Chelonoidis abingdonii (Abingdon island giant tortoise): 116833609
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Entry
116833609 CDS
T07367
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cabi03009
]
116833609 (DDX21)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116833609 (DDX21)
Enzymes [BR:
cabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116833609 (DDX21)
Ribosome biogenesis [BR:
cabi03009
]
Eukaryotic type
Pre-60S particles
Helicases
116833609 (DDX21)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116833609 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
DUF1833
AAA_30
Motif
Other DBs
NCBI-GeneID:
116833609
NCBI-ProteinID:
XP_032651117
Ensembl:
ENSCABG00000022926
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MPAAALLAADSEPETALEGEVARAGRRRKHKDKKEKKSKRRNKSKELKSQTEENELSEDD
LEPPKPKKKKKVKEKVNLEIEENSPDGKVKSSSMSNGIVRSKAQSNSSEASSAEYDSDQE
PVKQLTEEEKEGAFSNFSISKETTELLKARGVKYLFSVQAKTFQPIYDGKDVIAQARTGT
GKTFSFAIPLTEKLQGDTLERKRGRTPKVLILAPTRELAIQVARDFKDITKKLTVACFYG
GTPYRGQIEHIKNGIDILVGTPGRIKDHLQNSKLDLSNVKHVVLDEVDQMLDMGFAEQVE
EILAFAYKKVLCCFKDSEDNPQTLLFSATCPHWVYDVAKKYMKSKYEQVDLIGKKTKKTA
MTVEHLAIECHWSQRAAVIGDVIQVYSGSHGRTIIFCETKKDANELALNASIKQDAQSLH
GDIPQKQREITLKGFRNGAFEVLVATNVAARGLDIPEVDLVIQSSPPKDVDSYIHRSGRT
GRAGRTGICICFYQRKEEHQLRHVEQKAGITFKRVGVPTATDIIKASSKDAIRFVDSVPP
SAIDYFKQSAQRLIEEKGAVEALAAALAHISGATSIEQRSLLNSDAGYVTMTLQCSVEMH
SIGYAWRGLREQLGDEIDNKIPRMRFLKGKMGVCFDVPTAELSRIQEQWHDSRRWQLSIA
TELPELEETPREAGRGFSNFRNGRQGGGGFNKSNRFKNGGQKRSFHRAF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagccgccctccttgcagccgacagcgagcccgagaccgccctggaaggcgag
gtcgcccgggcgggccggaggaggaagcacaaggataaaaaggagaagaaatctaaacgc
cgcaataaatccaaggagctgaaatcccaaacagaggaaaatgagctatccgaagatgac
cttgagcctcctaaacccaaaaagaagaaaaaagttaaagaaaaagtgaatctagagatt
gaagaaaacagtccagatggcaaggtgaaatcctcgtccatgagcaatggcattgtccgc
tcaaaagctcagagtaattccagcgaagcatcaagtgcggaatatgacagtgaccaagag
ccagtaaagcaactgacagaagaggagaaagaaggtgccttctctaatttctctatctcc
aaagaaacaactgagcttcttaaagctcgaggagtaaagtacctgttttctgtgcaagca
aagactttccagcccatatatgatggcaaagatgtgatagctcaggctcgaactggaact
gggaaaacattttcttttgctattcctttgactgaaaaacttcagggagacacgctggag
aggaagagaggccgcacgccaaaggtgctaattcttgcgccaacgagagagctggcaatc
caggtagctagggactttaaggatatcacaaagaaactcacagtggcttgtttttatgga
ggaacgccatatcgtggacaaattgaacatattaaaaatggcattgacatcttagttgga
actccaggacgaattaaagaccaccttcagaatagcaagctggatctttccaatgtgaag
catgttgttttggatgaagttgatcaaatgttggacatgggatttgctgaacaagtggag
gaaattctagcatttgcttacaaaaaagtgttgtgttgtttcaaagattctgaagacaac
ccccaaacactgctgttttctgcaacttgtccacactgggtgtatgatgtggctaaaaaa
tatatgaaatccaaatatgaacaggttgatcttattggaaagaagactaaaaagacagct
atgactgtagagcatttggctatagagtgtcactggtctcagagagcagcagttattggg
gatgtcattcaggtttacagcggcagtcatggacggaccatcatattttgtgagactaaa
aaggatgcaaatgaactggccctgaatgcttcgattaaacaggatgcccagtcattgcac
ggtgacattccacagaaacagagagagatcacgttaaagggtttcagaaatggagcattc
gaagttttggttgcaaccaatgtagctgcccgtggtttagatatccctgaagttgacctg
gtcatacagagttcacccccaaaggatgtggattcatatatccatcggtctgggcgcaca
ggaagagctggacggactggaatttgtatctgtttttatcagcgaaaggaagaacatcaa
ttaagacacgtagaacaaaaagcgggcattacatttaagcgtgtaggtgtgcctacggca
acagatataattaaagcttccagtaaagatgctatcaggtttgtggattctgttcctcct
tctgccatcgactatttcaaacaatcagctcagcggctgatagaggaaaagggggcagtg
gaagctctggctgcagcattagcccatatttctggggctacttccattgaacagcgttcc
ttgctcaactcagatgcgggctatgtgacaatgacattacaatgttcggtagagatgcac
agcattggctatgcctggcgaggactaagagaacagcttggtgatgaaatagacaataaa
attcccagaatgcgttttctcaagggaaagatgggggtgtgcttcgatgtccctacagct
gagctaagtcgtatacaggagcaatggcacgattcaagacgctggcagctgtccatagca
acggagttacctgagctagaagaaactccgcgtgaagcaggccgaggtttctctaacttc
aggaacgggaggcaaggaggcggtggctttaacaaaagtaacagattcaaaaacggaggc
cagaaacgaagttttcatagagcattttag
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integrated database retrieval system
