Chelonoidis abingdonii (Abingdon island giant tortoise): 116830756
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Entry
116830756 CDS
T07367
Symbol
POC1B
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
KO
K16482
centriolar protein POC1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116830756 (POC1B)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cabi03037
]
116830756 (POC1B)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116830756 (POC1B)
Cilium and associated proteins [BR:
cabi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116830756 (POC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EIPR1
DSE1_N
CFAP251_N
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SCAP
ASA1
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
PAC11
Ge1_WD40
Beta-prop_NOL10_N
Beta-prop_DCAF4
RMC1_N
eIF2A
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_VPS8
BCAS3_WD40
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_WDR75_2nd
Tricorn_2nd
TRM82_WD
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
116830756
NCBI-ProteinID:
XP_032646287
LinkDB
All DBs
Position
1:complement(84405621..84506977)
Genome browser
AA seq
482 aa
AA seq
DB search
MASVLEDPILIRPFKGHKAAVTGVDFSPTTTALASSSLDRFLMIWNLKPQSRAFRFVGHV
EAVTSVQFSPDGHLMASASQDRTVRLWIPCIHGESSVLKAHTAPVRSVNFSHDSQFLVTA
SNDKSIKVWSVHHQRLLFSLSQHTHWVRCAKFSPDGRLIASCSEDKTVKIWDAANKICID
SFTDYEGFANYVDFNPSGTCVVSAGSNHTVKLWDIRMNKLLQHYRVHRGGVNCVSFHPSG
NYLITASTDGTLKIMDLLEGRLIYTLHGHKGPVLSVAFSKGGEKFASGGVDAQVLLWKTN
FDTFNYKEVLKQHIRRIHTDDPPHLLDIYPRSPHPHDGQSQSIEIDPSFDVTDTQTLDPP
VVDISSSVYFSSPSRTTGSSNGISPFKDDMSSEDLRYRPALFSPTSSRRRLEDEVQPAVC
TLDKRIGISPALGNALEHIVEQLDVLTLTISILEQRLTLTEDKLKECLENQHKMLLQARQ
GE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtgctggaggatcctatcttaattcgtccctttaaaggccacaaagctgca
gtcaccggcgttgacttcagcccgaccaccacggcacttgcctcatcatctttggatagg
tttcttatgatatggaatttgaagccacagtccagagctttcagatttgtgggtcatgta
gaagctgtgaccagtgtacagttttcaccagatgggcatctcatggcatctgcttctcag
gatcggactgttagactgtggattccctgtattcatggagaatcttcagtcctgaaagcc
catactgcacctgtccgtagtgtgaacttctcacatgatagccagttcctagttacagcg
tccaatgacaaatcaataaaagtatggagtgtccaccaccagcgccttttgttttcctta
tcccagcacacacactgggttcgctgtgccaaattttcacctgatggaagattaatagca
tcttgcagtgaggataaaactgttaaaatctgggatgcagcaaataaaatatgcattgat
agctttacagactatgaagggtttgcaaactatgttgatttcaatccaagtggtacatgt
gtagtttcagcaggttctaatcatacagtgaagctctgggatattcgaatgaacaagttg
ctgcagcattaccgagttcacagaggaggagttaattgtgtatcattccatccttctggt
aactatctcatcactgcttctactgatggtacccttaaaattatggatctgttagaagga
agacttatatatacgcttcatggacacaagggacctgtgctttctgtggccttttccaaa
ggtggggaaaaatttgcatcaggtggagtggatgcacaggtattactgtggaagaccaat
tttgatacatttaactataaggaagttcttaaacagcatattagaagaatacatactgat
gacccacctcaccttcttgatatttatccaagatcacctcatccccatgatgggcaatct
cagtcaattgaaatagatcctagctttgatgtgacagatacacaaacgcttgacccacct
gttgtagatattagttcctccgtgtatttcagttctccgtcaaggacaactggctcttca
aatggaatttccccattcaaagatgatatgagtagtgaagatctgcggtatcgtcctgct
ttgttctcacccacaagctcaagaaggaggctggaggatgaggttcaaccagctgtgtgt
accttggacaagcgcataggcatctcgccagctctgggtaatgctttagagcacattgtg
gagcaactggatgttttgactttaactatttcaatcctggagcagcgactgactttgact
gaagataaactgaaagaatgcttagaaaatcaacacaaaatgttacttcaagccaggcaa
ggagaataa
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