Chelonoidis abingdonii (Abingdon island giant tortoise): 116831669
Help
Entry
116831669 CDS
T07367
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116831669 (SOX1)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116831669 (SOX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116831669
NCBI-ProteinID:
XP_032647732
UniProt:
A0A8C0HDP7
LinkDB
All DBs
Position
1:complement(260896336..260899246)
Genome browser
AA seq
368 aa
AA seq
DB search
MYSMMMETDLHSPGGAQGPTNLTGQTGAGGGGGGGGGGNKANQDRVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPAGVGQAAGEPRRHGQRGYAHM
NGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGSGGHPHHPHPHHPHPHNPQPMHRYDM
SALQYSPISNSQGYMSASPSGYGAISYGAQPHQNSAAAAAAAAAAAAASSGALGALGSLV
KSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAQSRLHSLPQHYQSASTGVN
GTVPLTHI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggaaacggacttgcactccccaggcggagcccagggccccact
aatctaacgggccagaccggagcaggaggcggtggaggcggcggcggcggtgggaacaaa
gcgaaccaagaccgggtcaagagacccatgaatgccttcatggtgtggtcccggggccag
cgccggaagatggcccaggagaaccccaaaatgcacaactcggagatcagcaagcgcctg
ggggccgagtggaaagtcatgtccgaggccgagaaaagacccttcatcgacgaagcgaag
cggcttcgggcgctgcacatgaaggagcatccggattataaataccggccccgcaggaag
accaagaccctgctcaagaaggacaagtactcgctggctggggggctgctcagcgccggc
tcggcagggggcggccccgccggggtcggggtgggcatgggggtcggggtaagccccgcc
ggcgtgggccaggcggctggagagccccggcggcacggccagcgggggtacgcgcacatg
aacggctgggctaacggcgcctacccgggctccgtggccgcggcggcggcggcggccgcg
atgatgcaggaggcgcagctcgcctacgggcagcacccaggcagcggcgggcacccgcac
cacccgcacccgcaccacccacacccgcacaacccgcagcccatgcaccgctacgacatg
agcgcgctgcagtacagccccatctccaactcgcagggctacatgagcgcctcgccctcg
ggctacggggccatctcctacggcgcccagccccaccagaactcggccgcggcggccgcg
gcggccgctgccgcggcggcggcttcctccggagctctgggcgccttgggctcgctggtc
aagtcggagcccagcgtgagcccgcccgtcacctcgcactcacgggccccgtgccccggg
gacctgcgggagatgatcagtatgtacttaccggccggagaaggaggggacccggctgcg
gctcagagccggcttcactccctgccccagcattaccagagcgccagcacgggggtcaat
ggcacggtccccttgacacatatctga
DBGET
integrated database retrieval system
