac
actactcccgcactgtccaagagtaaggagagagaagtggacaagaaagatttggacaag
tccagggaaagatccagagagagagagaagaaagatgaaaaggataggaaagatcgaaaa
agggatcattcaaatagtgaccgagaggtgccacaggactcaaccaaaaggcgtaaagag
gaaaatggaacaactggttcttcaaaacatagtaaaagtgaaagtccatctgattcccct
cgttcaaatgagaaggaaaaggagaagaacaaatcaaaatcttcaggcaaagaaaaaggt
gattcaatcaaaactgaaaagatggagaaaagttcctctggtagcaaaaaggagtctaga
catgataaagaaaaaacagaaaaaaaggaaaaacgggacagtgctggagggaaagaagaa
aagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
