Chelonoidis abingdonii (Abingdon island giant tortoise): 116832414
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Entry
116832414 CDS
T07367
Symbol
MYOF
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116832414 (MYOF)
Membrane trafficking [BR:
cabi04131
]
Endosome - Lysosome transport
Others
Ferlins
116832414 (MYOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
NagJ_C
Motif
Other DBs
NCBI-GeneID:
116832414
NCBI-ProteinID:
XP_032649014
Ensembl:
ENSCABG00000012072
LinkDB
All DBs
Position
Unknown
AA seq
2056 aa
AA seq
DB search
MLRVIVESATNIPKTKFGKPDPIVSVIFKDEKKKTKKIDSELNPVWNEILEFDLKGIALD
VSSSLTIIVKDFETIGQNKLIGNASVALKELVGNQSRSLPFKLISLLNERGENTGATIDV
VVGYEPPANPNDPGGTNAQGTADGEEDGSYEDGADGTVGGIAPAVPGDTKEAQLARRITK
GKKTRRILSNKPQDFQIRVRVIEGRQLSGNNIKPVVKVHVCGQTHRTRIKRGNNPYFDEI
FFYNVRMTPLELLDETISIRVYDSSSLRADSLMGEFKIDIGFVYDEPGHAVMRKWLLLSD
PEDTNSGAKGYLKVSMFVLGAGDEPPMEKRERDNENDDVESNLLLPAGIALRWVTFLLKI
YRAEDIPQMDDAFAQTVKEIFGGDADKKNLVDPFVEVCFAGKKVCTNIIEKNANPEWNQV
VNLQIKFPSMCEKIRLTVFDWDRLTKNDAVGATYLSLSKIASSGGEVEEFSSSGTGASSY
EANTGETEVGFLPTFGPCYLNLYGSPREYTGFPDPYDELNSGKDEGVAYRGRILVELSTI
LDSKSVNKKIEAISSDDILVVEKYQRRRKFSLSAVFHSATMLQDIGEAIQFEVSIGNYGN
KFDTTCKPLASTTQYSRVVFDGNYYYYLPWVNRKPVVTLTSYWEDISHRLDPVNLILTMA
ERLQSNIAALKSGIQAKVTENQLQKIQQKLIDELIEDTSKPFPLLEAKSNVTVLDTQIQN
LRRRSLKHILEAATRMRNDATDVKATLAEIEDWLDKLMQLTEEPQNSIPDVIIWMIRGEK
RLAYARIPAHQVLYSTTSTEASGKYCGKTQTIFLKYPQDKNKGAKIPVQLRVNIWLGLTK
DDKKFKSFAEGTFSVFAEMYENQALMFGKWGTSGLVGRHKFSDVTGKIKLKREFFLPPKG
WEWEGEWMVDPERSLLTEADAGHSEFTDEVYQNESRYPAGEWKAAEEPYTDVNGEKTAPS
GEITCPPGWIWEDDAWIYDINRAVDEKGWEYGITIPPDNKPKSWVAAEKMYHTHRRRRLV
RKRKKDPSQATGVKVMASYEDQEGWEYASLIGWKFHWKQCSSDTFRRRRWRRKMAPSDTH
GAAAIFKLEGALGADTSLDDEEGKSSEKAKESATRVFGANTPIVSCSFDRVYSYHLRCYI
YQARNLIALDKDSFSDPYAHVSFLHQSKTTEIIPTTLNPMWDQTLIFNEIEIYGDPQTVM
QNPPNVVIELFDNDQVGKDEFLGRSVCSPMVKLTPGVDDTPKLLWYPVMNGGKACGSILL
AAELILRDKDGSNLPILPSQKAPKLYMVPQGIRPVVQLTAIEILAWGLRNMKNYQMASVT
SPSLVVECGRKMVESVVIKNLKKTPNFPCSVLFMEVLLPKEELYAPSLVIKVIDHRQFGR
KPVVGQCTIESLEDFRCDPYATTEDIAPQLKVSLLSAVPRRDVVIEVEDTKPLLAAQLTE
KEEEIVDWWSKFYASVGEHEKCGQYIQKGYDTLKVYDCELEEVPEFKHLTDFCDTFKLYR
GKSEDNDDPSVVGEFKGSFRIYPLSDDPAVPVPPRQFRELPESGPQECIVRIYIIRALDL
QPQDNNGLCDPYIKITLNKKVIEDRDHYVPNTLNPDFGRMYELSCFLPQEKDLKIAVYDY
DMLTRDEKVGETIIDLENRFLSRFGAHCGIPQQYCISGVNTWRDQLKPTHMLQNIARFKG
YSPPILSENGSRINYGGRDYTLEEFETNKKLHQHLGPGEERLALHILRTQGLVPEHVETR
TLYSTFQPNISQGKLQMWVDVFPKSLGPPGPPFNINPRKAKKYIMRVIIWNTKDVILDEK
SITGEEMSDIYVKGWMPGNEENKQKTDVHYRSLDGEGNFNWRFLFPFEYFPAEQLCMVSK
KEHFWSLDKTEFRIPPKLIIQIWDNDKFSLDDYLGFVELDLHNTVIPAKAPEKCNIDMIP
EYKANNPLKAPKTVSLFEQKSMKGWWPCYTEKDGSRVLAGKVEMTLEVLNEKEAEERPAG
KGRDEPNMNPKLDLPNRPETSFLWFTNPCKTMKFIVWRRFKWIFIGIIILLIVLLFLAIL
LYSLPNYISMKIVNPI
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgggtgattgtggaatctgctaccaatatccctaaaactaaatttggaaaaccg
gatcctattgtttctgttatttttaaagatgaaaaaaagaaaacaaagaaaattgatagt
gaactcaaccctgtttggaacgagattcttgaatttgatttgaaagggatagcactcgat
gtttcatcatccctgaccattattgtgaaagattttgaaacaataggacaaaacaaatta
attggaaatgcatcagtagcacttaaggaacttgtaggcaaccagagtagatctcttccc
ttcaagcttatttccctgctaaatgaaaggggagagaacacgggcgcaacaattgatgta
gtggtaggatatgagccaccagcaaatccaaatgatccaggggggaccaatgcacaaggc
actgcagatggagaagaagatggaagttatgaggatggggctgatggtacagttggtggc
attgcaccagcagttccaggtgacacaaaggaagcccagcttgctcggcgtatcactaaa
ggaaagaaaacacggagaatcctttctaacaaaccccaagacttccagattcgtgttagg
gtcattgaaggtcgtcagttgtctggaaataacataaaaccagtagtcaaagttcatgtt
tgtgggcagacacaccgaacaagaatcaaaagaggaaacaatccatattttgatgagata
ttcttctacaatgtccgcatgacccctttagagctgcttgatgaaacaataagcattcgg
gtgtatgattcttcttctttacgagcagactctctgatgggagaatttaagattgacatt
ggctttgtttatgatgaacctggccatgcagtcatgagaaaatggcttcttttgagtgac
cccgaagacacaaattcaggagctaaaggctatctgaaagtcagcatgttcgtcctgggg
gcaggagatgagccaccaatggaaaaaagagaacgagataatgaaaatgatgatgtggag
agtaatcttttactgccggctggaattgcacttcgatgggtcacttttcttcttaaaatc
tacagagccgaggatattccccagatggatgatgcttttgcgcagactgttaaggaaata
tttggaggtgatgcagacaagaaaaacctagtagatccatttgtggaagtttgttttgct
ggaaaaaaggtttgcacaaatataattgagaaaaatgctaatcccgaatggaatcaagtt
gttaatcttcaaatcaagtttccctcaatgtgtgaaaaaataagattaacagtttttgac
tgggatcgtcttacaaaaaatgatgcagtaggagcaacgtatttaagtctctccaaaatt
gcttcttctggtggagaagtagaagaattttcatcttcgggaactggggcttcatcatat
gaagcgaacacaggggaaacagaggtgggctttttaccaacatttgggccctgttaccta
aacctttatggaagcccaagagaatacactggattcccagacccctatgatgaactaaac
tctggaaaggatgaaggagttgcttacagaggcagaatcctagttgaactatctacaata
cttgacagtaaatctgtgaataaaaagatagaggcgatctccagtgatgacatattggtt
gttgagaaatatcagcgcagacgaaagttcagcctttcagctgtgtttcattctgctacc
atgctgcaagatattggtgaggctatccagtttgaggttagcattggtaattatgggaac
aagtttgacactacctgtaagcctttggcatcaacaactcaatacagccgtgttgtattt
gatggtaactactattattacctgccatgggtaaacagaaagccagtagttacactgact
tcctattgggaggacataagtcatcgactagacccggtgaacctaatcctaaccatggct
gaaagactgcaatccaacatagctgccctaaagtcaggaatacaggctaaagttactgaa
aaccagttgcaaaagatacagcagaagctgatcgatgaacttatagaagatacaagtaag
ccgtttcctctcttagaagccaaatccaatgtcacagtccttgacacacagatacaaaac
ctgcgccgcaggtctctcaaacacattctagaggcagcaacaaggatgagaaatgacgct
accgatgtgaaggcaactttggcagaaatcgaagactggttggataaattaatgcaattg
accgaagagccacaaaacagtattcctgatgtgatcatctggatgatccggggagagaag
agactagcttatgcccgcattcccgcacaccaggttttgtattctactacaagtactgaa
gcatctggtaaatactgtggaaagacccagaccatctttctaaagtacccacaggacaag
aacaaaggtgccaaaattccagtgcagctgcgagttaacatttggcttgggttgactaaa
gatgataagaagtttaaaagctttgcagaaggaacattcagtgtttttgcagaaatgtat
gaaaatcaggctcttatgtttggaaagtggggcacctcaggactagtcggtcgccacaag
ttttctgatgtcacaggaaaaattaaattgaaaagagaattctttttgcccccaaagggc
tgggagtgggaaggagaatggatggttgatcctgaaagaagtttgctgactgaagctgat
gcgggtcatagtgagtttacagatgaagtgtaccaaaatgagagtcgttatcctgcagga
gaatggaaagcagctgaggagccctacacagatgtgaatggagaaaaaactgcaccatct
ggtgagattacctgtccccctggttggatctgggaggatgatgcttggatatatgatata
aatcgagcggtggatgagaaaggatgggaatatggaattaccattcctccagacaataag
ccaaagtcctgggttgctgcagagaaaatgtatcatacacacagacggcgaagactggtg
cgaaaacgcaaaaaggatcccagccaagcaacaggagtaaaggtaatggcatcctatgaa
gatcaagaaggatgggaatatgcatctttgattggctggaagtttcactggaaacaatgc
agttctgatacattccgccgtagacgctggaggagaaaaatggctccttcagacacacat
ggtgcagcagctatctttaaacttgaaggtgctcttggagcagacactagccttgatgat
gaagaggggaagagttccgaaaaagccaaggaatctgccacacgtgtatttggtgccaac
actccaattgtttcctgcagttttgacagagtgtatagttaccaccttcgctgctacatc
tatcaggcaagaaatcttattgctttagacaaagacagcttttcagatccatatgctcat
gtttcattcctccatcaaagcaaaacaactgagatcatccctacaactctgaatcctatg
tgggaccaaacgctcatatttaatgaaattgaaatctatggagacccacagacagtaatg
caaaatccacctaatgtggttattgaactttttgacaatgaccaagtgggcaaagatgag
tttctaggaagaagtgtttgctctcctatggtaaagctaaccccaggagtggatgacaca
cctaagcttctctggtatcctgtaatgaatggaggaaaagcttgtgggagcatcctttta
gctgcagagcttattctgagggacaaggatggctccaaccttccaattcttccatcacaa
aaagcaccaaagctttacatggtacctcaaggaattagacctgttgttcagctcactgct
attgagattcttgcctgggggttacggaacatgaaaaactaccaaatggcttctgttact
tctccaagtctcgttgtagagtgcggtcgtaaaatggtggagtctgtagtgatcaaaaac
ctcaaaaagacaccaaattttccatgttctgttctcttcatggaagtgcttttgcccaaa
gaggagctatacgctccatcactagttattaaagtgatagaccacagacagttcggacgg
aaaccagttgtgggacagtgtaccattgagtccctagaagactttcgctgtgacccctac
gctactacagaagacattgcaccacaactaaaagttagcctcctgtctgctgtgcctcgt
cgggatgtggtcattgaagtggaagacacaaagccactactagcagctcagcttacagaa
aaggaagaagagattgttgattggtggagcaaattttacgcttcagtgggagagcatgaa
aaatgtggacaatatattcaaaaaggatatgacactttaaaggtgtatgattgtgaacta
gaggaggtacctgaatttaagcacttgacagatttctgtgatacatttaagctgtacaga
ggcaaatcggaggacaatgatgacccttcagtggtaggagaatttaagggctcctttaga
atctatccattatcagatgatcccgctgtaccagttcctcctcgtcaattccgtgagtta
ccagagagtggacctcaggagtgcattgtgcgaatttatataattagagccttagatctc
caaccccaggataacaatgggctgtgtgatccttatataaaaataaccttaaataaaaaa
gtaattgaagacagagatcattatgttcccaatactctcaacccagattttggcagaatg
tatgaactcagctgcttcttgcctcaagagaaggatctgaaaattgcagtctatgattat
gatatgctgactcgtgatgaaaaagttggtgaaaccatcattgatcttgagaacaggttc
ctttctcgctttggagctcattgtggcataccacagcagtattgcatttcaggtgtaaat
acctggcgagatcaactgaagccaacacacatgttgcaaaatatagccaggtttaaaggc
tactctcctcctatcctctcagaaaatggaagcaggattaactatggaggacgagactac
accttggaggaatttgagactaacaaaaaattgcatcagcaccttggaccgggtgaagag
cgtctagcccttcatatccttagaacccaaggcttggtccctgaacatgtggagacaagg
accttatacagcaccttccagcccaacatctcacaaggaaagcttcagatgtgggtggat
gttttccccaaaagcttgggacctcctggccctcccttcaacatcaatccccgcaaagcc
aagaagtacatcatgcgggtgattatttggaacacaaaggatgtcattctggatgaaaaa
agtatcacaggggaagaaatgagtgacatctatgtgaaaggctggatgcctggcaatgaa
gaaaataagcagaaaacagatgtgcactataggtcactggatggtgaagggaattttaac
tggagatttcttttcccttttgaatactttccagctgagcaactctgtatggtttctaaa
aaggagcatttttggagtctcgacaaaacagaattcagaatcccacccaaactgatcatt
cagatatgggataatgacaagttctccttggatgactacctgggttttgttgaacttgat
ttacacaacacagttattccagcaaaagctcctgaaaaatgcaatatagacatgattcca
gaatacaaggcaaacaaccctctcaaggctcccaagactgtctcactcttcgaacagaaa
tccatgaaggggtggtggccatgttacacagaaaaggacggctcacgtgttttggctggt
aaagttgagatgactctggaagtcctcaatgaaaaagaggctgaggaaaggccagctggt
aaaggaagagatgaacccaacatgaaccccaagttagacctaccaaaccgaccagaaact
tccttcctttggtttacaaatccatgcaagacaatgaaatttattgtgtggcgcagattt
aaatggatcttcataggcattatcatcctactgattgtattgttgtttctggcgatactc
ttatattcactgccgaattatatatcaatgaagattgtgaacccaatctaa
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