Chelonoidis abingdonii (Abingdon island giant tortoise): 116833817
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Entry
116833817 CDS
T07367
Symbol
ZNFX1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116833817 (ZNFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
SLFN-g3_helicase
ResIII
PhoH
DEAD
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
116833817
NCBI-ProteinID:
XP_032651473
Ensembl:
ENSCABG00000023154
LinkDB
All DBs
Position
Unknown
AA seq
1924 aa
AA seq
DB search
MDGRRPGQEPYPRLHNVNWRECQDAGLPQRGRNRAINAPGYPRRGAAQPGGNLRVNNNPL
PPGQREGRYHGEGQYPNQGRRNQGGQANDGPRGQWNEQENEARRRRRRNESQDGGRGRRI
HPCENPCFHQNPVPGGAQCQEPNEQPQQLRRIGYKFLDSLLQKDPSEVVITLASSSGLKE
LLSQTSMKPSFLQLICQVLRRACSSRMDRQSVQQLLGMVKESNFLKICLPQYVADMMTEV
IPAVRHQFPEHINNIISLLQDLVSIFPASSVQKISMLMSVLPASINALRASGVDITEQIE
KNLEKVLTLIQHLQEKRREGTLRADDYTLVQPQGDGQEETYRTMTIYPTYNEVHRDKKPF
LRPNIVSGRYDSTSVYLDTHFRLLREDFVRPLREGILELLQNFEDKGLRKRKFDDIRIYF
DTRIITPLCSSSGIVYKVQFDTKPLKFVRWQNSKRLLYGSLVCMSKDNFETFLFATVSNR
DNADLSQGIVQLCFNEHSQALLAEVQPSDSFLMVETTAYFEAYRHVLEGLQEIQEEDIPF
QKYIVECDVLVKEPAYLAMGSTYNLAPLIEEPSPVGKEGFLVSPDDLRRPRVNVLDPNQW
PSMEALKLDESQMQALQLALTKELAIIQGPPGTGKTYVGLKIVQAFLTNDQVWQSTLQKF
PILVVCYTNHALDQFLEGIYTSQKSGIVRVGGRSSSEILKQFTLRELRKKCEFRRSLPTH
LRRAYMNIITQMKRSEQELREGARHLECTAHGVLHERHLQRYITTQHWDSLMNGLDDEWF
YYKGSRNSMILEWLGLGVTAFTQNGAENPASENAGGQQDGEEEQEGEEEGEQLLEIPEEA
DLIQADRVIEEEEAARPQQRREDENGAVMELANMLLAMKLEKQGQGAAQPQQEAMEWEMQ
PAQRRKMKQKMRAELRKLNAMTEAEARGVQDLWQLDLSSRWRLYRRWLQMYQGEIRRKIL
QHEQQYQVAAERLAELRLQEDLCILKEALVVGMTTTGAAKYRQILQKVEPRIVIVEEAAE
VLEAHTITTLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEMSLFERLVKVGFPFVRLN
YQHRMRPEIAQLLTPHIYRELENHPSVLKYENIKGILSNLFFVEHDFPEQEIQEGKSHQN
PHEAQFVVELCKYLLCQDYLPSQITILTTYTGQLFCLRKLMPAKIFTGVKVHVVDKYQGE
ENDIILLSLVRSNKEEKAGFLQISNRICVALSRAKKGLYCIGNMGMLGKVPLWSKIIHTL
WEKGHIGRSLMLCCQNHPDTRTLVSKGADFCRVPEGGCSRPCEFRLNCGHVCTRACHPYD
LEHKEFQCMKPCQKVLCKDGHRCPQLCFERCGACMVKVLKTIPKCGHQQMVPCSTPESEF
CCQEPCQKYLKCGHRCSMSCGQECSVQCLEMVTVTLQCGHNQQVKCWITVEMKRGMPVKC
KTKCLIQLDCGHACPGSCHTCFEGRFHEHCKSPCKRFLICSHKCQQPCTRECPPCQQACQ
NHCIHSWCKKKCGEMCILCMEPCEWRCQHYQCTKLCSEPCNRPRCDVPCTKLLRCGHTCI
GLCGEPCPKKCRVCHQDEITQIFFGFEDEPDARFVELEDCGHIFEAQGLDHYMDEDEIVI
KLKVCPRCQTVIRKNLRYGTIVKRRLEEIERVKERIQGPVSEIETRRHRLQGVLEGKSVL
RRNLSIKYLMLEEKLTHPDLSTKSIGLLENLIGFYGRLGELMSSLNKLDVSEKEGLRRRL
AEIQEWLDKPRLSFTGQELFDLQSEIQRLTYLVSFLARCKTATAKMNTSISREIATLRQI
LEGTKKFTQEDEKVVKMKMEELKTALPESGLGISEEERVQIVSAFGYPQGHWFKCPNGHI
YVIGDCGGAMERSKCPECKAVIGGADHTLEHSNRLAPEMDGATHAAWSETANNMLNFEDL
RRLI
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaggagacctggacaagaaccctacccaaggctgcacaatgttaactggaga
gagtgtcaagatgctggcttgccacaaagaggcagaaaccgagcaattaatgcaccaggc
tatcctcggagaggagcagcccagcctggaggaaacctcagggttaacaataaccctctt
ccccctgggcagagggaaggaagataccatggtgaaggacaatatcccaatcagggaagg
agaaaccagggtggacaagccaatgatggacccagaggacagtggaatgagcaggaaaat
gaggccagaaggagaagaagaagaaatgagagccaagatggtggcaggggcagaagaatc
cacccttgtgaaaatccttgtttccatcagaatcctgttccaggcggagcccagtgccag
gagcccaatgaacagcctcagcaactcaggaggattggctacaaattcttggatagtctc
cttcagaaagacccctctgaagtggtcatcacacttgcctccagttcagggctcaaggag
cttctgtctcaaacatctatgaaacccagcttcctccagcttatttgccaggttcttagg
agggcatgcagctccagaatggaccgccaaagtgtccagcagctcctgggcatggtaaag
gaatcaaacttcctcaagatctgcctgccacagtatgttgcagacatgatgactgaggtg
attcctgctgtacgacatcagttccctgagcatataaacaacatcatctccctccttcag
gatctggtgagcattttcccagccagttctgtgcagaaaatctccatgttgatgtctgtc
ctgccagcatctataaatgccctgagagcatctggtgtggacattacagaacagattgag
aagaacctagaaaaagtcctgacccttattcagcatctgcaggagaagaggcgtgagggc
actctgagagctgatgactacaccctagtgcaacctcagggtgatggtcaggaagaaacc
taccgcacaatgaccatctaccccacatacaacgaggtgcatcgggataaaaagcccttt
cttcgtcccaatattgtctctgggaggtatgatagcaccagtgtttacctggacacgcat
ttccggctcctaagagaggactttgttaggccattaagggaaggcatcttggagcttttg
cagaactttgaggacaaaggtttgaggaaaaggaagtttgatgacatcagaatctacttt
gacacccggatcatcacccccctctgctcctcatctggcatcgtctacaaggtccagttt
gacacaaagcccctgaagtttgtgcgatggcagaattccaagcgtttgttgtatgggtct
ctggtttgtatgtctaaagacaactttgaaacattcctttttgccacagtgtccaaccgt
gataatgcagacctgtcccagggcattgtgcagctgtgctttaatgagcacagccaggcg
ctgctggcagaggtccaaccatctgactcctttctaatggtggagacaactgcttacttt
gaagcctaccgacacgtgctggaagggctgcaggagatccaggaagaagacatcccattt
cagaaatacattgtggagtgtgatgtgttggtgaaggagccagcatacctggcaatgggc
agcacgtacaaccttgcgcccctgatagaggagccttctccagttggaaaggagggtttc
ctggtgagccccgatgacttgagaagaccgagggtgaatgttctagaccccaaccagtgg
ccttcaatggaagccttgaagttagatgagtcccagatgcaagccctgcagttggcactc
accaaggagctggccattatccaggggcctcctggaactggaaagacctatgtgggtttg
aagatcgttcaggctttcctgaccaacgaccaggtgtggcaaagcactctccagaagttt
cccatccttgttgtctgttacaccaaccatgcattggatcagttcctggaaggaatctac
acctctcagaagagtgggattgtgcgagttggagggagaagcagcagcgagatcctgaag
cagtttaccctgcgagagctgcggaagaagtgtgaatttcgccgcagcctgcccacgcac
ctccgcagggcatacatgaatataatcacccagatgaaacggtcagagcaggagctgcgt
gaaggagcacgacacttagagtgtacagcacatggagtgttgcatgaacgccacttgcaa
agatatatcactacgcaacactgggacagcctgatgaatggtctggatgatgagtggttt
tactataagggttcaaggaactctatgattctggagtggttgggccttggtgttactgcc
ttcacccagaatggtgcagagaacccagcgtctgagaatgcgggtggccagcaggatgga
gaggaggagcaggagggggaagaggagggggaacagctgctggagatcccagaggaggct
gacctgattcaggcagaccgagtgattgaggaagaggaggcagccagacctcagcagagg
agggaagatgagaatggtgccgtcatggaactggcaaatatgctgctggccatgaagctg
gaaaagcagggtcaaggggcagcccagccacagcaggaagccatggagtgggagatgcaa
ccagctcagaggaggaaaatgaagcagaagatgagggctgagctccgtaaactgaatgca
atgactgaggcagaagccaggggtgtccaggacttgtggcagctggacctcagctcccgc
tggaggctgtacaggcgctggctacagatgtaccagggggagattcgacgaaagatcctg
cagcatgagcagcagtaccaggtggcagcagagaggttggcagaactgaggctacaggag
gatctctgcattcttaaggaggccctggttgtagggatgacgactacaggtgctgctaaa
tatcgtcagatcctgcagaaagtggagcctcgaattgtcatagtggaagaagcagcagag
gtgctggaggctcacaccatcactactctgagcaaagcctgtcagcacctcatcctcatt
ggagaccaccagcagttgcggcctagtgctaatgtgtatgacctggccaagaactttaac
ctggagatgtctctctttgagcggctggtgaaagtcggcttcccctttgtccgcttgaat
tatcagcaccgcatgcgccctgagattgcccagctcctcactccccacatataccgggag
ctggagaaccatccctctgtcctcaaatatgaaaacatcaaggggattttatctaatctt
ttctttgtggagcatgacttccctgaacaggagatccaggaagggaaaagccatcagaat
ccacatgaggcccagtttgtggtggagctgtgcaaatacctcttgtgccaggactacttg
ccctctcagatcaccatcctcaccacctacactgggcagcttttctgtttgcgcaaactc
atgcctgccaagatcttcacaggtgtgaaggttcatgtggtggataagtatcagggtgag
gagaatgacattatcttgctatcacttgtgcggagtaataaggaagagaaagctgggttc
ctgcagatttctaaccggatttgtgtagcattatccagagctaagaaagggctatactgt
attgggaatatgggaatgcttggcaaggtgcctctctggagcaagatcattcacaccctg
tgggagaagggtcatattggtcgctcactgatgctctgctgtcagaaccatcctgacact
aggactctggtctccaagggagcagacttctgcagagttcctgaagggggctgtagtcgc
ccctgtgaattcaggctgaattgtgggcatgtctgcactcgagcatgtcacccctatgac
ttagagcataaagagtttcaatgtatgaagccctgtcaaaaggtgctctgcaaagatggc
catcgttgcccccaactgtgctttgagcgctgtggagcatgcatggtgaaagtgctgaaa
accatcccaaagtgtggccaccagcagatggtcccttgctccactcctgagagcgagttt
tgctgtcaagagccttgtcaaaaatatctgaaatgtgggcacagatgtagtatgtcctgt
gggcaggaatgcagtgttcagtgtcttgagatggttacggtcacactgcaatgtggccac
aaccagcaggtgaagtgttggatcacagtggagatgaaacgtgggatgcctgtgaaatgc
aaaaccaaatgccttatccaactggattgtggccatgcatgcccaggttcctgccatacc
tgctttgaagggcgatttcatgagcactgcaagagcccttgtaagcgcttcctgatctgc
tcccacaagtgtcagcagccttgcaccagggaatgccctccatgccagcaagcctgtcag
aaccactgcatccacagttggtgcaaaaagaaatgtggagagatgtgtatcctatgcatg
gagccatgtgagtggcggtgtcagcactaccagtgtaccaagctttgctctgaaccatgc
aacaggccccgttgcgatgtaccatgcactaagctactgcgctgtggtcatacttgcatt
gggttgtgtggggaaccttgcccaaaaaagtgccgtgtgtgtcaccaggatgaaatcacc
cagatcttttttggctttgaggacgagccagatgctcgctttgtggaactggaggattgt
ggccacatctttgaggcccaaggcctcgaccattacatggatgaagatgaaattgtcatc
aagctgaaggtctgccccagatgccagacagtgatcaggaagaacttgaggtatggcacc
atcgtgaaaaggcgactggaggagatagagagagtgaaagagagaatccaaggtccagta
agtgaaattgaaactaggaggcacagactgcagggtgtgctggaagggaagtctgtgctg
cgaagaaatctgtccattaaatatctcatgctggaagagaagctgacacatcctgatctc
tccacaaagagtattggacttcttgagaacctgattggcttctatgggcgcctgggtgag
ctgatgagctccctgaacaagcttgatgtgagcgagaaggaaggactgaggaggcgactg
gctgaaattcaggagtggttggacaagccccggctaagcttcactggtcaggagctcttt
gacctccagagtgagattcagaggcttacatacctggtgagttttctggccagatgcaaa
acagcaactgcaaagatgaatacttctatctcaagagaaattgccactctgcggcagatc
ctagagggaacaaagaagttcacccaagaggatgaaaaggtggtgaagatgaaaatggaa
gaactaaagacagctctgccagagtctggcttgggaatctctgaggaggagcgagtgcag
attgttagtgcctttggctatccacaaggtcactggttcaagtgccccaatggccacatt
tatgtgattggtgattgcggtggggcaatggagaggagcaagtgcccagagtgtaaggca
gttattgggggtgcagaccacactctagagcacagcaaccgtctggcccctgaaatggat
ggggcaactcatgcagcctggtcagaaactgcaaataacatgctgaattttgaggacctt
cgcaggctgatatag
DBGET
integrated database retrieval system
