Chelonoidis abingdonii (Abingdon island giant tortoise): 116833610
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Entry
116833610 CDS
T07367
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cabi03009
]
116833610
03036 Chromosome and associated proteins [BR:
cabi03036
]
116833610
Enzymes [BR:
cabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116833610
Ribosome biogenesis [BR:
cabi03009
]
Eukaryotic type
Pre-60S particles
Helicases
116833610
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116833610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
GMIP-like_FCH
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
116833610
NCBI-ProteinID:
XP_032651119
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MALRSALCDVAGKVVGVSRAAGGPALVQADDERLSRPLPAPHWLPAGEGVPGRSSFLSRL
SRFLAASSLPASALREMSEVTRLEASSGDEAESPMESGIAPESSRRRRRHKKDKKESESK
HHDKSKKRKSRTEENGLSEDDLEPPKLKKMKERESVNGDTGERRPEYKKKSFFLSNGVTP
TKTQCNFSDASSEECDSEQEQELTVEQKEGAFSNFCISKGTIELLRARGVTYLFPVQVKT
FKHIYDGKDVVAQARTGTGKTFSFAIPLIEKLQGEMQERKRGRTPKVLILTPTRELANQV
ARDFKDITKILSVACFYGGTAYNGQIDLIRSGIDILVGTPGRIKDHLQNGKLDLSKLKHV
VLDEVDQMLDMGFAEQVEDILRVAYKKDSEDPQTLLFSATCPHWVYDVAKKYMKSRYEQV
DLIGKRTQKAAVTVEHLAIECHWSQKAAVIGDVIQVYSGSHGRTIVFCETKKEANELALN
TSIKQDCQSLHGDIPQKQREITLKGFRNGVFKVLVATNVAARGLDIPEVDLVVQSSPPKD
VESYIHRSGRTGRAGRTGMCVCFYQRKEESQLRHVEQKAGITFKRVGVPTATDIIKASSK
DAIRCLDSVPQTAIDYFKESAQGLIEEKGAVEALAAALAHISGATSIEQRSLLNSDVGFV
TMTLQCSEEINNISYAWRGLREQLGDEIDRKVNRMCLLKGKMGVCFDIPAVDLRQIQGKW
QDSKHWHLTVATQLPELAETQREEGRGFYDSRNGRRGPSTYTACVLQELHPWANIPS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcgttctgctctatgtgacgttgctggcaaggtagtgggcgtgtcgcgagcc
gctggagggcccgccctcgtgcaagccgatgatgagcggttaagccggcccttgcctgcg
cctcactggttgccggccggcgagggggttccggggcggagttcgttcctctcacgcctg
tcccggtttcttgcggcaagttcgctcccggcgtccgctctgagggaaatgtccgaagtc
acccggctcgaagccagcagcggggacgaggccgagagccccatggagagcgggatcgcc
ccggagagcagcaggaggaggcggcggcacaagaaagataaaaaagagagtgagtctaaa
caccatgataaatccaagaagaggaaatcccgaacagaggaaaatgggctgtctgaagat
gaccttgaacctcccaaactcaaaaagatgaaggagagagagagtgtgaatggagatact
ggggaaagaagaccagagtacaagaagaaatccttcttcctaagcaatggagtcaccccc
acaaaaacacaatgtaatttcagtgacgcatcaagtgaagagtgtgacagcgaacaagag
caggaactgactgtagagcagaaggaaggtgctttctccaatttttgtatttccaaaggg
actattgagcttcttcgagctcgaggtgtaacatacctgtttcctgtacaagtaaagacc
ttcaagcacatatatgatggcaaagatgttgtagctcaagctcgaactggaactggaaaa
acattctcttttgccattcccttgattgaaaagcttcagggagaaatgcaagagaggaaa
agaggccgcacgccaaaggtgttaattcttactcccactagagagttggcaaaccaggta
gccagagacttcaaagacatcaccaagatactctcagtggcttgtttttatggaggaact
gcatacaatggacaaattgatttaattcgaagtggtattgacatcttggttgggacccca
ggtcgaatcaaagaccaccttcagaatggcaagcttgatctttccaaactcaagcatgtt
gtcctggatgaagttgatcagatgttggacatgggctttgctgaacaagtggaggacatt
ttacgagttgcgtacaagaaggattctgaagatccccagacattgctgttttctgcaact
tgcccacattgggtatatgatgtggctaagaaatacatgaaatccagatatgaacaggtt
gacctcatcgggaagaggactcagaaagctgctgtgacggtagaacatttggctatagag
tgtcactggtctcaaaaagcagcagttattggagatgtcattcaggtttacagtggcagt
catggacggaccatagtcttttgtgagaccaaaaaggaagcaaatgaactggccctgaat
acttctattaaacaggattgccagtcgctgcatggtgacattcctcagaaacaaagggag
ataacattgaaaggttttagaaatggagtgtttaaagttctggttgcaactaatgtagct
gcccgtggtttagatatccctgaagttgacctggttgtacaaagttcaccaccgaaggat
gtagagtcgtatattcatcgttctgggcgcacaggccgagctggacggactgggatgtgt
gtctgtttttatcagcgaaaggaagaaagtcagctaagacatgtggaacaaaaagcagga
attacatttaagcgtgtaggtgttcctactgcaacagatataataaaggcttccagcaaa
gatgccatcaggtgtttggattctgttcctcaaactgccattgactatttcaaagagtca
gctcaggggctgatagaggaaaagggggcagttgaagctctggctgcagcactagcccat
atttctggggctacttccattgaacagcgttccttgctcaactcagatgtgggatttgta
acaatgacattgcaatgctcagaagagataaacaatataagctatgcctggcgaggacta
agagaacagctgggtgatgaaattgataggaaagtgaacagaatgtgtcttctcaaggga
aaaatgggtgtgtgttttgatattcctgcagtggatcttagacaaatacagggaaaatgg
caggattcaaaacactggcatctgactgtggcaactcaattacctgagttggcagaaacc
cagcgagaagaaggcagagggttctacgactccaggaatggaaggcgaggaccctcaacc
tacactgcctgtgttcttcaggaactccatccctgggccaacataccctcatag
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