Chelonoidis abingdonii (Abingdon island giant tortoise): 116832722
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Entry
116832722 CDS
T07367
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116832722 (DENND4B)
Membrane trafficking [BR:
cabi04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116832722 (DENND4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
DUF2464
SPA
PPR
Motif
Other DBs
NCBI-GeneID:
116832722
NCBI-ProteinID:
XP_032649535
Ensembl:
ENSCABG00000002985
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MAEEKLPQLVDYFVVAGLTDSSRALEEESQQPRPARPSEPITDVAVVIRSQGEEVPQGFT
CIESSTAGHPVDLNASLLNSPQMYLCYKRGRGKPPLIELGVHCEGKDRLKPGYEMVRTTP
YSRSANLSSGAAGHQRTFLTYRRAAESQGHNTLGITDICLVVPSKGENTPHTFCRVERNL
NAGMWGPAVFLCYKMAMSKANTLVYEAGLLSRYPEQDSESFPLPDSVPVFCLPMGATIES
WPVNTKYQLPVFSTFVLTGASGDKVYGAAIQFHEPYPRERLSEKQSLRLGLLSVVDRRPI
GSKSVQTRRSICVLSHWPLFDVFRKFLMFIYRYSISGPHVLPLETHISHFMHNVPFPSPQ
RPRILVQMSPYDNLLLCQPVSSPLPLSGASFLTLLQNLGPENTVMLLLAVLTEQKLLIHS
LRPDVLTSVSEALVSMIFPLRWQCPYIPLCPLTLADVLCAPVPFIVGIHSSYFDLHDPPR
DVICVDLDTNTIFLSEERKLLSPRALPRRPCKVLQASLLTHFQQLDEMYNKPVEEASLEF
LLTDYDLVYGRRKQLELEIQASFLRFMACVLKGYRSFLLPITRAPCDTTHDSSSLFSLQG
FLKSRDRAYHKFYGQLLRTQLFTQFIHECSFVSDRHACLEFFDTCVDKVQVDLEKAEDMP
LIELDDSHGSEHTVFIMPPEEPLGPDGTELPALYCYDSFPVLRAELFERPQDQLAALLCQ
PKSSTPTSPAPRRTKQEMKVAQRVAQKYSSVPDMWARCLLGHCYGLWFIYLPTYVRAAPS
KVRALQTAYEVLKQMESRKVVLPDEVCYRSLMQLCGQYGEPVLSVRVLLEMKRAGIVPNT
VTYGYYNKAVLESKWPSGTQGGRLRWAKLRNVVLGTAQFRQPLRQRQLESEARGGALPVI
KALGVLEPGSDSLVALPPGLRQLLDGPGSSEDGSLSDVSFQTDESDRPTLDSAEVQMSLG
PGTRGTKPGQRDENHNSLGGTPRRGLAAKLQQLLSPAKRPSLRHTASVERSSAQQDASSL
RRASEQTETLPRKSPLESLLHPHERPDSTASESSVSLGSEFDLSDTSLGSFSLRKSSDPL
PEAVAGPELPPVEVSPPTP
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagaagctgccgcagctcgtcgactacttcgtggtggccggcttgaccgac
tcctccagggccttggaagaggagagccagcagccccggccggcccggcccagcgagccc
atcaccgacgtggccgtggtcatccgctcgcagggcgaggaggtgccccagggcttcacc
tgcatcgagagcagcacggccggccaccccgtggacctgaatgccagcctcctcaacagc
ccccagatgtacctctgctacaagcggggccgtggcaagccgcccctcatcgaactgggg
gtgcactgtgaggggaaggaccgcctgaagccgggctacgagatggtccgcacgacgccc
tacagccgctctgccaacctgagctcgggcgccgccggacaccagcgcaccttcctcacc
taccgccgggccgctgagtcccagggccacaacaccctgggcatcaccgacatctgcctg
gtcgtgcccagcaagggggagaacacacctcacaccttctgccgggtggagaggaacctc
aacgccggcatgtggggcccggctgtgttcctgtgctacaagatggccatgtccaaagcc
aacaccctggtctacgaagcaggtctcttgagccgctatcctgagcaggacagtgagtca
ttcccgctgcctgactcggtgcctgtcttctgcctgcccatgggggccaccatcgagagc
tggcccgtcaacaccaagtaccagctgcccgtcttctccaccttcgtgctgacgggggct
tcgggggacaaggtgtacggcgctgccatccagttccatgagccctacccgcgggagcgg
ctgtcagagaagcagagcctgcggctgggcctgctcagcgtggtcgaccgacgccccatc
ggcagcaagtcggtgcagactcgccgcagcatctgcgtcctgtcgcactggcccctcttc
gacgtcttccgcaagttcctcatgttcatctatcgctactccatctcggggccccacgtg
ctgcccctggagacgcacatctcccacttcatgcacaacgtccccttcccgtctccacag
cgcccgcgcatcctggtgcagatgtctccctacgataacctgctgctgtgccagcctgtg
tcctccccgctgccactcagcggagccagcttcctgaccctgctgcagaacctgggccct
gagaacaccgtgatgctgctgctggccgtgctgactgagcagaagctgctgatccactcg
ctgcgccctgacgtgctgaccagcgtgagcgaggcgctcgtctccatgatcttcccacta
cgctggcagtgcccctacatcccgctatgcccgctgacactggcagacgtgctgtgcgcc
ccagtgcccttcatcgtcggcatccactccagctacttcgacctgcacgacccgccccgt
gacgtcatttgtgtcgacctcgacaccaacacgatcttcctgagcgaggagaggaagctg
ctgtcgccccgcgcgctgccccgccggccctgcaaggtgctgcaggcttcactgctcacc
cacttccagcagctggatgagatgtacaacaagccagtggaggaggcatcgctagagttc
ctgctcaccgactatgacctggtgtacgggcggcgcaagcagctggagctggagatccag
gcctccttcctgcggttcatggcctgcgtgctgaagggataccgctccttcctgctgccc
atcacccgggcgccctgcgacaccacccacgactccagcagcctcttctccctgcagggt
ttcctcaagtcccgggaccgcgcctaccacaagttctacgggcagctgctgcgcacgcag
ctcttcacgcagttcatccatgagtgctccttcgtcagcgaccggcacgcctgcctggag
ttcttcgacacctgtgtcgacaaggtgcaggtggatctggagaaggctgaggacatgccc
ctgatagagctggacgactcacacggcagtgagcacacggtcttcatcatgccccctgag
gagcccctgggccccgatggcactgagctgcccgcgctgtactgctacgacagctttcct
gtgctgcgggccgagctcttcgagcgcccccaggaccagttggcggctctcctgtgccag
cccaagagcagcaccccaaccagccctgcaccacgcaggaccaagcaggagatgaaggtg
gcgcagcgggtggcacagaagtactcgtccgtgcccgacatgtgggcccggtgcctgctg
ggacactgctacgggctgtggttcatctacttgcccacctacgtgcgggccgccccttcc
aaggtgcgggcgctgcagacggcctacgaggtgctgaagcagatggagagcaggaaggtg
gtactgccggacgaggtctgctaccgcagcctcatgcagctgtgcgggcagtatggtgag
ccagtgctctccgtccgcgtcctgctggagatgaaacgggccggcatcgtgcccaacacc
gtcacctacggctactacaacaaggctgtgctggagagcaagtggccctcgggcacccag
ggcgggcggctgcgctgggccaagctgcgcaatgtggtgctgggcactgcccagttccgg
caacccctgcggcagcggcagctggagagcgaggcccggggcggcgccttgccagtgatc
aaggccctgggggtgctggagcctggcagcgactcgttagtcgccctcccccccggcctg
cgccagcttctggatgggcccggcagctcggaggacgggagcctgtcagacgtcagcttc
cagacggacgagagcgaccggccgaccctggacagcgccgaggtgcagatgagcctgggg
ccgggcacccggggcaccaagccaggccagcgcgacgagaaccacaacagcctggggggg
acgccacgccgggggctggctgccaagctgcagcagctgctgtccccagccaagcgcccc
tccctgcgccacaccgccagcgtggagcgatccagcgcccagcaggacgccagctccctg
cgccgggcctcagagcagacagagaccctgccgcgcaagagccccttggagagcctgctg
cacccccatgagcgccccgactccactgcctcagagagctccgtctccctgggcagcgag
tttgacctgtcggacacgtcactcggcagctttagcctgcgcaagtcgtcggacccactg
cctgaggctgtggctgggccggagctgccccccgtggaggtgagcccccccactccctga
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