Chelonoidis abingdonii (Abingdon island giant tortoise): 116833721
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Entry
116833721 CDS
T07367
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116833721 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116833721 (SF3B3)
03041 Spliceosome [BR:
cabi03041
]
116833721 (SF3B3)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116833721 (SF3B3)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116833721 (SF3B3)
Spliceosome [BR:
cabi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
116833721 (SF3B3)
Complex B
116833721 (SF3B3)
Complex C
U2 SnRNP specific factors
116833721 (SF3B3)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
116833721 (SF3B3)
TFTC complex
116833721 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
116833721
NCBI-ProteinID:
XP_032651306
Ensembl:
ENSCABG00000023078
UniProt:
A0A8C0JGV2
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPGAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRRFVIHPESSNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFANAS
DDWHVLVGVAKDLILNPRSVAGGFIYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctttacaatttaacgttgcagcgagccactggcatcagctatgccatccatggc
aatttctcaggaaccaaacaacaggaaattgttgtttcccgggggaagattctggagttg
ctccgccccgatcccaacacggggaaagtacacaccttgctgacagtggaagtgtttgga
gtcattcgctccctcatggccttcagactgacaggtggaactaaagactatattgtggtt
ggtagtgattcgggtcgcattgttatcctggagtaccagccttccaagaacatgtttgag
aagattcaccaggaaacctttggcaagagtggctgtcgcagaatcgttcctggccaattc
ttggctgtggacccaaagggccgtgctgtcatgatcagtgccattgagaaacagaagctg
gtatacattctgaacagagatgcagccgcccggctcaccatttcttccccactggaagcc
cacaaggccaacaccttggtctaccatgtggtgggagtagatgtggggtttgaaaaccca
atgtttgcttgtctggaaatggactatgaggaagctgacaacgatccaacaggagaagca
gcagcaaacacccaacagaccctgacattttatgagttagacctgggtttgaaccacgta
gttaggaaatacagcgaacctttggaggagcatggcaacttccttattacagttcctggt
ggctccgatggtcccagtggagtgctgatctgttctgaaaactatatcacctacaaaaac
tttggtgaccagcctgatatcagatgtcccattcccaggagaaggaatgacttggatgac
ccagagaggggtatgatttttgtctgctctgctacacacaagaccaaatccatgttcttc
ttcctggcccagacggagcagggagatatcttcaaaatcaccctagagactgatgaagac
atggtgacggagatccgactgaagtattttgatactgttcctggggctgctgccatgtgt
gtgctgaaaacagggttcctctttgtggcatctgagtttggaaaccattacctgtaccag
atagcccatctgggagatgacgacgaggagccagagttctcctctgccatgcccctcgag
gaaggagacactttctttttccagccacgaccactcaagaacctggtgttggtggatgag
ctggacagtctgtctcctatcttgttttgtcagatagcggatctggccaatgaagataca
ccccagttatatgtggcctgtggacgggggcctcggtcatctctgagggtcctaaggcac
ggacttgaggtgtctgaaatggccgtctcagagctgcctggtaaccccaatgctgtttgg
actgtgaggagacacattgaagatgaatttgatgcctatattatcgtgtccttcgtaaat
gccacactggtgctgtctatcggagagactgtagaggaagtgactgactctggattcctg
ggtaccacccccactttgtcctgttccttgctgggggatgatgctttggtacaggtttat
ccagatggcatccggcacatccgagcagacaaaagagttaatgaatggaagacgccagga
aagaagaccatcgtaaagtgtgctgtgaaccagagacaagtggtgatagcactgactgga
ggagaattagtctactttgagatggacccatcaggacagctgaatgaatacacggagagg
aaggagatgtctgccgatgtggtgtgcatgagcctggccaacgtccctcctggggagcag
cgttcccgcttccttgccgtcgggttggtggacaacactgtcagaattatttcccttgac
ccttcggattgcttacaacccttgagtatgcaggccctccctgcacagccagaatcactg
tgtatcgtggagatgggtggggcagaaaaacaggatgagctgggcgagaggggctccatt
ggcttcctgtacttaaacattggattacagaatggtgtgctgctgcgaactgtcctggat
ccagtcactggagatctttctgataccagaaccaggtaccttggctcacgccccgtgaaa
ctcttcagggtccgaatgcaaggccaagaggcggtgctggccatgtccagtcgttcatgg
ctgagttattcttatcagtcccgctttcatctaacccccctgtcctatgagactctagag
tttgcatctggctttgcttccgagcagtgtccagagggcattgttgctatctccacaaac
acactgaggattttggcattggaaaagctgggggcagtcttcaaccaggttgccttcccg
ctgcagtacacccccaggaggttcgtcattcaccctgagagcagcaacctgatcatcatc
gagacagaccacaatgcttacaccgaggccacgaaggcccagaggaagcagcagatggct
gaggaaatggtggaggctgcaggtgaggacgagagggaactggccgcagagatggcagct
gcctttctgaatgagaatcttcccgagtccatcttcggggcccctaaggcaggcaatggc
cagtgggcttctgttgtccgagtgatgaaccccatccagggcaatactttagatctggtc
cagctagagcagaatgaagctgccttcagtgtggcagtgtgccgattcgccaacgccagt
gacgactggcatgtgctggtgggagtggccaaggacctgattctgaatccccggtcggtg
gctggtgggtttatctacacatacaagctggtgaataatggcgagaagctggagttccta
cacaagacccctgtggaggaggtacctgcagccattgccccattccaaggccgagtctta
attggagttggaaaactcttacgtgtgtatgacctgggcaagaagaagctgcttcggaag
tgtgagaacaagcacattgccaactacatctcgggcatccaaaccatcgggcacagagtg
atcgtgtcggatgtccaggagagcttcatttgggtgcgctacaagaggaatgagaaccag
ctgatcatctttgccgatgacacctacccccgctgggtcaccaccgccaccctccttgac
tatgacactgtggccggagcagacaagtttggcaacatctgtgtggtgagactgcctccc
aacacaaatgatgaggtagacgaggatccgacaggcaacaaggctttgtgggacagagga
cttctcaatggagcatcgcagaaggctgaggtgattatgaattaccacgtgggagagaca
gtgctgtcgttacagaagaccacgctgattccgggagggtctgagtctctcgtgtatacc
accttgtcggggggcattggtatcctggtccccttcacgtcccacgaggatcatgacttc
ttccagcacgtggagatgcatctgaggtcggagcatccccctctctgtggacgggaccac
ttgagcttccgctcctactacttcccagttaagaacgtgattgacggggacctttgtgaa
cagttcaactccatggaacccaacaaacagaagaacgtctcggaagagctggacaggacc
ccccccgaagtgtccaagaagctggaggatatccgcacgcgctacgccttctga
DBGET
integrated database retrieval system
