Chelonoidis abingdonii (Abingdon island giant tortoise): 116830982
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Entry
116830982 CDS
T07367
Symbol
ATM
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03440
Homologous recombination
cabi04068
FoxO signaling pathway
cabi04110
Cell cycle
cabi04115
p53 signaling pathway
cabi04210
Apoptosis
cabi04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116830982 (ATM)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
116830982 (ATM)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116830982 (ATM)
04210 Apoptosis
116830982 (ATM)
04115 p53 signaling pathway
116830982 (ATM)
04218 Cellular senescence
116830982 (ATM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cabi01001
]
116830982 (ATM)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cabi03032
]
116830982 (ATM)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116830982 (ATM)
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116830982 (ATM)
Enzymes [BR:
cabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116830982 (ATM)
Protein kinases [BR:
cabi01001
]
Serine/threonine kinases: Other
PIKK family [OT]
116830982 (ATM)
DNA replication proteins [BR:
cabi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116830982 (ATM)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
116830982 (ATM)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
Check point factors
Other check point factors
116830982 (ATM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
M-HEAT_ATR
TPR_ATM
HEAT_ATR
Motif
Other DBs
NCBI-GeneID:
116830982
NCBI-ProteinID:
XP_032646573
LinkDB
All DBs
Position
Unknown
AA seq
3070 aa
AA seq
DB search
MSLVLHELLVCCRQLENDKITERRKEVEKFKRLIRDSETINQLDRNSDSKQGKQLNWDAV
FRFLQKYILKETDSIRLAKPNVTASTQASRQKKMQEISSLVKYFIRCANKRAPRLKCQEL
LNYIMDIVKDASSCAIYGADCSSILLKDVLSVRKYWCEISKQQWSELLTLYCKLYLKPSR
DINRVLVARIIHTLIRGCYFQTDELNSNLFCFFEKALQCARQENASAGLDHILPAINIVF
SVYAVNCRMQICKLGEEILPMVLYIWTQYRPNESVKELIIQLLQLQVRVHHPKGAKTQEK
GAYDSAKWRRILHSLHDLLVNELSLIGSRGKYSSGSRNIAVKENLIELMADICHQVFTED
TKVLEITQSYTVTQREPGDEAAPSKRRKIELGWEIIRDNLQISQNDFDVIPWLQITARLI
SKYPMSLPNRELSPLLTILHQLLHQQRKGERTPYVLRCLTEIAVCQSQKLDLESAQKLEL
QRIWAKVWSLTIRSISFQQVETESFGLLGAIIQGNLIVIDKELWKIFSGSAYKPSSPAAR
CLALAMTAYVVPETLKVGMVQNNCEGNTGCMLKEAIMKWLLFCHLEEKMEERFELPPVLC
SDFPHLVLQKTLVSLTMKNCRAAMNFFQNATECVQHKQDKGEVSFLEIEDLYLQTTFDEM
TIFTSLAVNIADKNLSGSGLAVNQNHRETLEHCLLVVSEQLLNSYSSEIYSKSTTAEHLV
RCVNLLIGVLGCYCYAGTLTEEDACKSELFHKAKSLMHYVGESISQSKNKLNEDSRIILL
RTLITQCTNCLCNCTKSSPSKILSGLFLSLLTSKMMNDLVDICKHLMVFTGKLSDAGEVD
LMEDNIEKSAMEVDNQVAMDQFDDHCITDSGDANESGEMQSVTGAVSPLAEEHLTKQDLL
LLEILRLLCLCVTTTQIHTVCFRAPDIRRKLLMLIDKSIFDAAKSLHLQVYLVLLKELPT
EENLLPEDDFLLLLKPLSDVCSLYRRDQEVCKAILNNLLPAAVGLGQANPNVEETGEVQG
QFLTVVGAFWHLTKEGRCTAPVRVALLNCMKALLEADPHSNWAVLNVRDKHLPVSDAFPH
FLADSHHQVCMLAAKSIASLFQDMKQRDSSGLPKALPLKFQQKAFENVYLRVQEGMRELA
CGGMRPEDLLDEQCNRRAVLLMLITMVLCCSPVCEKQALFAICQSMKENGLDPHVIKKVL
ERVSNIFGYKSIEDFMTSQLDYLVLEWLRMKDNGYSLSAFPYIVLNYSSLEEFYRSCYKV
LVPHLVIRSQFEDVKSIANMIEKDWRQLLADCFPKILVNILPYFACESHRDSEIAQQRDT
AYKVYDMLKDESCLGKQQIDNLSHSNLPEVVVELLMTLHEPVNTTAGEGADLSKFTGELD
PAPNPPHFPSYVIMATLDYISSCHKTKLKSIVAVLSKNPDSFQKILLAICKQAADTNNIY
KKHRILIIYYLFVNLLLKEIKDGLGGAWAFVLRDIIYTLIHYINSRPSLGRDMSMRSFSL
CCDLLNLVCHAAVTYCKDALENHLHVVVGTLIPLVRDQPEIQKQVLGLLKYLVIDNKDNE
NLYQTIKHLDPFPEHPAFKDLRATQQKIKYGKGAFSLLEEINHFLSVSFCDSLPFARLEG
LNDLRKQLEQHKDQMKDLMKNFQEKPQDYVIVKLVVSLLQLAKTAVNHTGEKAVLEAVGS
CLGELGPIDFSTITLQHSKNAVYSKAVDLFEDRELQWVFIMLTLINNALIDDCIGVRSAA
AACLKNILATKAGNEFWEVYKNKADPMLIYLHPFRMSRKKFLEVPSNGRESPSENLDDAS
VWIPQSVSHDTWIKNLTCSLLDSGGVRNEILQLLKPMCEVKTDFCQTLLPYLIRDILLHD
SNESWRNLLSMYIQRFFTTCCRYSSSSRSTTPANSNSEPETFVSGRLDKVSRRTMLDVVD
YLRSQKRSLSGTIFDNSFWLDLNYLEVAMVAQSCAAHFTALLYTEIYADKINLDKQQERS
AFKASRNLTFEEESQSPTINSLNEKSKEETGISLQDLLMEIYRSIGEPDSLYGCGGGRML
QPLARIRTYEHEAIWGKALVTYDLEASLPPATRQAGIIEALQNFGLCHTLSTYLKGLEYE
NTESCAELKEIRYQAAWRNMQWDHISSAKDEMGRSGYHESLYDALQSLRDREFSAFHEGL
KDARVSEVEELCKGSLESVFSLYPTLCRLQTIGELENIGQLFSRSVTNKQLNDVYLKWQR
QSQLLKDSDFGFQEPIMALRTVILEILLEKESENSKRECIKDILTKHLVELSKLARTAKN
TQLPERAMFQIKQYNPPMCVVSEWQLEEAQVFWAKKEESLALNILKEMIKKLDTNWFQVE
NDPSLRLIYTECLRLCGNWLAETCLENPTVIMQKYLEKAVEIAGSHSGDSSDELKNGKMK
AFLSLARFSDIQYQRIKNYMKSSEFENKQALLKKAKEEIGLLKEHRVQTNRYTVKVQREL
ELDECAIHALSEDCERFLCKAVENYISCLLSGEEHDMWIFRLCSLWLENSGVSDVNEKMK
TIAEKIPSYKFLPLMYQLAARMGTKIMGCPGFHEVLNKLISRISLDHPHHTLFIVLALAN
ANKDELLAKPEATRRNRLTKNVPKEISQLDMDRMEAASNIINNIKNGRPQMVRGVEALCD
AYITLANLDASPWKSQRKGISIPAGQPITKLKNLEDVVVPTMEIKVDPTGKYENLVTIRS
FKPEFRLAGGLNLPKIIDCIGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQQNTET
RKRKLTIRRYKVIPLSQRSGVLEWCSGTAPIGEFLVNPEEGAHRRYRPKDYSSTYCQKTM
MDAQKQNSEEKYNIFMDICQNFQPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYI
LGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEG
VFRRCCEKTMAVMRNSQEALLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDEADINSTLN
TSDQKCNRKARDDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLS
RLFPGWKPWV
NT seq
9213 nt
NT seq
+upstream
nt +downstream
nt
atgagtctagtgctacatgagctgcttgtttgctgccgtcaacttgaaaatgacaaaatt
acagagcgaaggaaagaagttgaaaaattcaaacgtctcatccgtgattctgaaacaatt
aaccaactggatcgtaattctgactctaaacaaggaaaacaactgaactgggatgctgta
tttaggtttctgcagaaatacatcctgaaagaaactgacagtatcagattggcaaaacca
aatgtaactgcctcaacacaagcttctaggcagaaaaagatgcaagagatcagcagtttg
gtcaaatacttcattagatgtgctaataaaagagcacccagattaaaatgtcaggagctt
ctgaattatatcatggacatagtgaaagatgcatcaagttgtgctatttatggagctgac
tgtagtagcatactactaaaggatgttctttcagtgaggaaatattggtgtgagatatct
aagcaacagtggtcagaactgctgaccctgtactgcaaattgtatctcaaaccttccaga
gatattaacagagttttggtggctagaataattcacacactgatcagaggatgctacttc
caaactgatgaactaaattccaatcttttttgcttctttgaaaaagcactacagtgtgca
agacaggagaacgcctctgcaggtctggatcatattcttccagcaattaatatcgtcttc
agtgtgtatgctgtgaactgtcgtatgcagatttgtaagctaggagaagaaattcttcct
atggttctttatatatggactcagtatagaccgaacgagtctgtaaaggagttaataatt
cagttacttcaactgcaggttcgtgttcatcatccaaagggagccaaaacacaggagaaa
ggtgcatatgactcagcaaaatggcgaagaatcttacacagcttgcatgatctgctggtg
aatgagttaagtctcattggcagtagaggaaagtattcttcaggatcacgcaatattgct
gtaaaggaaaacttgattgaattaatggctgatatttgtcatcaagtctttactgaagac
accaaagtcctggagataacccagtcgtacactgttacacaaagagagcctggagatgaa
gctgcgccaagcaagcgtaggaagatcgaattgggctgggaaataattcgagacaacctg
cagatatcacagaatgattttgatgtcataccttggttgcagattacagcccgattgata
tcaaagtatcctatgagtcttcctaaccgtgaattatctcccttactcactatactacac
cagctactacatcagcagagaaaaggggaaaggaccccatatgtgctaaggtgccttaca
gagattgctgtttgtcagagccaaaaattagatttggaaagcgctcaaaagttggagctg
cagagaatctgggcaaaagtttggtctcttacaattcgcagcataagttttcagcaagtt
gaaacagaaagctttgggttacttggagccataattcaaggaaaccttattgtaatagac
aaagaactctggaagatattttcagggtctgcatacaagccttcgagtcctgctgcacgt
tgtttggcattagcaatgactgcttatgtagtaccagaaactttgaaagtaggaatggtg
cagaataattgtgaaggaaatactgggtgcatgttaaaagaagcaataatgaaatggcta
ctgttctgtcatttggaagagaagatggaagaacgttttgagttaccccctgtgctatgc
agtgattttcctcatctagtgctgcagaaaactcttgtgagcctgactatgaagaactgc
agagctgcaatgaactttttccaaaatgctactgagtgtgtgcaacacaaacaagacaaa
ggagaggtcagttttttggaaattgaagacctatatctgcagacaacttttgatgaaatg
actattttcaccagccttgcagtgaacattgcagataaaaatctgtctggttcaggactt
gctgtcaaccaaaaccatagggaaacgctggaacactgtctgttagtggtgtcagaacag
cttttaaacagctactcttctgagatttattccaagtctactactgcagaacacctagtc
cgatgtgtcaatctcttgattggtgttcttggctgctattgctatgctggcacattaact
gaagaggatgcatgtaaatcagaattgttccataaagctaagtctctcatgcattacgtt
ggagaaagtatttctcagtctaaaaataaactaaatgaagattctaggatcatcttgctg
aggactttgataacacaatgtaccaactgcttatgtaattgtaccaagagcagtccaagt
aagatcttatcaggcttattcctgagtttgttaacatcaaagatgatgaatgatcttgta
gatatttgcaaacatctgatggtctttactggcaaactgagtgatgctggagaagtagac
ctaatggaagataatattgagaaaagtgcaatggaagtagataaccaggtagccatggac
cagtttgatgatcactgtatcactgactccggtgatgctaatgagtctggggagatgcaa
agcgtaactggtgctgttagcccattagctgaagaacatttgacaaagcaggatttactc
ctccttgaaattctgaggctcttgtgtctatgtgtaactacaacacaaatccatacagtc
tgcttcagagcacctgacatacgacggaagctgttaatgctaattgataaaagtatattt
gatgctgctaaatcactgcatctacaagtgtatttagtccttttgaaggaactcccaact
gaagaaaatttgttgccagaagatgattttctcctgcttctcaagcctctttctgacgtg
tgttccttgtatcgtcgagatcaagaagtttgtaaagcaattctaaataacctacttcct
gcagcagtggggttgggccaagccaacccaaatgttgaagaaacaggggaagtccaagga
caatttttaactgttgtgggagcattttggcacttgacaaaggaagggagatgtacggct
ccagtaagagtggccctgctgaactgcatgaaagccctacttgaggctgatcctcattca
aattgggctgtgcttaacgtaagagataaacatctgcctgtgagtgatgctttcccacat
ttcctcgcagatagccaccatcaagtgtgcatgctcgctgcaaagtcaatagccagtttg
ttccaagatatgaaacagagagattcttctggattaccaaaagctcttcctttgaagttc
cagcaaaaggcctttgagaatgtatacctcagagttcaagaaggaatgagagaactggca
tgtggtggaatgcgccctgaagacctattggatgagcagtgcaatagaagagcagttctg
ctgatgctgataaccatggttttatgttgcagtcctgtgtgtgaaaagcaggctttgttt
gctatttgccagtctatgaaagaaaatggattggaccctcacgttataaaaaaggttttg
gagagagtatcgaacatttttggctataaaagtatagaagacttcatgacttcccaatta
gactatctggtgctggagtggctgagaatgaaagataatggatatagcctatctgctttt
ccttacattgttttgaactactctagccttgaggagttctacaggtcttgttataaagtt
ttggttccacacctggtgatcagaagtcagtttgaagatgtgaaatctattgctaacatg
attgaaaaagactggcggcagcttctagcagactgctttccaaagattcttgtaaatatc
cttccctattttgcctgtgaaagccatagagatagtgaaatagcacaacagagagataca
gcttataaagtctacgacatgcttaaggatgaaagctgcttaggaaaacagcagattgac
aatttatctcacagtaacttgccagaggttgtggtggagctgctgatgaccctgcatgag
ccagtcaacaccacggcaggagaaggagctgatctaagtaaatttacaggggaactagac
cctgctcctaatcctcctcattttccatcttatgtgatcatggcaaccttggattatatt
agcagttgtcacaaaaccaagttaaaaagtattgtagctgtactttctaaaaatcctgat
tcattccagaaaatcttactagccatttgcaaacaagcagctgatacaaacaatatttac
aaaaaacacaggattcttataatttattacttatttgttaacttgttacttaaagagata
aaggatggtttaggaggagcatgggcttttgttcttcgagatataatatataccctgatt
cactacatcaacagcagacccagtcttggcagagacatgtccatgcgcagcttttctctc
tgctgtgaccttctaaatcttgtttgccacgcagcagtcacatattgtaaggatgccctc
gagaatcatcttcatgttgttgttggaacactaatacctcttgtcagggaccagcctgaa
attcagaagcaggtcctaggcttgttgaagtacctagtgatagataacaaggataatgaa
aacttgtaccaaacaatcaaacatttagatccttttcctgagcatcctgcttttaaagat
ttgcgtgctactcagcagaaaatcaaatatggtaaaggagcattttcacttttggaggaa
attaaccacttcttatcagtaagtttctgtgactcactgccatttgcaagacttgaagga
ttaaatgatttacgcaaacaactggaacaacataaagatcagatgaaggatctcatgaaa
aacttccaggaaaaaccccaagactatgtcatagtaaagttggtggtgagcttgctacaa
ctggccaagacagcagttaatcatacaggtgaaaaggcagttttagaggctgttggaagt
tgtttgggagaactgggtcctatagatttctccaccataactctgcaacatagtaaaaat
gcagtctattctaaagcagttgacttatttgaagatagagaacttcagtgggtcttcata
atgctaactctaataaataatgctttaatagatgattgtattggtgttcgatctgctgct
gctgcctgtttgaaaaacattttagccaccaaggctggtaatgaattttgggaggtttac
aaaaacaaagctgatcccatgttaatatatctccatcctttcagaatgtctcgaaagaag
tttttagaagtaccaagtaatggaagagagagtccttcagaaaatctagatgatgcaagt
gtgtggattcctcagagtgtaagtcatgatacttggatcaagaacctgacttgttcatta
ctggacagtggaggtgtgagaaatgaaattcttcagttactgaaaccaatgtgtgaggtg
aaaacggacttttgtcagactttgctcccgtacctgattcgtgatatcctgcttcatgat
tcaaatgaatcttggcgaaatcttctgtccatgtatatacagaggtttttcacaacttgt
tgcagatactcctcatccagcagatcaactacacctgcaaattccaattcagaaccagaa
acctttgttagtggacgtttagataaagtatctcggcgaacaatgcttgatgttgttgat
tacttgagaagtcaaaagagatctctttcaggtaccatttttgataacagtttctggctg
gatttgaattaccttgaggttgctatggtagcacaatcttgtgctgctcacttcacagct
ttgctctacacagaaatctacgcagacaagataaacttagataaacaacaagaaagatct
gctttcaaagcatctagaaatctaacatttgaagaagaaagccaaagtccaactattaac
agtttgaatgagaaaagtaaagaagaaactggaataagcttacaggaccttctcatggaa
atatacagaagtataggagagcctgatagtctctatggctgtggtggaggaagaatgtta
cagccattagctaggataagaacatatgagcacgaggccatatgggggaaggcccttgta
acatatgaccttgaagcaagtctccctccagctactcgccaggcgggaataatagaggcc
ttgcagaattttgggctttgccatactctttccacctatttaaaaggcttggaatatgaa
aacacagaatcgtgtgctgaactaaaggaaattcgttaccaggcagcttggaggaacatg
cagtgggaccacatctcttctgctaaagatgagatgggaagatcaggctaccatgaatca
ttgtatgatgctctgcagtctttaagagacagagaattctctgctttccatgaaggcctg
aaagatgccagggtgagcgaagtagaggagctatgcaaaggcagtcttgagtctgtgttt
tcattgtatcccacgctctgcagattacagaccattggagagttggaaaacataggacag
cttttctccagatctgttactaacaagcagctgaatgacgtttatctgaagtggcagaga
cagtcccagcttcttaaggacagtgattttggtttccaggagcctatcatggccctacgc
actgtaattctggagatccttcttgagaaggaaagtgagaattccaaaagagaatgcatt
aaagacattctcaccaaacatctagtggaactgtccaaattggcacgaactgccaaaaac
acccagcttcctgagagagcaatgtttcagatcaaacaatacaatccacctatgtgtgta
gtctctgagtggcaactggaggaagctcaggttttctgggctaaaaaagaagaaagtcta
gcactgaatattctcaaggagatgatcaagaaattggatacaaattggtttcaggttgag
aatgatccgagcctaagactgatatacacagagtgtctgaggttatgtggaaactggtta
gcagaaacatgtttggaaaaccctacagttatcatgcagaaatacttagaaaaggcagtg
gaaattgctgggagccacagtggagacagcagtgatgagctaaagaatggaaagatgaag
gctttcctttctttggctcgtttctctgatattcagtaccaaagaattaagaactacatg
aaatcctcggagtttgaaaacaagcaagctctgctgaagaaggccaaggaggaaattggc
ctcctcaaggagcacagggttcagacgaacagatacacagtgaaggttcagcgggagctt
gaacttgatgaatgtgcaattcatgcactgagtgaggattgtgaacgtttcttgtgcaaa
gcggtagagaactacatcagttgcttacttagtggagaagagcatgatatgtggatcttc
cgcctctgctccctctggcttgagaactctggagtttctgacgtcaatgaaaagatgaag
acaattgcagaaaagattccatcatacaagtttttgcctctgatgtaccagctggctgct
cgaatgggaaccaagatcatgggctgtccaggatttcatgaagttttaaataaactaata
tctagaatttcactggatcatccacatcatactttgtttatagtattggctttggcaaat
gccaacaaggatgaactcttggcaaaaccagaggcaacaagaagaaacagactaacaaaa
aatgtaccgaaagaaatctcccagctcgatatggatcgaatggaggctgccagcaacata
attaacaacataaagaatgggagacctcagatggttagaggtgtagaggcactttgtgat
gcgtacatcacattagcaaatctggatgcctctccatggaaatctcaaagaaaaggcata
agtattcctgctggccagcctattactaaactaaagaacttggaggatgttgttgttccc
accatggaaattaaggtggaccctacagggaaatatgaaaatttagtgacaataagatca
ttcaagccagagtttcgcttagcaggaggcctaaatctgcctaaaataatagattgtata
ggatcagatggaaaagagaggaggcaacttgtcaagggccgagatgacctgagacaggat
gctgtcatgcagcaggttttccagatgtgcaatacactgctccagcaaaacactgaaacc
agaaaaagaaaactcaccatccgaagatataaggtgattcccctttctcagagaagtggt
gtcctggagtggtgctcagggacagctcccattggtgaattccttgtgaatcctgaagag
ggagctcacaggagatacaggccaaaagactacagcagtacttactgtcaaaagacaatg
atggatgcacaaaaacagaattctgaagagaaatacaacatctttatggacatttgccag
aattttcaacctgtgtttcgctatttctgcatggaaaaattcctggacccagctgtttgg
tttgagaaacgattggcatatactcgcagtgtggctacatcatcaatcgttggttacata
cttggtcttggagatagacacatacagaatatcctgatagatgagcaaactgcagaattg
gtgcacatagatttaggggttgcttttgagcagggcaaaatccttcccacaccagagact
gttccctttaggttaaccagagacattgtggatgggatgggcatcactggtgtggaggga
gtctttagaagatgctgtgagaagactatggctgttatgagaaattcccaagaagctttg
ctgactatcgtggaggtgctgctctatgatcctctctttgactggaccatgaatcctttg
aaagcattgtatttgcaacagagaccagaggatgaggctgacatcaactccacactcaac
accagtgatcagaaatgtaacagaaaagccagagatgaccagagttttaacaaagttgca
gaacgtgtcctgatgaggcttcaggagaagctgaaaggtgtagaggagggaacagtgctc
agtgtgggaggacaggtgaaccttctcatacagcaggccatggatcccaaaaacctcagt
cggctctttccagggtggaagccctgggtatga
DBGET
integrated database retrieval system
