Chelonoidis abingdonii (Abingdon island giant tortoise): 116830533
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Entry
116830533 CDS
T07367
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi00310
Lysine degradation
cabi00514
Other types of O-glycan biosynthesis
cabi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116830533 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116830533 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cabi01003
]
116830533 (COLGALT1)
Enzymes [BR:
cabi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
116830533 (COLGALT1)
Glycosyltransferases [BR:
cabi01003
]
O-Glycan biosynthesis
O-linked Gal type
116830533 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
116830533
NCBI-ProteinID:
XP_032645963
Ensembl:
ENSCABG00000008263
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MARAVGLWLLLLLAPGGAYFPEERWSPESPLQAPRVLIALLARNAAHSLPAVLGALERLR
HPKERTALWVATDHNTDNTTAVLREWLINVQTLYHSVEWRPMEEPRSYPDEEGPKHWSNS
RYEHVMKLRQAALKSARDMWADYILFVDADNLLTNPDTLGLLMAENKTVVAPMLDSRAAY
SNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRKEASRDLAFYPPHPD
YTWSFDDIIVFAFACKQAEVQMFVCNKEVYGFLPVPLRAHSTMRDEMESFMHVQLEIMVK
NPPVESSEYLSVLPKVPDKMGFDEVFMINLKHRADRRERMLRTLYEQQIDCKIIEAVDGK
AMNSSEVEAMGIQMLPGYKDPYHGRPLTKGELGCFLSHYKIWKEIVERGLEKSVVFEDDL
RFEIFFKRRLMNLIYDLEEEGLDWDLIYIGRKRMQVDHPEKSVPHVRNLVEADYSYWTLA
YVISLQGAQKLLAAEPLSKMLPVDEFLPVMFDKHPVSEYMEHFENRNLLAFSVEPLLVYP
THYTGDDGYISDTETSVVWNNERVKTDWDRAKSQKMKEQQELSKEAKNSDVLQSPLDSTA
RDEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggccgtcgggctctggcttctgctgctgctggccccgggcggcgcctacttc
cccgaggagcggtggagcccggagtcgccgctgcaggcgcctcgggtgctgatcgcgctg
ctcgctcggaacgcggcgcactcgctgccggcggtgctgggggccctggagcggctgcgg
cacccgaaggagcgaacggcgctgtgggtggcaacagaccacaacactgacaacacaacg
gctgtgctacgagaatggctgataaatgtgcagactttgtatcactctgtggagtggagg
ccgatggaggagcccaggtcctatccggatgaggaaggcccgaagcactggtcaaattct
cgctatgagcacgtgatgaaacttagacaagcagccttgaaatctgctagggacatgtgg
gctgactacatcttgtttgtggatgcagataatctcctgacaaacccagacaccctgggc
ctgctgatggcagagaacaagaccgtagtggcgcccatgttggactctcgtgctgcctat
tctaacttctggtgtggaatgacttcgcagggttattacaaacgcactcctgcctacatt
cccattcgaaaacgagatcgccgtggctgctttgctgtccccatggtgcactccactttc
ctgattgacctgcggaaagaggcctcccgggaccttgccttctacccaccacacccagat
tacacctggtcttttgatgacatcattgtctttgcatttgcctgcaagcaggcagaggtc
cagatgtttgtatgcaacaaagaggtttatggcttcctgccagtgccactgagagcccac
agcaccatgcgggatgagatggaaagcttcatgcacgtgcagctggaaataatggtgaag
aatcctccagtggaatcttcagaatacctgtctgtcctgcccaaggtccctgacaagatg
ggctttgatgaggttttcatgattaacttaaagcacagggcagatcgacgagagcgaatg
ctgcggacgctgtacgagcagcagattgactgcaaaatcattgaggctgtggatggaaaa
gccatgaacagtagtgaggtggaagctatggggattcagatgctgccaggatataaggat
ccataccacggccgtccactcaccaaaggggagctgggttgcttcctcagtcactataag
atctggaaggagattgtggagagagggctggagaaatcagtcgtgttcgaggatgacctg
cggtttgaaatattctttaaacgacggctgatgaatctgatatatgacctggaagaagag
ggtctggattgggacttgatttacattgggaggaaacgaatgcaggtggatcacccagag
aagtctgtgcctcacgtgcggaacctggtggaggcagattattcctactggactctagcc
tatgtgatttcactgcagggtgcccagaagctgctggcagctgagccgctctccaagatg
ttacctgtggatgaatttcttcctgtcatgtttgacaaacaccctgtctctgaatacatg
gaacattttgaaaaccggaatttgctggccttttcagtggaaccactgctggtttaccca
acacattacaccggtgatgatggttacatcagcgacactgagacctctgtggtttggaat
aatgagagagtaaaaactgactgggaccgtgccaaatcccagaaaatgaaagaacagcag
gagctcagcaaggaggccaagaactcagatgtgctccaatcacctcttgacagtacagcc
cgggatgagctatga
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integrated database retrieval system
