Chelonoidis abingdonii (Abingdon island giant tortoise): 116831998
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Entry
116831998 CDS
T07367
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116831998 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
116831998 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
116831998 (PDLIM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116831998
NCBI-ProteinID:
XP_032648286
Ensembl:
ENSCABG00000017972
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MSSHRVALQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAIANLCIGDVIMAIDGENTDN
MTHLEAQNKIKSCIDEITLTVGRTESKVWSPLVTEEGKPNPYKMNLASQPQRPAQFQRAF
SMTYQPLKSPSDRNSRLSPPGFQAPFATVYNPLQPHTSLPPLQRRHSTSSIPSQVRVGPE
QLKQAAQICPNSPVEVEVPGLKVVHVQFNSPLQLYSQRNILDTLQGQISSVSPAFPSLEQ
HNQPSNNLVIDKESEVYKMLQETEDPREPPRQSASFLVLQEILESEGDPNKPSGFRSVKP
PMTKVASSIGNAQKLPICDKCGSGIVGAFVKLRDKHRHPECYVCSDCGTNLKQKGHFFVE
DCIYCETHARERVTPPEGYEVVTVFPK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccaccgcgtcgctctgcagggcccggggccctggggcttccgcctggtgggg
ggcaaggacttcgagcagccgctcaccatctctcgggtgactcctggcagcaaagcagca
atagccaatttatgtataggagatgtcatcatggcaattgatggggagaacacagataac
atgacacacttagaagcacagaacaaaatcaagagctgcatagatgagataactctgaca
gttggcagaacggaatccaaagtctggtcccctctggtgacagaggagggaaagcccaat
ccatacaagatgaatctggcatctcaaccccagagaccagcgcagtttcagcgtgcgttc
agcatgacataccagcccttaaaatcaccctctgaccgaaacagccgtttatcgcctcct
gggttccaggcaccttttgcaacagtctataatcctctccagccgcatacctccttgcct
ccattgcaaaggaggcacagcacctcctccatcccaagccaagtgagagtgggccccgaa
cagctaaaacaagccgctcagatctgccccaacagccctgtggaagtggaggtgccagga
ctcaaagtggtgcacgtgcaatttaattcccccttgcagctctattcccagagaaacatc
ctggatactttacaagggcagatctcttctgttagccctgcttttcccagtttggagcaa
cataaccagccctccaataaccttgtcatagacaaggagtctgaggtttacaagatgctc
caggagactgaagacccaagggaaccacccaggcaatctgcttcattcctggtgctacaa
gaaattttagaatctgaaggtgatcccaataaaccttctggatttagaagtgtgaaacca
ccaatgacaaaagttgcttcatcgatcggaaatgcccagaagctgcccatttgtgataag
tgtggatccggcattgtgggggcgtttgtcaaactgcgtgacaagcaccgccatccagag
tgctacgtgtgcagcgactgtgggacaaacctcaagcagaaaggacacttctttgtggaa
gattgcatctattgtgagacgcatgcccgggagcgagtgacccctcccgaaggctatgag
gtggtcactgtctttccaaagtga
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