Chelonoidis abingdonii (Abingdon island giant tortoise): 116831079
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Entry
116831079 CDS
T07367
Symbol
PDS5A
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116831079 (PDS5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116831079 (PDS5A)
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116831079 (PDS5A)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
116831079 (PDS5A)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
116831079 (PDS5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
EnP1_C
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
116831079
NCBI-ProteinID:
XP_074922611
LinkDB
All DBs
Position
5:100589068..100776333
Genome browser
AA seq
1359 aa
AA seq
DB search
MLHLPELHERPVEDCGEGKFITSGTRMDFPATQSKPPADGKIIYYPPGVKEITDKITNDE
VVKRLKMVVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRI
YAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDC
NEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNL
NKQAFDLAKVLLKRTVQIIEACIANFFNQVLVLGKSSVSDLSEHVFDLIQELFAIDPQLL
LSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNFPNKLSF
VVHLQQKHLSILFMVTVVDFFIVTEYLKVRSHDPEEAIRHDVIVTIITAGKRDLSLVNDQ
LLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHAEAGKDAAEKVSWIKDKLLHIYYQNS
IDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRE
LLDLHKQPTSEANSSAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLIS
PTCSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKS
IEGTADDEEEGVSPDTAIRAGLELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAA
IQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQLAQIF
EPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKN
GKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQK
RISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHK
ALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMANEKLLSLLP
EYVVPYMIHLLAHDPDFTKPQDVDQLRDLKECLWFMLEVLMTKNENNSHAFMKKMAENIK
LTRDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPKDPVLPTKFFTQPEKDFCND
RNYITEETRVLLLTGKPKPTGVLGAVNKPLSATGRRPYIRSTGSETGSNISVNSELSSPA
GNRSREQSSDISETGVSENDENPVRIISVTPAKTEPVKNKEIHSDQATQGNISTERGKKR
TAVAAGSENIHQKTEEKKADESGPPAPPKPRRGRPPKSESQGTTVKNDETNKPSGRGRKR
AAVSQESSGSLEAGNAKAPKQQDIAKKAAPAQRQIDLQR
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaccttccggagctgcatgagaggccggtagaggactgtggagaaggaaagttt
ataaccagtggcaccaggatggactttcctgctacccaatcaaaacctccagccgatggc
aagatcatctactatcctcccggagtaaaggagataacagacaaaattacgaacgatgag
gtggtcaaacggttgaagatggtagtaaaaaccttcatggacatggaccaggactcggaa
gatgagaaacagcagtatctccctttagccttgcatcttgcatctgaattcttcctcagg
aatcccaacaaagatgtgcgtctccttgtagcatgttgcttggctgatatattccgaatt
tatgctccagaagcgccatatacatcccatgataaacttaaggacatatttttgtttatt
acaagacagttaaaaggcttggaggacactaagagcccccagtttaaccgatacttttac
ttattagagaatttagcttgggttaaatcttacaacatctgctttgagttggaagattgc
aatgaaatttttattcagctttttaggactcttttttcagtcataaacaatagtcacaac
cagaaggtacaaatgcacatgctggatttgatgagttctatcatcatggagggtgatgga
gtaactcaagagctcctggactccattctcattaacctcattcctgcacacaagaacctt
aataaacaagcatttgatcttgcaaaagtcttgttgaaaaggactgtccagattattgaa
gcatgtatcgccaatttttttaaccaggttctggtactgggaaagtcttcagtaagtgac
ttgtcagaacacgtatttgatctgatacaagagctgtttgccatagatcctcagttattg
ctgtctgtcatgccacagcttgagttcaaactgaagagtaatgatggagaagagcgcttg
gctgttgttcgacttctggctaaactatttggctctaaagattctgatctggcaacacaa
aatcgtcctctttggcaatgctttcttggacgttttaattttcctaataaactgtcattt
gttgtgcatctgcaacaaaagcacttgagtatacttttcatggttaccgttgttgatttt
tttattgtaacagagtacttgaaggttagatcacatgacccggaagaagccattcgacat
gatgtcattgttacaattataacggctgggaagagagacctttctttagtcaatgaccag
ctacttggctttgtaagggaaagaactctagataaacggtggcgagtaagaaaagaagct
atgatggggcttgcccagctatacaagaagtattgtcttcatgctgaggctggcaaagat
gctgcagagaaagtgagctggataaaggataaacttttgcacatatattatcagaatagc
attgatgacaagttactggtagagaaaatctttgcccagtatcttgtcccacacaatttg
gaaacagaagagagaatgaaatgcttgtattatttatatgctagcttggatccaaatgct
gtcaaagcactgaatgagatgtggaagtgccagaatatgcttaggagtcatgtacgagaa
ttattggacttgcataagcagcccacttcggaagcaaatagtagtgccatgtttggaaag
ctgatgaccatagcaaaaaaccttccagatcccggaaaagcacaagattttgtgaagaaa
ttcaatcaggttcttggggatgatgagaaacttcgatctcagctcgagttgttaatcagc
cctacatgttcatgtaaacaggcagatgtctgtgtgcgggagatagcccggaagcttgca
aatcccaagcagccaacaaatcctttcctggagatggtcaaatttcttttggaaagaatt
gccccggtgcacattgactcagaagccattagcgcactagtaaagctgatgaataaatct
atagaggggacagctgatgatgaagaggagggtgtaagtcctgatactgctattcgtgca
ggacttgaacttctcaaggttttgtctttcacacatcctacctcgttccactctgcagag
acatatgagtctctccttcagtgcctcaggatggaagatgataaggtagctgaggcagct
attcagattttcagaaacacaggccacaaaatagaaacagacctgccgcagataagatcg
acattaattcctattttgcatcagaaagcaaagagaggtactcctcaccaagcaaaacag
gctgtccattgtatacatgccattttctcaaataaagaagtgcaacttgcgcagatcttt
gagcctcttagtagaagtttgaatgctgatgttccagagcaacttataactccattagtc
tctttgggccacatttctatgttagctccagaccagtttgcttctccaatgaaatctgtg
gttgcaaattttatcgtgaaagatctcctcatgaatgataggtcaacaggtgagaaaaat
gggaaattgtggtccccagatgaagaagtttccccagaggttctagcaaaggtgcaagca
attaaacttttggtacgctggctcttgggtatgaaaaacaaccagtctaaatctgcaaat
tcaacactccggttattatcagctatgttggtcagtgaaggagacttaacagaacagaag
agaatcagtaaatcagatatgtctcgtctccgactggctgctggtagtgccataatgaag
cttgcacaggaaccttgttaccatgaaataattaccccagagcagttccagctctgtgct
cttgtcattaatgatgagtgttaccaagtgagacagatatttgctcagaagctgcacaag
gcacttgtgaagttactgctcccattggaatacatggcaatctttgccttgtgtgccaaa
gaccctgtgaaagagagaagagcacatgccagacagtgtttgctcaaaaatatcagtata
cgaagagagtatattaagcagaaccctatggctaatgaaaagctgttatctctgctgcct
gaatatgtggtaccatatatgattcatttactggcacacgatccagatttcacaaaacct
caggatgtcgatcagcttcgtgatctcaaagagtgcctgtggttcatgcttgaagtttta
atgacaaagaatgagaacaacagccatgccttcatgaaaaaaatggcagaaaacatcaag
cttacccgtgatgctcagtctcctgatgagcctaaggccaatgaaaaactctacacagta
tgtgatgtagcactgtgtgtaatcaacagcaagagtgctttatgtaatgcagattcacca
aaggaccccgtattgccaactaaattttttacgcaacctgaaaaggacttctgtaatgac
aggaattatattacagaagagacaagggttcttcttttaacgggaaagccaaagccaact
ggtgtattaggtgcagtaaataaaccattatctgcaactggaaggagaccttatattaga
agcacaggatcagagactggaagcaatattagtgtaaactcagagctgagctctcctgca
ggaaacagatcaagggaacagagttcagatatatcagaaactggggtcagcgaaaatgat
gaaaatccagtgaggattatttcagtcacgccagcaaagacagaacctgtgaaaaacaag
gagattcattctgatcaggctacacaaggaaacattagcactgaacgtggaaaaaaaaga
acggcagtggcagctggatcagaaaacattcatcaaaaaacagaagaaaaaaaagcagat
gaatcaggaccaccagcccctcccaaacctaggagagggcgtccaccaaagtctgaatct
cagggcactacagtaaagaatgatgaaacaaacaaaccatctggcaggggaaggaaaagg
gcagcagtcagtcaagagagttcagggagtttagaggcaggtaatgccaaagcaccaaaa
cagcaagacatagcaaaaaaagcagcaccagcacagagacaaattgatctacaaaggtaa
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