Chelonoidis abingdonii (Abingdon island giant tortoise): 116830704
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Entry
116830704 CDS
T07367
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cabi03009
]
116830704 (DDX56)
Enzymes [BR:
cabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116830704 (DDX56)
Ribosome biogenesis [BR:
cabi03009
]
Eukaryotic type
Pre-60S particles
Helicases
116830704 (DDX56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
116830704
NCBI-ProteinID:
XP_032646233
Ensembl:
ENSCABG00000012315
UniProt:
A0A8C0H3D5
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MEPQLSFAHMGLDGRLLQAIAELGWAKPTLIQEKAIPLALEGKDLLARARTGSGKTAAYA
IPLIQHLLQVKMSPLVMEQAVRGLVLVPTKELGQQVLQMIRQLTAYCSRDVRVADVSGQV
DMSAQRPILMEKPDVVVGTPSRVLAHLQGHSLSLRHSLEVLVLDEADLLFSFGFEEDLKN
LLCHFPKIYQSFLMSATFSEEVQALKELVLHNPVTLKLRESQLPEAAQLCQYQIRCAGEE
DKFLLLYALLKLGLVPGKAILFVNTVERGYRLKLFLEQFSIPACVLNSELPVQSRCHIIS
QFNRGFYDYIVATDEQGLAEPAVRAKRRKGAKTEKGKDPEYGVARGIDFQNVATIINFDP
PPSVESYIHRAGRTARADNPGTALTFVTHPECPLLAEIEEALAGENTEPVLRPYQFRMEE
VEGLRYRCRDAMRSVTKQAIKEARLREIKEELLNSEKLKTYFEDNPHDLRLLRHDRPLHP
AIVKPHLRNVPEYLVPPTLRAIAQPLLNKRKRRKHLAPSSSRPRGGFQARGGRNPLRSFQ
YMGRRPRRPASKGRTS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcagctcagcttcgcgcacatggggctggacgggcggctgctgcaggccatc
gctgagctgggctgggccaagcccacattgatccaggagaaggccattccactggccttg
gagggcaaggacctgctggcccgggctaggactggttctgggaagacggccgcctatgcc
atccccctcatccagcacttgctccaagtgaagatgtcccccttggtgatggagcaggcc
gtgcgtgggttggtcctggtgcctaccaaggagctgggccagcaggtgctacagatgatc
cggcagctgacggcgtactgctcccgtgatgtccgtgtcgccgatgtctctgggcaggtg
gacatgtctgcacagaggcccatcctgatggagaagccggatgtggtggtggggacgccg
tcacgggtcctggctcacctgcagggccacagcctgagcctgcgccactccctggaggtg
ctggtcctggacgaggccgacctactcttctcctttggcttcgaggaggatctgaagaac
ctgctgtgccacttccccaagatctaccagagcttcctaatgtcggccaccttcagcgag
gaggtgcaggcgctgaaggagctggtgctgcacaacccggtgaccttgaagctgcgggag
tcccagttgccggaggcggcccagctgtgccagtaccagatccgctgcgcgggcgaggag
gacaagttcctgctgctttatgcgctgctcaagctggggctggtgccgggcaaggccatc
ctctttgtcaataccgtggagcgcggctaccgcctcaagctcttcctggagcagttcagc
attccagcctgcgtgctcaactccgagctgcccgtgcagtcccggtgccacatcatcagc
cagttcaaccgaggcttctacgactacatcgtcgccaccgacgagcaggggctggcggag
cccgcggtgcgggccaagaggaggaagggtgccaagacagagaagggcaaagacccagag
tacggcgtggcgcggggcatcgacttccagaacgtcgccaccatcatcaacttcgacccg
cccccctcggtcgaatcctacatccaccgggccggcaggacggcccgtgctgacaacccc
ggcacagccctgacttttgtgacacacccagagtgccccctgctggccgagattgaggag
gctctcgcaggagagaacaccgagcctgtgctgcgcccctaccagttccggatggaggaa
gtcgaggggctccgctacagatgccgggacgccatgcgctccgtcaccaagcaggccatc
aaggaggcgcggctgagagagatcaaggaggagctactcaactcggagaagctgaagacg
tacttcgaggacaatccccacgacctgcggctgctgcgccatgaccggcccctgcacccg
gccatcgtcaaaccgcacctgcgcaatgtgcctgagtacctggtgccccccaccctgcgc
gccattgcccagcccctgctcaacaaacgcaagcgacggaaacacttggcccccagcagc
agccgccccagggggggcttccaggcccgggggggccgcaaccctctgcggagcttccag
tacatggggaggagacctcgtcgcccagctagcaaggggaggacgtcctga
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