Chelonoidis abingdonii (Abingdon island giant tortoise): 116831488
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Entry
116831488 CDS
T07367
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116831488 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116831488 (HDAC5)
Enzymes [BR:
cabi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116831488 (HDAC5)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
116831488 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
116831488
NCBI-ProteinID:
XP_032647415
Ensembl:
ENSCABG00000004644
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MLLMSRALGLPAMLQTIYESESCFSSDGVSGREQSLELLSRTPLHGLSVAAVDVKSVLPV
AMQNSCGSGRSGSSPVDLRTETRGSVPSVDPAVREQQLQQELLVLKQQQQLQKQLLFAEF
QKQHEHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRKQEQLRQEELEKQRLEQQLLIL
RNKEKSKESAIASTEVKLKLQEFLLSKSKELTAGGFNHSLPQHPKCWGAHHTSLDQSSPP
QTGSPGTPPSYKLPLLGTYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDG
TVISTFKKRAIEITVSSMCNSAPGSGPSSPNSSHSTIAENGFTGSAPNIHTEQLLPQHRA
LAMDSSASQLSLYTSPSLPNISLGLQATVTVTNSHLNASPKLSTQQEAERQAIQSLRQGG
ALTGKFMSTSSIPGCLLGVTLEGETNSHGHASLLQHVLLLEQARQQNTLIAVPLHGQSPL
VTGERISTNMRTVNKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQQIQ
LGKIITKTGELPRQPTTHPEETEEELTEQQEALLEDTVPLGPVGFVVDGSPESESTQDEL
EEDEGGEPVKDEGGVSGDEEEHIDSPEVEELGVAYKQVFPDAQQLQPIQLFPASLTITTL
PHQALSRTQSSPATAGIKNTVAEPPVKHLFTTGVIYDTFMLKHQCMCGNTNIHPEHAGRI
QSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEHHTLLYGTSPLNRQKLDSKKLLGPV
SQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVASGELKNGFAVIRPPG
HHAEESTAMGFCFFNSVAIAAKLLQQKLSVGKILIVDWDIHHGNGTQQAFYSDPNVLYIS
LHRYDNGNFFPGSGAPEEVGSGMGVGYNVNIAWTGGVDPPIGDVEYLAAFRTVVMPIANE
FSPDVVLVSAGFDAVEGHLSPLGGYSVTAKCFGHLTKQLMKLAGGRVVLALEGGHDLTAI
CDASEACVSALLGVELDPLDQALLQQKPNVNAVATLEKVIEIQSKHWSSVKRCASVVSCS
LLEAQKGEAEEAETVSAMASLSVDAEQGSTDCSPRQVDEPMEAEPVL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcatgtccagggcactgggactgcccgcgatgttgcagactatttacgagagc
gaatcgtgtttttcttcagatggggtatccggacgcgagcagtcgttggagctcctttcg
cggactccgctccatggcctctctgtggcagcggtagacgtgaagtcggtgctgcccgtg
gccatgcagaactcctgcggcagcggcaggagtggcagcagcccggtggacctgcggaca
gagacccggggcagcgtgcccagcgtggaccccgcggtgcgggagcagcaactgcagcag
gagctgctggtcctgaagcagcagcagcagttgcagaagcagctgcttttcgccgagttc
cagaagcagcacgagcacttgacgcggcagcacgaggtccagctgcagaagcacctcaag
cagcagcaggagatgctggcagcaaagcggcagcaggagctggagcagcagcgcaagcag
gagcagctgcggcaggaggagctggagaagcagcggctggagcagcagctcctcatcctc
cggaacaaggagaagagcaaagaaagtgccatcgccagcacggaagtgaagctaaagctc
caggagttcctactcagcaagtcaaaagagctgaccgcaggcggcttcaaccattccctc
ccacagcaccccaaatgctggggagcccatcatacctcgttggaccagagttcccctccc
cagacaggcagcccgggaacaccgccctcctacaaactacccctactcggcacatacgac
agcagagatgactttccgctccggaaaaccgcctcggaacccaacttaaaagtgcgctcg
cgattaaaacagaaggtggccgagcgcaggagcagccccctgctgcggaggaaagacggg
accgtcatcagcacgttcaaaaagagagccattgagatcacggtctcctccatgtgtaac
agcgccccagggtccggtcccagctccccgaacagctcccacagcaccatcgctgagaat
ggcttcactggctctgcccccaacatccacaccgagcagctgctcccccagcacagagcc
ctggccatggacagctcagctagccagctcagtctctatacctccccgtccctgcctaac
atctccctgggactgcaggcaacggtcaccgtgaccaactcgcacctcaacgcttccccg
aagctctccactcagcaagaggcggagcgccaggccatccagtcgctgcgccagggcggg
gccctcacgggcaagttcatgagcacctcgtccatccccggctgcctgctgggggtcacc
ctggagggtgagaccaacagccatgggcacgcctccctgctgcagcacgtgctgctcctg
gagcaggcccgccagcagaacacgctgatcgccgtcccgctccatggccagtccccgctg
gtgacaggcgagcgcatctccaccaacatgcggacggtcaacaagctaccccggcaccgc
ccgctgagccgcacccagtcgtccccgctgccccagagcccccaggccctgcagcagctg
gtcatgcagcagcagcaccagcagtttctcgagaagcagaagcaacagcagcagattcag
cttggcaagatcatcaccaagacgggtgagctgccccgccagcccaccacgcacccagag
gagacggaggaggagctgacggagcagcaggaggcactgctggaggacacggtgcccctg
gggccagtgggtttcgtggtggatggctcgccggagagcgagagcacgcaggatgagctg
gaggaggacgagggcggcgagccagtgaaggacgaggggggcgtgagcggggacgaagaa
gagcacatcgactcaccggaggtggaggagctgggtgtggcttacaagcaggtgttcccc
gatgctcagcagctgcagcccatccagctcttcccagcttccctgaccatcaccaccctg
cctcaccaagcgctgagccggacccagtcctcgcccgccaccgcaggcatcaagaacacg
gtggctgaacccccggtcaaacacctgttcactactggcgtgatctacgacacgttcatg
ctaaagcaccagtgtatgtgcgggaacactaacattcacccagagcatgctgggagaatc
cagagcatctggtccaggctccaggagaccggcttgctgagcaagtgcgagcggatccgg
ggcaggaaagcgacgctggatgaaatccagacggtccattcggagcatcacacgttgctg
tacggaaccagccccctcaaccgacagaaactcgacagcaagaagctgctaggtcccgtc
agccagaagatgtatgcggtcctgccctgcggcggcatcggggtggacagcgacacggtg
tggaacgagatgcactcgtccagcgccgtccgcatggccgtgggctgcttggtggagtta
gccttcaaggtggcctcaggagagctcaagaatggatttgccgtcatccggcccccgggg
caccacgcggaggaatccacggccatgggcttctgcttcttcaactccgtcgccatcgct
gccaagctgctccagcagaagctcagcgtcggcaagatcctcattgtggactgggacatt
caccatggcaatggcacccagcaagccttctacagtgaccccaatgtgctgtacatctcc
ttgcaccgctacgacaacggcaacttcttcccaggcagcggggcccccgaggaggttggc
agcgggatgggggtggggtacaacgtcaacatagcctggacgggcggagtggaccccccc
atcggcgatgtggagtatctggccgcgttcaggacggtggtgatgccaatagccaacgag
ttctccccggatgtggtcctggtctctgccggcttcgatgcagtcgagggacacctgtct
cccctgggtggctactccgtcacggcgaaatgtttcgggcacctgaccaagcagctgatg
aagctggccggcgggcgcgtggtgctggctttggaggggggtcatgacctgacagccatc
tgcgacgcctcagaagcctgtgtctccgccctgcttggcgtggagctggaccccctggat
caagctctcctgcagcaaaagccaaatgtaaatgcggtggccacgctggagaaggttatt
gaaatccagagcaaacactggagctctgtgaagcgctgtgcctcggtggtcagctgttcc
ttgctggaggcgcagaagggagaagccgaggaggcagagacagtaagtgccatggcatcg
ctctcggtcgatgccgaacaaggaagcacagactgcagccccagacaagtggatgagccg
atggaggcagagcctgttttgtga
DBGET
integrated database retrieval system
