Chelonoidis abingdonii (Abingdon island giant tortoise): 116832285
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Entry
116832285 CDS
T07367
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116832285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116832285
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116832285
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116832285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_2
zf-C3HC4_3
PRY
zf-RING_5
zf-ANAPC11
GHL6
Baculo_IE-1
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
116832285
NCBI-ProteinID:
XP_032648860
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MSNTNFFFLEDNIVCPICLEVFTDPVTTACGHNFCMDCLQDYWDHQAVIGECPYCPQCRE
SFSSRPRLRKNISLGEIAEKFTREEAQATAKLPLAGPNDIPCDLCSSRKVKSIKSCLQCM
ASLCENHTQLHYEDKTFRNHQLLEPMGDLKSRLCQKHHKLQELYCRTEGGLVCYTCIREE
HKNHDAIPLQEERARKVVEAKRVRANVENQILMLASDSHKHKGRVIYLTKVVKNSRDEVN
QSFAEIIKEIKRMQVKVLEFLDKEERAALVQLGNSIQQKQGKLADFNKQNLWLTDLLDNA
SDQQFLQEFPKLKKLGACTEPVVSLKCEESSSFVNLKQTLGDLKAQLSMVALCFINKILT
KGITMQLYEVIPADMDRKNLLKYYCNLNFDPNTASEELLLFKETHSVLNMGILMESFFGS
CQGFNHWPQVLCTRSLCEGCHYWEVEVSDSWVCLGATYSYMHKTGKSCIFYLIGRNDTSW
CLEWDSLKFSVWHNNIQTVVKGSYYKTIGVFLDYAAGSLTFYGVTNTMNLIYRFLTTFTE
PLYPAVMVSSGGSVTLKQHPLP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacaaatttttttttccttgaggacaacattgtgtgcccgatctgcctggag
gtgttcacagacccagtcaccaccgcctgtgggcacaacttctgcatggactgcttgcag
gattactgggaccaccaagctgtgattggggagtgtccctactgtccacagtgccgagaa
tccttcagctcacggcctcgactccgcaaaaatataagccttggagaaatagcagaaaag
ttcacccgggaggaggctcaggcgacagccaagcttcccctggcaggtccaaatgacatc
ccttgtgatctctgctcctctaggaaagtgaagtccatcaagtcctgcctgcagtgcatg
gcctccttgtgcgaaaaccatacccagttgcactacgaagacaaaactttcaggaaccac
cagctgctggaacctatgggtgacttgaaatccagactatgccagaagcaccacaagctc
caggagctgtactgtaggacggagggtgggttagtttgctacacctgcatccgagaggag
cacaagaaccatgacgcaatcccgctacaggaggagagagccaggaaagtggtggaggcc
aagagagtacgagccaatgtggaaaaccagatcctgatgctggcatcagacagtcacaaa
cacaaagggagggtgatctatctcacgaaagtggtcaagaactcaagagacgaggtgaac
caaagctttgcggagattataaaggagatcaaacgaatgcaggtgaaggtgctggagttt
ttagacaaggaggagagagcagccctcgtccagctggggaattccattcagcaaaagcaa
gggaagcttgctgacttcaacaagcagaacctctggctgacagacctccttgacaatgca
agtgaccaacagttcctgcaggaattcccaaagctcaagaagttgggagcctgcaccgaa
cccgtcgtcagtctgaagtgcgaggagagctcaagttttgtcaaccttaaacagactctg
ggtgacctgaaggctcagctatcaatggttgccctctgcttcatcaataaaatcctcacg
aaaggaataacaatgcaactctatgaggtgataccagcagatatggacaggaagaacctc
ctgaaatactactgcaacctgaacttcgatcccaacaccgccagcgaggagctcttgctg
ttcaaggagacccactccgtgctgaacatgggcatcctgatggagtctttcttcgggtcc
tgccagggattcaaccactggccacaggtcttgtgtacccgcagcttgtgtgagggctgc
cattattgggaagtcgaggtctcagactcatgggtctgcttgggagcaacctacagttac
atgcacaagactgggaagagctgtatcttttacctgattggccggaacgatacctcctgg
tgcctggagtgggactccttgaaattctctgtctggcacaacaacatccaaaccgtggta
aagggcagctattacaagaccattggtgtcttcctggactatgctgctggctccctgact
ttctatggcgtcaccaacaccatgaacctcatctaccgcttcctgaccactttcacggag
ccactatatcctgcagtcatggtgagcagcggcggctccgttaccttgaagcagcatccg
ttaccttga
DBGET
integrated database retrieval system