Chelonoidis abingdonii (Abingdon island giant tortoise): 116831080
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Entry
116831080 CDS
T07367
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cabi03037
]
116831080 (NPHP1)
Cilium and associated proteins [BR:
cabi03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116831080 (NPHP1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
hSH3
DUF3295
NOA36
Motif
Other DBs
NCBI-GeneID:
116831080
NCBI-ProteinID:
XP_032646727
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MLGRVVRACLHRTLTFGTRGDDDLLSPRAFVSLATMSARRGRSPLQRAQRRGRELRQQVD
ALLADSKERGPLDPAKKKYLFQRCMELKKSVDENTSVLQNLKKTDEPAPVGNYNQRKEEE
EKQLFKLSQQLQKLAAVLSQDNVTKGYTLDGKCQNSPQTEQENEEEEDEDEESSVEEDAE
EEEDEEEDDDDELEDQPTIKECITVGDFVAQQEGDLTFKKGEVLLILDKKPDGWWIATNS
KGERGLVPKTYLMACNKGVGQEPSEEESEEDIEVVDETADKTEIKRRTDSHWSAVRKAIT
ENNTIDVLATMGAVPAGFRPSTLSQLLEEGNQFQASYFIQPELTPSQLAFKDLIWNPEKD
TIQPRPTRVSLILTLWSCKMIPLPGVSIQVLSRHVRLCLFDGNRVLSNIHTVRAAWQPKN
PKTWTFSPRVTGILPSLLDGDCFIRSNSSSPDIGILFELGITYIRNSTGARGELSCGWAF
LKLFDSSGIPVSSKTYELLLNGGTAYERGVEMDPSISRRASSSVFHQMITLKKQPQLLVK
LRSLSTRSKGILNLLPETLIGSMCYIHLLIFYRQILSDVLLKDRISMQSADLISNPILAT
FPKLMEQPDLMDALRSAWAEKESTLKRSEKRDREFLKSVFFLVYHDCVFPLLQSTFLPEH
KWADEESEASRWKVIADFLKRNQEKDSALYSLLSSESVHKAFDISEIAYDFLGQARKSSA
SV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctgggacgtgtagttcgcgcctgtctccaccgcactctgacgttcgggacgcgcggc
gatgacgatcttctgagccctcgagcgttcgtctccttagcgacgatgtccgcgcggcgg
ggtcggagcccgctgcagagggctcagcggcgcggccgcgagctgcggcagcaggtggat
gcattgcttgctgacagcaaggagagggggcccctagaccctgcgaaaaaaaagtacctt
tttcagagatgtatggagttgaagaaatcagtggatgaaaacacatctgttcttcaaaac
ttgaaaaaaactgatgagcctgcacctgtggggaattataatcagagaaaagaggaggaa
gaaaaacaattgttcaaactctctcagcagctccagaaacttgctgcagtcctgagtcag
gacaacgtgaccaagggttatactttagatgggaaatgtcaaaatagtcctcaaacagaa
caggaaaatgaggaagaggaggatgaggatgaagaaagtagtgtagaggaagatgctgaa
gaggaggaggatgaagaagaggatgacgacgatgaattggaagatcaaccaacaattaaa
gaatgtatcacggttggtgattttgttgctcagcaggaaggggatctcacatttaagaaa
ggtgaagtgttgctcatacttgacaaaaagcctgatggttggtggattgctacaaattcc
aaaggggagagaggccttgttcctaaaacctatctcatggcgtgcaataaaggagttggc
caagagccaagtgaagaggaaagtgaggaagacatagaggtggttgatgaaacagcagat
aagactgaaattaaaagaagaacagattctcactggagtgctgttagaaaagctatcaca
gagaataataccattgatgtgttggcaaccatgggagctgttcctgcaggattccgacca
tcaactctctcccagctcttagaagaaggaaatcagtttcaagccagttacttcatacag
cctgaattgactccttcacaactggctttcaaagacctaatatggaaccctgaaaaagac
actattcagccaagaccaactcgagtatcactgattttaactttatggagttgtaaaatg
attcctcttccaggagtgagcatacaggttctcagtagacatgttcgactctgtcttttt
gatggtaacagggtactgagtaacattcatacagttagagctgcatggcaacctaaaaat
cccaagacatggactttctctccacgggtaacaggcatcttacccagcctgcttgatggt
gactgtttcatcaggtccaattcttcatctccagacattggtatattatttgaacttggc
atcacttatattcggaattcaactggtgcaagaggagagttaagctgtggctgggcattt
ctaaaactcttcgactccagtggaattccagtttcttccaagacgtatgagctgcttttg
aatggtggcacagcctatgagagaggtgttgagatggacccatcaatatcaagaagagca
agcagtagtgttttccatcagatgataacactgaagaaacagcctcaacttctagtgaaa
ctgagatcattaagcacacgatcaaaaggcatcctgaatctgctaccagaaacattaatt
ggcagtatgtgctacattcatctcttgatattttatcgacaaattctcagtgatgtgctg
ctaaaggacagaataagcatgcaaagtgctgatttaatcagtaatcctattttagcaaca
ttccccaaactcatggagcagcctgaccttatggatgcacttaggagtgcttgggcagaa
aaggaaagcactttaaagcgatcagaaaagagagaccgagaatttctgaagtctgtgttt
ttcctggtgtaccatgactgtgtcttccctcttctccagtcaactttcctcccggagcac
aaatgggcagacgaagagtctgaagcctcacgctggaaagtgattgctgacttcctgaag
cggaaccaagaaaaagacagtgcactctactctctgctctcctcagaaagtgttcacaaa
gctttcgatatttcagagatcgcatatgacttcttaggacaagcgaggaagagcagtgcc
tcagtttga
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integrated database retrieval system
