KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116832285
Entry
116832285         CDS       T07367                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    116832285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cabi04121]
    116832285
Enzymes [BR:cabi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116832285
Ubiquitin system [BR:cabi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    116832285
SSDB
Motif
Pfam: SPRY zf-RING_UBOX zf-C3HC4_4 zf-B_box zf-C3HC4_2 RING_XB3-XBAT31 zf-C3HC4 zf-RING_2 zf-C3HC4_3 PRY zf-RING_5 zf-ANAPC11 GHL6 Baculo_IE-1 U-box zf-Nse
Other DBs
NCBI-GeneID: 116832285
NCBI-ProteinID: XP_032648860
LinkDB
Position
Unknown
AA seq 562 aa
MSNTNFFFLEDNIVCPICLEVFTDPVTTACGHNFCMDCLQDYWDHQAVIGECPYCPQCRE
SFSSRPRLRKNISLGEIAEKFTREEAQATAKLPLAGPNDIPCDLCSSRKVKSIKSCLQCM
ASLCENHTQLHYEDKTFRNHQLLEPMGDLKSRLCQKHHKLQELYCRTEGGLVCYTCIREE
HKNHDAIPLQEERARKVVEAKRVRANVENQILMLASDSHKHKGRVIYLTKVVKNSRDEVN
QSFAEIIKEIKRMQVKVLEFLDKEERAALVQLGNSIQQKQGKLADFNKQNLWLTDLLDNA
SDQQFLQEFPKLKKLGACTEPVVSLKCEESSSFVNLKQTLGDLKAQLSMVALCFINKILT
KGITMQLYEVIPADMDRKNLLKYYCNLNFDPNTASEELLLFKETHSVLNMGILMESFFGS
CQGFNHWPQVLCTRSLCEGCHYWEVEVSDSWVCLGATYSYMHKTGKSCIFYLIGRNDTSW
CLEWDSLKFSVWHNNIQTVVKGSYYKTIGVFLDYAAGSLTFYGVTNTMNLIYRFLTTFTE
PLYPAVMVSSGGSVTLKQHPLP
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgagcaacacaaatttttttttccttgaggacaacattgtgtgcccgatctgcctggag
gtgttcacagacccagtcaccaccgcctgtgggcacaacttctgcatggactgcttgcag
gattactgggaccaccaagctgtgattggggagtgtccctactgtccacagtgccgagaa
tccttcagctcacggcctcgactccgcaaaaatataagccttggagaaatagcagaaaag
ttcacccgggaggaggctcaggcgacagccaagcttcccctggcaggtccaaatgacatc
ccttgtgatctctgctcctctaggaaagtgaagtccatcaagtcctgcctgcagtgcatg
gcctccttgtgcgaaaaccatacccagttgcactacgaagacaaaactttcaggaaccac
cagctgctggaacctatgggtgacttgaaatccagactatgccagaagcaccacaagctc
caggagctgtactgtaggacggagggtgggttagtttgctacacctgcatccgagaggag
cacaagaaccatgacgcaatcccgctacaggaggagagagccaggaaagtggtggaggcc
aagagagtacgagccaatgtggaaaaccagatcctgatgctggcatcagacagtcacaaa
cacaaagggagggtgatctatctcacgaaagtggtcaagaactcaagagacgaggtgaac
caaagctttgcggagattataaaggagatcaaacgaatgcaggtgaaggtgctggagttt
ttagacaaggaggagagagcagccctcgtccagctggggaattccattcagcaaaagcaa
gggaagcttgctgacttcaacaagcagaacctctggctgacagacctccttgacaatgca
agtgaccaacagttcctgcaggaattcccaaagctcaagaagttgggagcctgcaccgaa
cccgtcgtcagtctgaagtgcgaggagagctcaagttttgtcaaccttaaacagactctg
ggtgacctgaaggctcagctatcaatggttgccctctgcttcatcaataaaatcctcacg
aaaggaataacaatgcaactctatgaggtgataccagcagatatggacaggaagaacctc
ctgaaatactactgcaacctgaacttcgatcccaacaccgccagcgaggagctcttgctg
ttcaaggagacccactccgtgctgaacatgggcatcctgatggagtctttcttcgggtcc
tgccagggattcaaccactggccacaggtcttgtgtacccgcagcttgtgtgagggctgc
cattattgggaagtcgaggtctcagactcatgggtctgcttgggagcaacctacagttac
atgcacaagactgggaagagctgtatcttttacctgattggccggaacgatacctcctgg
tgcctggagtgggactccttgaaattctctgtctggcacaacaacatccaaaccgtggta
aagggcagctattacaagaccattggtgtcttcctggactatgctgctggctccctgact
ttctatggcgtcaccaacaccatgaacctcatctaccgcttcctgaccactttcacggag
ccactatatcctgcagtcatggtgagcagcggcggctccgttaccttgaagcagcatccg
ttaccttga

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