Chelonoidis abingdonii (Abingdon island giant tortoise): 116833214
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Entry
116833214 CDS
T07367
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116833214 (SHPRH)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116833214 (SHPRH)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116833214 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
PEP-utilisers_N
HEAT_IPO9_c
Motif
Other DBs
NCBI-GeneID:
116833214
NCBI-ProteinID:
XP_032650460
Ensembl:
ENSCABG00000019517
LinkDB
All DBs
Position
Unknown
AA seq
1767 aa
AA seq
DB search
MSVTLVLPKFHQLLKCSILERLGHCPQNSKMSNRRKRAPPLRMDEEKKKQLCWNMHEDRR
NEVILLDDNMDEDHPVPGPSTSSVSFVVDDDSIDEGLAYRENRGSKSVGFSTDDGEDSCS
ILTSISVQLNIVVSPYHSDNFWKALLGEFVLQLLPQKILIEKIHKRSFTLMRADSGDQLQ
ICVHARSGEEGGEEEKESFGDYEEGILVESSLNSEILEDLRWLQKKKVIGLYQRPREDQA
LKVGIYLLEAGLSKSEFLSDGGGRIKKANQLIQKLMEKYYNFIIPVWLIMRPLNFSGFIL
NLQLLHCAWQSYEHQQRHWKSLSADLGEKRLINVLEEDEEESDRELERQNIEELYDFVRH
THQQEIQFLREDVQHSALIPVLRPYQSEAVNWMLQRENFRNNPTNENTLHFLWREVITPD
GVKLYYNPFTGCIIREHPVAGPPWPGGILADEMGLGKTVEVLALILTHTRRDVKQDVLTL
PEGKLVNFFIPPQPTEGNKKKKTKKVELKSKEKVQYPSLRVMILAAVKEMNVKKGASITA
IFKYVSAIYRYDIQRNRRLLKRTLEKLIAEQVVEQVKGHGLAGSFKLGKNYKEQMRHERT
KKQTTRSPGRIQKTSLPNAKTQTKESASRVTSSEKVKPLRLVDIPAEEHDYCTASKNNKK
SETGQKTCIKEENLQPRVIDLESADLQGNLMSSDSTSPVLSACKNTDDMEVLKDQSSDSQ
ERAGSVIQHASSIFPFNTSDYRFECICGELGLVDYKARVQCLKCHLWQHAECVNYKEENL
KIKPFYCPHCLVAMKPVSTGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGF
LQPHMLAEQEVVITTYDVLRTELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRI
CLDEAQMVECTTAKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWW
DQLLYRPYCRKNPQPLYNLIANIMWRSAKKDVIDQIQIPPQTEDVHWLHFSPVERHFYHR
QHEVCCQDALAKLRKISDWTLKLSSLDRRTVTTILYPLLRLRQACCHPQAVRGEFLPLQK
STMTMEELLTSLQKKCRTECEEAHRQLVCALNGLAGIHIIKDEYALAADLYREVLRSSEE
HKEKLKTDSLQRLHSTHNLMELLAAKHPGIPPTLRDGRLEEEAEQLRQHYMSKSNAEVSE
AHQALQPVLQTIRELQRKIHSGSPWWLDVIQTAIQYAIDEELVQRVQNEITSNYKQQTNK
LSMADKFRDCRGLQYLLTTQMEEVKKFQKLVKEAVKNLEGPPSKKVIEAATICHLRPVRL
PLNNCVFCKADELFTEYESKLFSHTVNGQMAIFEEMIEDEDGLVDDRLPTTSRGLWATSE
TERSLKAILSFAKAHRMDVRLIEEGNTFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELA
MATERLRVRHPDEPKPSPPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNL
EKSQDKTTGGVNPEPCPICARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGTRRSSIKCA
ICRQTTSHKEISYVFTAETANQEDDIPVKGSHSTKVEAVVRTLKKIQFKDPGAKSLVFST
WQDVLDIISKALYDNNMVFAQINGISKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEA
THVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQMMLKTVERSHTSS
SMKQSEASVLTVADLADLFTEETEELE
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaccttggtgctgcccaaatttcatcagcttctaaaatgcagtattttggag
agattgggacactgcccgcaaaatagcaagatgagtaatcgtcgaaagcgtgcgcctcca
ctgaggatggatgaggagaaaaagaagcaactctgctggaatatgcatgaagaccgaagg
aatgaggtaatactattggatgataacatggatgaagaccaccctgttccaggtccaagc
acctcttctgtatcctttgttgtagatgatgatagcattgatgaaggactggcttacaga
gaaaacagagggtcaaagtcagtgggtttctcaacagatgacggagaagactcctgctcc
atcttgacctctatatctgtacagctaaatattgttgtctcgccttaccattcagacaat
ttctggaaagctttacttggagaatttgttcttcagcttcttcctcagaaaattcttatt
gagaagatccataaaaggagttttactttgatgagagcagattctggtgatcagctgcaa
atctgtgttcatgcaagaagtggagaagagggaggtgaggaggaaaaagaaagctttggt
gattatgaagagggcatattggtggaatcatccctcaatagtgaaatattagaagacttg
agatggttgcaaaagaagaaggtaattggactttatcaaagacctagagaagatcaagca
ttaaaggttggaatttaccttctggaagctggtttaagcaaatcagaatttctcagtgat
ggaggtgggagaataaaaaaggccaaccagctgattcagaaactaatggaaaagtactac
aactttataattccagtatggctgatcatgagaccattgaacttttctggattcattctg
aatctccagttgttacattgtgcttggcaaagctatgaacatcagcagaggcattggaaa
tctctgtctgcagacttgggagaaaagcgtttaataaatgtgttggaggaggatgaggaa
gaatctgacagagagctggaacgacagaatattgaagagctatatgactttgtgaggcac
acacatcagcaggaaatccagtttttgagggaggacgtacagcactctgcattgattcca
gtactaaggccataccaaagtgaggctgtgaactggatgttgcaacgggagaatttcaga
aacaaccctaccaatgaaaacacactacactttctatggcgagaggtcatcactccagat
ggagtaaaactctactataatccatttactggctgtattatccgtgaacacccagttgca
gggcctccatggcctggaggaatcctggcagatgagatgggtcttggaaagacagtagag
gtactggctcttattctgacacacacccgacgagatgttaaacaagatgttctgacacta
cctgagggtaaattggtgaacttcttcattccaccccagcctactgaaggaaataaaaag
aaaaaaacaaagaaagtggagcttaagtcaaaggagaaagtacagtatcccagcttacgg
gtgatgatattagcagctgtcaaggaaatgaatgtgaagaagggagcttccatcactgca
atatttaagtatgtcagtgccatatatagatatgacatacagagaaaccggcgtcttctc
aaaagaactttggaaaaactaattgcagagcaagtagtagaacaggttaaaggtcatggt
ctggctggatctttcaagttggggaagaattacaaagaacaaatgaggcatgagagaacc
aaaaaacagacaacaaggagtcctggaaggattcagaagacatctttgcctaatgctaaa
actcaaaccaaagaatcagcaagtagggtcacatcttcagaaaaagtcaaaccactccgg
ctggtggacattcctgcagaagagcatgactactgtacagctagcaaaaataacaaaaag
tctgagacaggccaaaagacttgcataaaagaagaaaatcttcagccaagagttatagac
ttggagtctgctgatttgcaaggcaacctgatgtccagtgattccaccagtcctgtcctc
agtgcatgtaaaaatacagatgacatggaagtcctaaaggaccagtcctcagactcccaa
gaacgtgctggcagtgtcatacagcatgccagttccatttttccattcaacacctctgac
tatcgttttgaatgcatttgtggtgagcttggcttggttgactataaggcccgtgtgcag
tgcctgaagtgccacctatggcagcatgctgaatgtgtaaactacaaagaggaaaacttg
aagattaagcccttttattgtccccattgcctagtagcaatgaaaccagtttctacagga
gccactctgataatctctccaagttccatctgtcatcagtgggtggatgagatcaacagg
catgtgagatcatcttcccttcgagtcctggtgtatcaaggtgtgaagaaacatggcttc
ttgcagcctcacatgttagcagagcaggaggtagtcatcaccacttatgatgtccttcgc
actgagctgaactacgtggacatccctcatagtaacagtgaagatgggcggcgtttcagg
aaccagaagcggtatatggccatcccaagtcccttagtagcagtagagtggtggaggatc
tgcctagatgaagcacagatggttgaatgcaccactgcaaaggctgcagaaatggcactc
cgtttgagtggaatcaatcgctggtgtgtcagtggcactcctgtacagcgaggattagaa
gatctatatggcttagtgctttttcttggagttgatccttactgggtcaaacattggtgg
gatcagcttctgtatcgaccttactgtaggaaaaatcctcagcctctctacaacctaatt
gcaaacataatgtggagatcagcaaagaaggacgtgattgatcaaattcagattcctcct
cagacagaagatgtacactggcttcacttttctcctgtggagagacacttttatcatcgt
cagcatgaagtgtgctgccaagatgcactagcaaaactcaggaagatttctgattggact
cttaaacttagcagcttggacaggaggacagtcactactattctgtaccctttgctgcgt
ctgaggcaggcctgctgtcatccacaagctgttcgtggggaattcttgccgttgcagaaa
agcaccatgaccatggaggagcttctaacttcactgcagaagaaatgtcgaactgaatgt
gaggaagctcatcggcagcttgtgtgtgctctcaatggtttagctggtatccatatcatt
aaagatgaatatgcattggcagcagacctgtacagagaggtgttgcgttcctctgaagag
cacaaagaaaagctcaaaacagattcgttgcaaagacttcattctacgcacaacctgatg
gaactactggcagcaaagcatccagggataccaccaaccttgcgtgatggcagacttgag
gaagaggctgaacaacttcgacaacattatatgagtaaatccaatgcagaagtttcagaa
gctcatcaggccttgcagccagtgctacaaaccattcgtgagctccagagaaagatacat
tctgggtcgccttggtggttggacgtgatccagacagcaatacaatatgccattgatgag
gagcttgttcagcgtgtgcagaatgagataaccagtaactacaaacagcaaactaataaa
ctctccatggcagacaagttccgtgactgtagaggccttcagtatctgctcacaacccaa
atggaagaggtgaagaagttccagaagcttgtaaaagaagctgtgaaaaatctagaaggt
cctccctctaagaaggttattgaagctgccactatctgccatctgcgacccgttagactt
cctttgaacaattgtgtcttctgtaaggctgatgagctgttcacagaatatgagtcaaag
ctgttctctcatactgtgaatggccagatggctatcttcgaagagatgatagaagatgaa
gatgggctggttgatgaccgtttgcccaccacaagtcgaggactatgggccacaagtgag
acagagcgctccctaaaagccatactgtcttttgccaaagctcaccgaatggatgttaga
ctaattgaagaagggaatacatttctggaactctttgaagcatggaagaaggagtacaag
ttacttcatgaatattggatggtactgagggatcatgtgtctgctattgatgaacttgct
atggctacagaacggctccgagtgcgtcatcctgatgagccaaagcctagcccccctgtt
cttcacatcatagaaccacatgaggtagaacaaaatcgagtgaaacttttgaatgacaag
gcagttgccaaatcacagcttcagaagaaactaggccagctcctatatcttactaatttg
gagaagtctcaggataaaaccactggaggagttaatccagaaccttgcccaatttgtgcc
cgccaactgggaaaacagtgggcagttctgacatgtggacattgcttctgtaatgagtgc
atagctattattatagagcaatacagtgttggcacccgcagaagttcgattaaatgtgcc
atctgcaggcagacaacttctcataaagaaatatcctacgtcttcactgcagagactgca
aaccaggaggatgatattcctgtgaagggaagtcactccaccaaagtggaagctgtggtt
cggactctgaagaagatccagtttaaagatccaggggctaaatctttagttttctcaacg
tggcaagatgttttggacataatttcaaaagctctatatgataacaacatggtgtttgct
cagattaatggaattagtaaatttcaggagaacctctcggcatttaaatatgatcccaag
atcaatattttgttgctaccccttcatactggttccaatggattaaacataattgaggca
actcatgttctgctagtggagcccattttgaatcctgcacatgaacttcaggccattggc
agagtgcatcgtattgggcaaacaaagcccaccattgttcacaggttcctgataaaagca
acaatagaagaaagaatgcagatgatgctgaaaactgtagagagaagccacaccagctct
tccatgaaacagtcagaagcctcagtgttgacagtggctgatctggcagaccttttcaca
gaagaaactgaagaacttgagtga
DBGET
integrated database retrieval system
