Chelonoidis abingdonii (Abingdon island giant tortoise): 116830982
Help
Entry
116830982 CDS
T07367
Symbol
ATM
Name
(RefSeq) serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03440
Homologous recombination
cabi04068
FoxO signaling pathway
cabi04110
Cell cycle
cabi04115
p53 signaling pathway
cabi04210
Apoptosis
cabi04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116830982 (ATM)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
116830982 (ATM)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116830982 (ATM)
04210 Apoptosis
116830982 (ATM)
04115 p53 signaling pathway
116830982 (ATM)
04218 Cellular senescence
116830982 (ATM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cabi01001
]
116830982 (ATM)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cabi03032
]
116830982 (ATM)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116830982 (ATM)
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116830982 (ATM)
Enzymes [BR:
cabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116830982 (ATM)
Protein kinases [BR:
cabi01001
]
Serine/threonine kinases: Other
PIKK family [OT]
116830982 (ATM)
DNA replication proteins [BR:
cabi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116830982 (ATM)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
116830982 (ATM)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
Check point factors
Other check point factors
116830982 (ATM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT_Pincer_Tel1
M-HEAT_ATR
TPR_ATM
HEAT_ATR
Motif
Other DBs
NCBI-GeneID:
116830982
NCBI-ProteinID:
XP_032646574
LinkDB
All DBs
Position
1:complement(336749267..336868687)
Genome browser
AA seq
3069 aa
AA seq
DB search
MSLVLHELLVCCRQLENDKITERRKEVEKFKRLIRDSETINQLDRNSDSKQGKQLNWDAV
FRFLQKYILKETDSIRLAKPNVTASTQASRQKKMQEISSLVKYFIRCANKRAPRLKCQEL
LNYIMDIVKDASSCAIYGADCSSILLKDVLSVRKYWCEISKQQWSELLTLYCKLYLKPSR
DINRVLVARIIHTLIRGCYFQTDELNSNLFCFFEKALQCARQENASAGLDHILPAINIVF
SVYAVNCRMQICKLGEEILPMVLYIWTQYRPNESVKELIIQLLQLQVRVHHPKGAKTQEK
GAYDSAKWRRILHSLHDLLVNELSLIGSRGKYSSGSRNIAVKENLIELMADICHQVFTED
TKVLEITQSYTVTQREPGDEAAPSKRRKIELGWEIIRDNLQISQNDFDVIPWLQITARLI
SKYPMSLPNRELSPLLTILHQLLHQQRKGERTPYVLRCLTEIAVCQSQKLDLESAQKLEL
QRIWAKVWSLTIRSISFQQVETESFGLLGAIIQGNLIVIDKELWKIFSGSAYKPSSPAAR
CLALAMTAYVVPETLKVGMVQNNCEGNTGCMLKEAIMKWLLFCHLEEKMEERFELPPVLC
SDFPHLVLQKTLVSLTMKNCRAAMNFFQNATECVQHKQDKGEVSFLEIEDLYLQTTFDEM
TIFTSLAVNIADKNLSGSGLAVNQNHRETLEHCLLVVSEQLLNSYSSEIYSKSTTAEHLV
RCVNLLIGVLGCYCYAGTLTEEDACKSELFHKAKSLMHYVGESISQSKNKLNEDSRIILL
RTLITQCTNCLCNCTKSSPSKILSGLFLSLLTSKMMNDLVDICKHLMVFTGKLSDAGEVD
LMEDNIEKSAMEVDNQVAMDQFDDHCITDSGDANESGEMQSVTGAVSPLAEEHLTKQDLL
LLEILRLLCLCVTTTQIHTVCFRAPDIRRKLLMLIDKSIFDAAKSLHLQVYLVLLKELPT
EENLLPEDDFLLLLKPLSDVCSLYRRDQEVCKAILNNLLPAAVGLGQANPNVEETGEVQG
QFLTVVGAFWHLTKEGRCTAPVRVALLNCMKALLEADPHSNWAVLNVRDKHLPVSDAFPH
FLADSHHQVCMLAAKSIASLFQDMKQRDSSGLPKALPLKFQQKAFENVYLRVQEGMRELA
CGGMRPEDLLDEQCNRRAVLLMLITMVLCCSPVCEKQALFAICQSMKENGLDPHVIKKVL
ERVSNIFGYKSIEDFMTSQLDYLVLEWLRMKDNGYSLSAFPYIVLNYSSLEEFYRSCYKV
LVPHLVIRSQFEDVKSIANMIEKDWRQLLADCFPKILVNILPYFACESHRDSEIAQQRDT
AYKVYDMLKDESCLGKQIDNLSHSNLPEVVVELLMTLHEPVNTTAGEGADLSKFTGELDP
APNPPHFPSYVIMATLDYISSCHKTKLKSIVAVLSKNPDSFQKILLAICKQAADTNNIYK
KHRILIIYYLFVNLLLKEIKDGLGGAWAFVLRDIIYTLIHYINSRPSLGRDMSMRSFSLC
CDLLNLVCHAAVTYCKDALENHLHVVVGTLIPLVRDQPEIQKQVLGLLKYLVIDNKDNEN
LYQTIKHLDPFPEHPAFKDLRATQQKIKYGKGAFSLLEEINHFLSVSFCDSLPFARLEGL
NDLRKQLEQHKDQMKDLMKNFQEKPQDYVIVKLVVSLLQLAKTAVNHTGEKAVLEAVGSC
LGELGPIDFSTITLQHSKNAVYSKAVDLFEDRELQWVFIMLTLINNALIDDCIGVRSAAA
ACLKNILATKAGNEFWEVYKNKADPMLIYLHPFRMSRKKFLEVPSNGRESPSENLDDASV
WIPQSVSHDTWIKNLTCSLLDSGGVRNEILQLLKPMCEVKTDFCQTLLPYLIRDILLHDS
NESWRNLLSMYIQRFFTTCCRYSSSSRSTTPANSNSEPETFVSGRLDKVSRRTMLDVVDY
LRSQKRSLSGTIFDNSFWLDLNYLEVAMVAQSCAAHFTALLYTEIYADKINLDKQQERSA
FKASRNLTFEEESQSPTINSLNEKSKEETGISLQDLLMEIYRSIGEPDSLYGCGGGRMLQ
PLARIRTYEHEAIWGKALVTYDLEASLPPATRQAGIIEALQNFGLCHTLSTYLKGLEYEN
TESCAELKEIRYQAAWRNMQWDHISSAKDEMGRSGYHESLYDALQSLRDREFSAFHEGLK
DARVSEVEELCKGSLESVFSLYPTLCRLQTIGELENIGQLFSRSVTNKQLNDVYLKWQRQ
SQLLKDSDFGFQEPIMALRTVILEILLEKESENSKRECIKDILTKHLVELSKLARTAKNT
QLPERAMFQIKQYNPPMCVVSEWQLEEAQVFWAKKEESLALNILKEMIKKLDTNWFQVEN
DPSLRLIYTECLRLCGNWLAETCLENPTVIMQKYLEKAVEIAGSHSGDSSDELKNGKMKA
FLSLARFSDIQYQRIKNYMKSSEFENKQALLKKAKEEIGLLKEHRVQTNRYTVKVQRELE
LDECAIHALSEDCERFLCKAVENYISCLLSGEEHDMWIFRLCSLWLENSGVSDVNEKMKT
IAEKIPSYKFLPLMYQLAARMGTKIMGCPGFHEVLNKLISRISLDHPHHTLFIVLALANA
NKDELLAKPEATRRNRLTKNVPKEISQLDMDRMEAASNIINNIKNGRPQMVRGVEALCDA
YITLANLDASPWKSQRKGISIPAGQPITKLKNLEDVVVPTMEIKVDPTGKYENLVTIRSF
KPEFRLAGGLNLPKIIDCIGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQQNTETR
KRKLTIRRYKVIPLSQRSGVLEWCSGTAPIGEFLVNPEEGAHRRYRPKDYSSTYCQKTMM
DAQKQNSEEKYNIFMDICQNFQPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYIL
GLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGV
FRRCCEKTMAVMRNSQEALLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDEADINSTLNT
SDQKCNRKARDDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSR
LFPGWKPWV
NT seq
9210 nt
NT seq
+upstream
nt +downstream
nt
atgagtctagtgctacatgagctgcttgtttgctgccgtcaacttgaaaatgacaaaatt
acagagcgaaggaaagaagttgaaaaattcaaacgtctcatccgtgattctgaaacaatt
aaccaactggatcgtaattctgactctaaacaaggaaaacaactgaactgggatgctgta
tttaggtttctgcagaaatacatcctgaaagaaactgacagtatcagattggcaaaacca
aatgtaactgcctcaacacaagcttctaggcagaaaaagatgcaagagatcagcagtttg
gtcaaatacttcattagatgtgctaataaaagagcacccagattaaaatgtcaggagctt
ctgaattatatcatggacatagtgaaagatgcatcaagttgtgctatttatggagctgac
tgtagtagcatactactaaaggatgttctttcagtgaggaaatattggtgtgagatatct
aagcaacagtggtcagaactgctgaccctgtactgcaaattgtatctcaaaccttccaga
gatattaacagagttttggtggctagaataattcacacactgatcagaggatgctacttc
caaactgatgaactaaattccaatcttttttgcttctttgaaaaagcactacagtgtgca
agacaggagaacgcctctgcaggtctggatcatattcttccagcaattaatatcgtcttc
agtgtgtatgctgtgaactgtcgtatgcagatttgtaagctaggagaagaaattcttcct
atggttctttatatatggactcagtatagaccgaacgagtctgtaaaggagttaataatt
cagttacttcaactgcaggttcgtgttcatcatccaaagggagccaaaacacaggagaaa
ggtgcatatgactcagcaaaatggcgaagaatcttacacagcttgcatgatctgctggtg
aatgagttaagtctcattggcagtagaggaaagtattcttcaggatcacgcaatattgct
gtaaaggaaaacttgattgaattaatggctgatatttgtcatcaagtctttactgaagac
accaaagtcctggagataacccagtcgtacactgttacacaaagagagcctggagatgaa
gctgcgccaagcaagcgtaggaagatcgaattgggctgggaaataattcgagacaacctg
cagatatcacagaatgattttgatgtcataccttggttgcagattacagcccgattgata
tcaaagtatcctatgagtcttcctaaccgtgaattatctcccttactcactatactacac
cagctactacatcagcagagaaaaggggaaaggaccccatatgtgctaaggtgccttaca
gagattgctgtttgtcagagccaaaaattagatttggaaagcgctcaaaagttggagctg
cagagaatctgggcaaaagtttggtctcttacaattcgcagcataagttttcagcaagtt
gaaacagaaagctttgggttacttggagccataattcaaggaaaccttattgtaatagac
aaagaactctggaagatattttcagggtctgcatacaagccttcgagtcctgctgcacgt
tgtttggcattagcaatgactgcttatgtagtaccagaaactttgaaagtaggaatggtg
cagaataattgtgaaggaaatactgggtgcatgttaaaagaagcaataatgaaatggcta
ctgttctgtcatttggaagagaagatggaagaacgttttgagttaccccctgtgctatgc
agtgattttcctcatctagtgctgcagaaaactcttgtgagcctgactatgaagaactgc
agagctgcaatgaactttttccaaaatgctactgagtgtgtgcaacacaaacaagacaaa
ggagaggtcagttttttggaaattgaagacctatatctgcagacaacttttgatgaaatg
actattttcaccagccttgcagtgaacattgcagataaaaatctgtctggttcaggactt
gctgtcaaccaaaaccatagggaaacgctggaacactgtctgttagtggtgtcagaacag
cttttaaacagctactcttctgagatttattccaagtctactactgcagaacacctagtc
cgatgtgtcaatctcttgattggtgttcttggctgctattgctatgctggcacattaact
gaagaggatgcatgtaaatcagaattgttccataaagctaagtctctcatgcattacgtt
ggagaaagtatttctcagtctaaaaataaactaaatgaagattctaggatcatcttgctg
aggactttgataacacaatgtaccaactgcttatgtaattgtaccaagagcagtccaagt
aagatcttatcaggcttattcctgagtttgttaacatcaaagatgatgaatgatcttgta
gatatttgcaaacatctgatggtctttactggcaaactgagtgatgctggagaagtagac
ctaatggaagataatattgagaaaagtgcaatggaagtagataaccaggtagccatggac
cagtttgatgatcactgtatcactgactccggtgatgctaatgagtctggggagatgcaa
agcgtaactggtgctgttagcccattagctgaagaacatttgacaaagcaggatttactc
ctccttgaaattctgaggctcttgtgtctatgtgtaactacaacacaaatccatacagtc
tgcttcagagcacctgacatacgacggaagctgttaatgctaattgataaaagtatattt
gatgctgctaaatcactgcatctacaagtgtatttagtccttttgaaggaactcccaact
gaagaaaatttgttgccagaagatgattttctcctgcttctcaagcctctttctgacgtg
tgttccttgtatcgtcgagatcaagaagtttgtaaagcaattctaaataacctacttcct
gcagcagtggggttgggccaagccaacccaaatgttgaagaaacaggggaagtccaagga
caatttttaactgttgtgggagcattttggcacttgacaaaggaagggagatgtacggct
ccagtaagagtggccctgctgaactgcatgaaagccctacttgaggctgatcctcattca
aattgggctgtgcttaacgtaagagataaacatctgcctgtgagtgatgctttcccacat
ttcctcgcagatagccaccatcaagtgtgcatgctcgctgcaaagtcaatagccagtttg
ttccaagatatgaaacagagagattcttctggattaccaaaagctcttcctttgaagttc
cagcaaaaggcctttgagaatgtatacctcagagttcaagaaggaatgagagaactggca
tgtggtggaatgcgccctgaagacctattggatgagcagtgcaatagaagagcagttctg
ctgatgctgataaccatggttttatgttgcagtcctgtgtgtgaaaagcaggctttgttt
gctatttgccagtctatgaaagaaaatggattggaccctcacgttataaaaaaggttttg
gagagagtatcgaacatttttggctataaaagtatagaagacttcatgacttcccaatta
gactatctggtgctggagtggctgagaatgaaagataatggatatagcctatctgctttt
ccttacattgttttgaactactctagccttgaggagttctacaggtcttgttataaagtt
ttggttccacacctggtgatcagaagtcagtttgaagatgtgaaatctattgctaacatg
attgaaaaagactggcggcagcttctagcagactgctttccaaagattcttgtaaatatc
cttccctattttgcctgtgaaagccatagagatagtgaaatagcacaacagagagataca
gcttataaagtctacgacatgcttaaggatgaaagctgcttaggaaaacagattgacaat
ttatctcacagtaacttgccagaggttgtggtggagctgctgatgaccctgcatgagcca
gtcaacaccacggcaggagaaggagctgatctaagtaaatttacaggggaactagaccct
gctcctaatcctcctcattttccatcttatgtgatcatggcaaccttggattatattagc
agttgtcacaaaaccaagttaaaaagtattgtagctgtactttctaaaaatcctgattca
ttccagaaaatcttactagccatttgcaaacaagcagctgatacaaacaatatttacaaa
aaacacaggattcttataatttattacttatttgttaacttgttacttaaagagataaag
gatggtttaggaggagcatgggcttttgttcttcgagatataatatataccctgattcac
tacatcaacagcagacccagtcttggcagagacatgtccatgcgcagcttttctctctgc
tgtgaccttctaaatcttgtttgccacgcagcagtcacatattgtaaggatgccctcgag
aatcatcttcatgttgttgttggaacactaatacctcttgtcagggaccagcctgaaatt
cagaagcaggtcctaggcttgttgaagtacctagtgatagataacaaggataatgaaaac
ttgtaccaaacaatcaaacatttagatccttttcctgagcatcctgcttttaaagatttg
cgtgctactcagcagaaaatcaaatatggtaaaggagcattttcacttttggaggaaatt
aaccacttcttatcagtaagtttctgtgactcactgccatttgcaagacttgaaggatta
aatgatttacgcaaacaactggaacaacataaagatcagatgaaggatctcatgaaaaac
ttccaggaaaaaccccaagactatgtcatagtaaagttggtggtgagcttgctacaactg
gccaagacagcagttaatcatacaggtgaaaaggcagttttagaggctgttggaagttgt
ttgggagaactgggtcctatagatttctccaccataactctgcaacatagtaaaaatgca
gtctattctaaagcagttgacttatttgaagatagagaacttcagtgggtcttcataatg
ctaactctaataaataatgctttaatagatgattgtattggtgttcgatctgctgctgct
gcctgtttgaaaaacattttagccaccaaggctggtaatgaattttgggaggtttacaaa
aacaaagctgatcccatgttaatatatctccatcctttcagaatgtctcgaaagaagttt
ttagaagtaccaagtaatggaagagagagtccttcagaaaatctagatgatgcaagtgtg
tggattcctcagagtgtaagtcatgatacttggatcaagaacctgacttgttcattactg
gacagtggaggtgtgagaaatgaaattcttcagttactgaaaccaatgtgtgaggtgaaa
acggacttttgtcagactttgctcccgtacctgattcgtgatatcctgcttcatgattca
aatgaatcttggcgaaatcttctgtccatgtatatacagaggtttttcacaacttgttgc
agatactcctcatccagcagatcaactacacctgcaaattccaattcagaaccagaaacc
tttgttagtggacgtttagataaagtatctcggcgaacaatgcttgatgttgttgattac
ttgagaagtcaaaagagatctctttcaggtaccatttttgataacagtttctggctggat
ttgaattaccttgaggttgctatggtagcacaatcttgtgctgctcacttcacagctttg
ctctacacagaaatctacgcagacaagataaacttagataaacaacaagaaagatctgct
ttcaaagcatctagaaatctaacatttgaagaagaaagccaaagtccaactattaacagt
ttgaatgagaaaagtaaagaagaaactggaataagcttacaggaccttctcatggaaata
tacagaagtataggagagcctgatagtctctatggctgtggtggaggaagaatgttacag
ccattagctaggataagaacatatgagcacgaggccatatgggggaaggcccttgtaaca
tatgaccttgaagcaagtctccctccagctactcgccaggcgggaataatagaggccttg
cagaattttgggctttgccatactctttccacctatttaaaaggcttggaatatgaaaac
acagaatcgtgtgctgaactaaaggaaattcgttaccaggcagcttggaggaacatgcag
tgggaccacatctcttctgctaaagatgagatgggaagatcaggctaccatgaatcattg
tatgatgctctgcagtctttaagagacagagaattctctgctttccatgaaggcctgaaa
gatgccagggtgagcgaagtagaggagctatgcaaaggcagtcttgagtctgtgttttca
ttgtatcccacgctctgcagattacagaccattggagagttggaaaacataggacagctt
ttctccagatctgttactaacaagcagctgaatgacgtttatctgaagtggcagagacag
tcccagcttcttaaggacagtgattttggtttccaggagcctatcatggccctacgcact
gtaattctggagatccttcttgagaaggaaagtgagaattccaaaagagaatgcattaaa
gacattctcaccaaacatctagtggaactgtccaaattggcacgaactgccaaaaacacc
cagcttcctgagagagcaatgtttcagatcaaacaatacaatccacctatgtgtgtagtc
tctgagtggcaactggaggaagctcaggttttctgggctaaaaaagaagaaagtctagca
ctgaatattctcaaggagatgatcaagaaattggatacaaattggtttcaggttgagaat
gatccgagcctaagactgatatacacagagtgtctgaggttatgtggaaactggttagca
gaaacatgtttggaaaaccctacagttatcatgcagaaatacttagaaaaggcagtggaa
attgctgggagccacagtggagacagcagtgatgagctaaagaatggaaagatgaaggct
ttcctttctttggctcgtttctctgatattcagtaccaaagaattaagaactacatgaaa
tcctcggagtttgaaaacaagcaagctctgctgaagaaggccaaggaggaaattggcctc
ctcaaggagcacagggttcagacgaacagatacacagtgaaggttcagcgggagcttgaa
cttgatgaatgtgcaattcatgcactgagtgaggattgtgaacgtttcttgtgcaaagcg
gtagagaactacatcagttgcttacttagtggagaagagcatgatatgtggatcttccgc
ctctgctccctctggcttgagaactctggagtttctgacgtcaatgaaaagatgaagaca
attgcagaaaagattccatcatacaagtttttgcctctgatgtaccagctggctgctcga
atgggaaccaagatcatgggctgtccaggatttcatgaagttttaaataaactaatatct
agaatttcactggatcatccacatcatactttgtttatagtattggctttggcaaatgcc
aacaaggatgaactcttggcaaaaccagaggcaacaagaagaaacagactaacaaaaaat
gtaccgaaagaaatctcccagctcgatatggatcgaatggaggctgccagcaacataatt
aacaacataaagaatgggagacctcagatggttagaggtgtagaggcactttgtgatgcg
tacatcacattagcaaatctggatgcctctccatggaaatctcaaagaaaaggcataagt
attcctgctggccagcctattactaaactaaagaacttggaggatgttgttgttcccacc
atggaaattaaggtggaccctacagggaaatatgaaaatttagtgacaataagatcattc
aagccagagtttcgcttagcaggaggcctaaatctgcctaaaataatagattgtatagga
tcagatggaaaagagaggaggcaacttgtcaagggccgagatgacctgagacaggatgct
gtcatgcagcaggttttccagatgtgcaatacactgctccagcaaaacactgaaaccaga
aaaagaaaactcaccatccgaagatataaggtgattcccctttctcagagaagtggtgtc
ctggagtggtgctcagggacagctcccattggtgaattccttgtgaatcctgaagaggga
gctcacaggagatacaggccaaaagactacagcagtacttactgtcaaaagacaatgatg
gatgcacaaaaacagaattctgaagagaaatacaacatctttatggacatttgccagaat
tttcaacctgtgtttcgctatttctgcatggaaaaattcctggacccagctgtttggttt
gagaaacgattggcatatactcgcagtgtggctacatcatcaatcgttggttacatactt
ggtcttggagatagacacatacagaatatcctgatagatgagcaaactgcagaattggtg
cacatagatttaggggttgcttttgagcagggcaaaatccttcccacaccagagactgtt
ccctttaggttaaccagagacattgtggatgggatgggcatcactggtgtggagggagtc
tttagaagatgctgtgagaagactatggctgttatgagaaattcccaagaagctttgctg
actatcgtggaggtgctgctctatgatcctctctttgactggaccatgaatcctttgaaa
gcattgtatttgcaacagagaccagaggatgaggctgacatcaactccacactcaacacc
agtgatcagaaatgtaacagaaaagccagagatgaccagagttttaacaaagttgcagaa
cgtgtcctgatgaggcttcaggagaagctgaaaggtgtagaggagggaacagtgctcagt
gtgggaggacaggtgaaccttctcatacagcaggccatggatcccaaaaacctcagtcgg
ctctttccagggtggaagccctgggtatga
DBGET
integrated database retrieval system
