Chelonoidis abingdonii (Abingdon island giant tortoise): 116833245
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Entry
116833245 CDS
T07367
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116833245 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cabi01007
]
116833245 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cabi03016
]
116833245 (GARS1)
03029 Mitochondrial biogenesis [BR:
cabi03029
]
116833245 (GARS1)
Enzymes [BR:
cabi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
116833245 (GARS1)
Amino acid related enzymes [BR:
cabi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
116833245 (GARS1)
Transfer RNA biogenesis [BR:
cabi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116833245 (GARS1)
Mitochondrial biogenesis [BR:
cabi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
116833245 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
Motif
Other DBs
NCBI-GeneID:
116833245
NCBI-ProteinID:
XP_032650536
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MAGVAQRTASGVERLMVKAAAEAHGEAVQSALDHGTTPQASVPAGTDTHAGSRQGHSHQA
SVRRAQTPQARIRESTDTPRLGSRGEHRHPQARSRRGTDTHARYPERHRHPRLGPGGTDT
HARSRQAQHPGSDPGGHGDPQARIPGEAQTPQARFSAAQTPGSVPAGTEPPGSDPGERHR
HPSRIRGTATPGSDPGGHGDPQARSRERPEPGSDTRQGSSHPSSDPGGHRHPRLGSREKQ
HRPQAGSRQAHTTQARSRRGTDTQARSGEGTDTPGSNPGGTEDPQARIREGSTDSPQSSG
SRQGTATPGWSRRGTDTPASDRGHRPQAPPLGSPRRGTAPHARIPAATSTANARAGPGAP
PAGASERLPRVGMPRARVRPSAHSSPARSCSIAPLAHAAAPGHAACPAAATRGPARPRRQ
TRGALIAQAGGVRSPASRGAASRRESCRAARYFCGSLILSISADAHFPISKCSPTSSILA
SFHGVVETLRQPLLQNVPHLCLSEWNPYLRLSCVLPQGELVRKLKEEKAPQMDVDRAVAE
LKARKRILEAKELALQPKDDIVDRMKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCAL
KNNIIQAWRLHFIQEDQILEIDCTMLTPEPILKTSGHVEKFADFMVKDVKNGECFRADHL
LKAHLQKLMSDKKCTAEKKTEMENVLTQLDNYSQQELADLFVNYNVKSPVTGNDLSPPVS
FNLMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPR
SGLIRVREFTMAEIEHFVDPSEKYHPKFQSVADLHILLYSSKAQVSGQSAHMMRLGDAVE
QGVINNSVLGYFIGRIYLYLIKVGVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIE
IVGCADRACYDLSCHARATKVPLVAEKPLKEPKTASVVQFEANKGAIGKAYKKDAKLVLE
YLSICDECYISEMEKLLNEKGEFTVETEGKTFQLTKDMVSVKRFQKTLHVEEIVPNVIEP
SFGIGRIMYTVFEHTFRVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEA
LTRNGVSHKVDDSSGSIGRRYARTDEIGVAFGITIDFDTVNKVPHTATLRDRDSMRQIRA
EVSELPTIIRDLANGCLTWADVEVKYPLFEGQETGKKETIEEDNYLK
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtggctcaaaggacggctagtggagtggagcggctcatggtgaaggctgca
gcagaagcccatggagaggcggtgcagtcggccttggaccatggcacaacaccccaggct
tcggtcccggcgggcacagacacccacgccggatcccggcagggccacagccaccaggcc
tcggtccggcgggcacagacaccccaggctcggatccgggagagcacagacaccccaagg
ctcggatcccggggagagcacagacacccccaggctcggtcccggcggggcacagacacc
cacgctcggtatccggagaggcacagacaccccaggctcggtcccggcggcacagacacc
cacgctcgatcccggcaggcacagcacccaggctcggatcccggcgggcacggagacccc
caggctcggatcccgggagaggcacagacaccccaggctcggttctcggcggcacagacc
ccaggctcggttccggcgggcacggaacccccaggctcggatcccggggagaggcacaga
caccccagccggatccgaggcacagccaccccaggctcggatcccggcgggcacggagac
ccccaggctcgatcccgggagagaccagaacccggctcggatacccggcagggcagcagc
caccccagctcggatcccggcgggcacagacaccccaggctcggatcccgggagaagcag
cacagaccccaggccggatcccgacaggcgcacaccacccaggctcggtcccggcggggc
acagacacccaggctcgatccggggaaggcacagacaccccaggctcgaatcccggcggc
acggaggacccccaggctcggatccgggagggcagcacagacagcccgcagagctcggga
tcccggcagggcacagccaccccaggctggtcccggcggggcacagacaccccagcttcg
gatcgcgggcatcgtccccaggccccccccctcggttccccgcggcggggcacagcaccc
cacgctcggatcccggcagcgacgtccaccgcgaatgcccgcgctgggcccggcgcacct
cccgcgggtgcatcggagcgactgccgcgcgtcggaatgccgcgtgcgcgagtgaggcct
agcgcccattcatcaccggcgcgatcctgctccatagcgcccttagcccacgctgcagcc
ccgggccatgccgcctgccccgctgcggccactcgcggccccgcccgccccaggcggcag
acgcgcggcgcgctcatcgcgcaggctggcggcgtccggtcgcctgccagtcgcggcgca
gcttcccggcgtgagtcctgccgggctgctcgttacttctgtggttctttaattctatca
atctcagctgatgctcactttccaatttcaaagtgttcccccacgtccagtatcttggcc
agtttccacggggttgtagaaactctcaggcagcctctactgcagaatgtccctcacctc
tgcctttcagaatggaatccatatcttagattgtcctgtgttcttcctcagggggaactg
gtaagaaagctgaaagaagagaaggctccccagatggatgtagacagagctgtagcagag
ctcaaggctcggaagaggatcctagaagccaaggagctggctttacagcccaaggatgac
attgtggacagaatgaaaatggaggacactctgaagcggaggtttttctatgatcaagct
tttgctatttatggaggtgttagtggcctgtatgactttgggcctgttggatgtgctttg
aagaacaacattatccaagcttggaggctgcactttatacaggaggatcagattctggag
atagactgcactatgctcaccccagagccaattctgaagacctctggccatgtagaaaaa
tttgctgacttcatggtgaaagatgtgaaaaatggggagtgttttcgtgctgatcatctc
ttaaaagctcacttgcagaagctgatgtctgacaagaaatgtacagctgagaaaaagaca
gaaatggaaaacgttttaacacagctggacaactacagtcagcaagagctcgcggatctc
tttgtgaattacaatgtgaagtctcctgtcacagggaatgacctgtcccctcctgtgtct
ttcaatctgatgttcaagacctccattgggcctggaggaaacatgccgggctatctgagg
ccagaaactgcacagggaattttcctcaacttcaaacgccttttggaatttaatcaaggc
aaactgcctttcgctgctgcccagattggaaattccttcaggaacgagatctcaccccgt
tctggcctcatccgagtcagagaattcaccatggcagaaattgagcactttgtggatccc
agtgagaagtatcaccccaagttccagagtgtggcagatctccacatcctcctgtactcc
tccaaagcccaggtcagtgggcagtccgcccacatgatgcgtctgggagatgctgttgag
cagggtgtgatcaataactctgtattaggttacttcattggcagaatctacctctacctt
ataaaggttggtgtatccccggataagctgcgcttccgacagcacatggagaacgagatg
gctcattatgcctgtgactgctgggatgcagagtccaaaacatcctatggttggattgag
attgttggttgtgctgatcgcgcctgttacgacctctcctgccacgccagagccaccaaa
gttcctcttgtagctgagaagcctctgaaagaacccaaaacagccagcgttgttcagttt
gaggcaaataagggagccattggcaaggcctacaagaaggatgcgaagctggtgctggaa
tacctttccatctgcgatgagtgttacatcagcgagatggagaagctgctgaatgagaaa
ggggaattcactgttgaaactgaagggaaaacttttcaattaacaaaggacatggtcagt
gtgaagagattccagaaaacactgcatgtggaagaaatagttccgaatgtgattgagccc
tcattcggcattggaaggatcatgtatacagtgtttgaacacacattccgtgtccgggag
ggagatgaacaacgaacgttcttcagcttccctgctgttgtagcacccttcaaatgctct
gtccttcctctgagccagaatcaggaattcatgccgttcgtcaaggagctatctgaggcg
ctcaccaggaacggcgtctcccacaaagtggacgactcctccggatccattggccggcgc
tacgccaggaccgacgagattggcgtggctttcggcatcacgatagactttgacacagtg
aacaaggtgcctcacacagccactctaagggaccgtgactccatgcgtcagatacgagcc
gaggtctctgaacttcctaccataatccgtgacctggcaaatggctgcctaacttgggct
gacgtggaggtaaagtatccactctttgagggacaagagactggcaaaaaagagacaata
gaggaagacaattacctgaaataa
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