Chelonoidis abingdonii (Abingdon island giant tortoise): 116833834
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Entry
116833834 CDS
T07367
Symbol
SPTBN4
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04517
IgSF CAM signaling
cabi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116833834 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116833834 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cabi04812
]
116833834 (SPTBN4)
Cytoskeleton proteins [BR:
cabi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116833834 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
116833834 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH
Helical_needle
Motif
Other DBs
NCBI-GeneID:
116833834
NCBI-ProteinID:
XP_074926812
LinkDB
All DBs
Position
11:complement(974904..1046696)
Genome browser
AA seq
2407 aa
AA seq
DB search
MANGAAELDNMEVQLQNNNTHWENMDSQAWDDSTATAKLFECSRIKALADEREAVQKKTF
TKWVNSHLAQVSCRISDLYADLRDGYVLTKLLEVLSGEQLPKPTRGRMRIHSLENVDKAL
QFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALL
LWCQMKTAGPYPRVNIQNFTTSWRDGWILLTPXSHRHRPEIIDFSKLTKSNATYNLQQAF
NVAEQQLGLTKLLDPEDVNMESPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQAV
EIEKLMERYELLAAELLAWIERTVGIISNQKFANSLAGVQQQLQAFTTFCTLEKPLELLA
QRFDHKAGMREAWLGENQRLVAQDNFGYDLPAVEAAMKKHEAIEADVSSYEERIQVVVEL
ALALEAEGYYDVRRVSAQKGSILRQWGLLTELVAARRARLEQSLALQTIFQEMVYMIDWM
EEMQAPLLSREVGKHLLEVEDLLQKHALLEADVAAQNERVQALNQAALKFCELEGYQPCD
PQIIRNRVTHVQTCLEELCQRAAQRRMELEASRQLWAFFQELEEAEAWVREKEQILASKP
CGKDLSSVLQLSGQHKLMLGQLGGRRALLHQAVKKGEQLLATQCPGTAQLQEKLREVRQR
WKKLEEVTGMHQQKLQEALSFYQFSAETDDLLVWLQDTYRLASSDDFGHDEYSSQALLRK
HAAMVQELERHRAPVLALRAQLARLAPQHHQVLDVQIRIVEVEQLYGEVAEVAVLRHQWL
QDALAVYRMFGEVHACEGWLDEKEQWLSGMHVPQELEDVEVVQHRFESLDQEMNSVMGRI
LDVNETVQQLVEGGHPSASEVQSCRDHLNGRWNRVVELVEQRKEHLSSVLRIQNYLLECT
EIKAQIREKRCSVESSQYCSGDLGGVLALQRKLSAMEAVLVVLEPKLLELQQEGEALATA
HPAQALTILLHFEEISEEWEALKKTLQGCEDSLSVASRLQQFIQDLDNFLTWLVKTQASV
ASEELPSNLAGAERLLSQHVALKEEIDRYEEDYTKIQAASDLLALEEADVPCLSLQQWLQ
KLDVGWNKLLQMWESRREALVQAHIFHLFLRDVRQAETCLYNQASSLAHAELPTTVEAAE
KAIKMHRDFITTMELSVPKTTLALRAGESLVRQGSPYSERAQEEMAALRDKSHRNFQLAQ
EWMQQLNDQLDLQRFLQNCHEMTFRMKRVSLRLSCGQDGPLAPGLLMSEGSVATDPCPLL
CGASSSWRRSRSWRLRWKKHVGGDRECWVELYDGREARAQRLRGQQRRALVAVASRTWTM
RDCEHAGELRAQRWLPGTAAAPIPAAPDRPPHRPGSPGPVALAAPRSPRMPRALDRPAPP
PRASGPAAPLRLQPTPSRALPASMAGRLRGEGGARSRGHEGQQLMEEKPELAGSVKKQLE
EIRQCWVELEGTAQARAQQLFEASKAEQLVQSYADLDKRLVNMEGQLQAVDAGASLATVN
NQLKKLQTMESQMEEWYKEAGQLQAQLASLPLEPASKEAVDEKQTSVGMRIVRLIEPLKE
RRRILLASKEMHQVCHDLEDEISWVQDRLPLATLRDPGSSLQAVQNFIKKNQNLRRELQV
HQPRVAEVLERAGALTSMKIPEVAGVQLLLEKLRELWGALQEQTEQRQHLLDTTYQVEQY
YFDVGEVEAWLSEQELLLMNEEKGKDEQGTLQLLKKHLLLEQSIENYEETVAQLSRQCRA
LLELGHPDSEQISRRQSQADRLYVSLKDLAEERKAGLEQQYWLYQLSREVDDLEHWIAEK
EVVAGSPELGQDFEHVTLLQEKFTAFASETGSVGNERLSAVNQMVDELIDCGHVDAATIA
EWKDGVNEAWADLLELMETRAQMLAASHELHKFFSDCKDLLAQIEEKKQRLPEAAARESR
SSAGALQRVLSSFEHDVQVLVSQVRQLQEGAAQLRTVYAGENADAIATKEQDVLRAWKEL
LGSCEACRLQITTTTDKMRFTSMVRDLVSWMDDVICQIGTGEKPRDMSSVEVLMNYHQGL
KSEIEARSQSIAACVELGKTLVLNRSPVAEECWKVHQFAQRRVADGWLTAHEMKLERLQP
RLDRVQGGTGRWRPEMAQEQKRRTEGRCWQPSRASTFNVPTVSPGLAEPAQVHQAETQPE
QPREQCPEPSEQEMPRHEQAERRRERRERRLERQESSEQEMPRHEQAERRRERHERRLER
QESSEQETPRHEPKGGGKTTLADIVEQLQEKESTAQVPAPPRDSPARLPNGLDLLPERTP
RPDRPRARDRPKPRRRPRPRDPSQPPGESRRSRSAPAQSSAPPPPVRDTRPCGGSGCLGR
TSDGNEFLLQAKDEEEMKKWLQVLAASAEEHAEIARWSQALLTTSSTDEGNPRREGDRRA
STSGRRK
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atggccaacggagcagccgagctggataacatggaggtgcagctgcagaacaacaacacc
cactgggagaacatggacagccaggcctgggatgactccacggccaccgccaagctgttc
gagtgctcccgcatcaaagcacttgccgatgagcgcgaggctgtgcagaagaaaaccttc
accaagtgggtgaactcgcacctggcccaggtgtcctgccgcatcagtgacctctacgcc
gacctccgcgatggctacgtgctgaccaagctgctggaggtgctgtccggggagcagctg
cccaagccgacgcgcgggcgcatgcggatccactcgctggagaacgtggacaaagccctg
cagttcctgaaggagcagcgggtgcacctggagaacgttggctcgcacgacatcgtggac
gggaaccaccgcctgacgctggggctcatctggaccatcatcctgcggttccagatccag
gtgattaaaattgagacggaagacaacagggagacccgctcggccaaggacgcgctgctg
ctctggtgccagatgaagacggcagggccgtatccccgagtgaatatccaaaacttcacc
accagctggagagacggctggatccttctaacgccctgaagccaccggcataggccagag
atcattgacttcagcaaactcaccaaatccaacgctacttacaacctgcagcaggccttc
aacgtggccgagcagcagctgggcctgaccaagctgctggacccggaagacgtgaacatg
gagagcccggacgagaagtccatcatcacctatgtggtctctttctaccactacttctcc
aaaatgaaggccctcgcagtggaggggaagaggattgggaaggtgctggaccaggcggtg
gagatcgagaagctcatggagcggtacgagctgctagcagccgagctgctggcgtggatc
gagcgcaccgtcggcatcatcagcaaccagaagttcgccaactccctggccggggtgcaa
cagcagctccaggccttcaccaccttctgcaccctggagaagccgctggagctgctggcc
cagcgcttcgaccacaaggccggcatgcgggaggcctggctcggcgagaaccagcggctg
gtggcgcaggacaacttcggctatgacctgccagcggtggaggcggccatgaagaagcat
gaggccattgaggcggacgtctcatcctacgaggagcgcatccaggtggtggtggagctg
gcgctggccctggaagctgagggttactacgacgtgcggcgcgtcagtgcccagaagggc
agcatcctgcgccagtgggggctgctgaccgagctggtggctgcccggagggcccgcctg
gagcagagcctggccctgcagaccatcttccaggagatggtttacatgatcgactggatg
gaggagatgcaggccccgctgctgtcgagggaggtggggaagcacctgctggaggtggag
gacctgctgcagaaacacgccctgctggaggctgatgtggctgcccagaatgagcgggtg
caggcactcaaccaggccgccctgaagttctgcgagctggagggttaccagccctgcgac
ccccagatcatccgcaaccgcgtgacccatgtgcagacgtgcctggaggagctatgccag
cgggcagcccagcggcgcatggagctggaggcctcccgccagctgtgggccttcttccag
gagctggaggaggcggaggcctgggtgcgggagaaggagcagatcctggcctccaagccg
tgcggcaaggacctgagcagcgtgctgcagctgagcgggcagcacaagctgatgctggga
cagctgggagggcgccgggccctgctgcaccaggccgtgaagaagggggagcagctgctg
gccacccagtgccccggcacggcccagctgcaggagaagctgcgggaggtgcggcagcgc
tggaagaagctggaggaggtgacgggaatgcaccagcagaagctgcaggaggctctgagc
ttctaccagttcagcgcggagacggacgacctgctggtctggctgcaggacacctaccgc
ctggcctccagcgacgacttcgggcacgacgagtactccagccaggcgctgctccgcaag
cacgcagccatggtgcaggagctggagcggcaccgggcgcctgtgctggccctgcgcgcc
cagctggcccggctggccccccagcaccaccaggtgctggacgtgcagatccgcatcgtg
gaggtggagcagctctacggggaggtggccgaggtggccgtgctgcggcaccagtggctg
caggacgccctggctgtgtaccgcatgttcggcgaggtccatgcctgcgagggctggctg
gacgagaaggagcagtggctctccgggatgcacgtgccgcaggagctggaggacgtggaa
gtggtgcaacacaggtttgagagcctggaccaggagatgaacagcgtcatggggcgcatc
ctggacgtgaacgagaccgtgcagcagctggtggaggggggccatcccagcgcatccgag
gtgcagtcctgtcgggaccacctgaacggcaggtggaaccgggtggtggagctggtggag
cagaggaaggagcatctcagctccgtcctgaggatccagaactacctgctggagtgcacc
gagatcaaggcgcagatccgggagaagcgctgctctgtggagtccagccagtactgcagc
ggcgacctgggtggtgtcctggccttgcagcgcaaactctccgccatggaggctgtcctg
gtggtgctggagcccaagctcctcgagctgcagcaggagggagaggccttggccaccgct
cacccggcccaggcgctgaccatcctgctgcacttcgaggagatcagtgaggagtgggag
gccttgaagaagacgctgcagggctgcgaggactcgctctccgtggccagccggctgcag
cagttcatccaggacctggacaacttcctgacctggctggtgaagacccaggcatccgtg
gcctcggaagagcttcccagcaacctggcgggggcagagcggctgctgagccagcacgtg
gccctcaaggaggaaatcgaccgctacgaggaggactacaccaagatccaggcggccagc
gacctgctggccctggaggaggctgacgtcccctgcctctcgctccagcagtggctgcag
aagctggacgtgggctggaacaagctgctgcagatgtgggagagccggcgggaggcgctg
gtgcaggcgcatatcttccaccttttcctgagggacgtgcggcaggctgagacgtgtctc
tacaaccaggcgtccagcctggcccacgcggagctgcccaccacggtggaggcggcggag
aaggccatcaagatgcacagggatttcataactactatggagctgagcgtgccgaagacg
acgctggctctgcgggccggggagagcctggtgcgccagggcagcccctacagtgagcgc
gcccaggaggagatggcagcgctcagagacaagagccaccggaacttccagctggcccag
gagtggatgcagcagctgaacgatcaattggatctgcagcggttcttgcagaactgtcac
gagatgaccttccgcatgaagcgtgtcagcctgcgcttgagctgcgggcaggatgggcct
ttggcaccaggcctgcttatgagcgagggcagtgtagcgactgacccatgccctctgctc
tgcggggccagcagctcatggaggagaagccggagctggcggctccgatggaagaagcat
gttggaggagatcgcgagtgctgggtggagctctatgatgggcgggaggcccgggcccag
cgtcttcgaggccagcagcgcagagcactcgtcgcagtagcttcgcggacctggacaatg
agggattgtgaacatgccggcgagctgcgggcacagaggtggctaccgggcaccgccgcc
gccccgatccccgcagctcccgatcggcctccgcaccgccccggcagccccggtcccgtc
gccctcgcagcccctcgcagcccccgcatgccccgcgctctcgatcgccccgcaccgccc
ccgcgcgcctccggtcccgcagccccgctccgcctgcagccgacgccctcccgcgccctg
cccgcgtccatggccgggcggctgcgcggggaggggggggcccggtcccggggccacgaa
ggccagcagctcatggaggagaagccggagctggccggctccgtgaagaagcagttggag
gagatccggcagtgctgggtggagctcgagggcacggcgcaggccagggcccagcagctc
ttcgaggccagcaaggcagagcaactcgtgcagagctacgcggacctggacaagaggctg
gtgaacatggaggggcagctgcaggctgtggatgctggcgccagcctggccaccgtcaac
aaccagctgaagaaactccagacgatggagtcacagatggaggagtggtacaaagaggcc
gggcagctccaggcgcagctggcctccctgcccctggagccggccagcaaggaggcggtg
gacgagaagcagacctcagtggggatgcggattgtccgcctcatcgagcccctgaaggag
aggaggaggatcctgctggcttccaaggagatgcatcaggtctgccacgacctggaggat
gagattagctgggtccaggaccggctgccgctcgccaccttgcgagatcctgggagcagc
ctgcaggccgtgcagaacttcatcaagaagaaccagaacctgcggcgtgagctgcaggtg
caccagccccgggtggccgaggtgctggagcgggcgggcgccctcacctccatgaagatc
cccgaggtggccggggtgcagctgctgctggagaagctgcgggagctgtggggggcgctg
caggagcagacggagcagcgccagcacctgctggacaccacctaccaggtggagcagtat
tacttcgacgtgggcgaggtggaggcctggctcagcgagcaggagctgctgctgatgaac
gaggagaagggcaaggacgagcagggcaccctgcagctgctgaagaagcacctgctgctg
gagcaaagcattgagaactacgaggagacggttgcccagctgtcccgccagtgccgcgcc
ctgctggagctgggccaccccgacagtgaacagataagtaggcggcagtctcaggctgac
cggctctacgtgtctctgaaggacctggcggaggagcgcaaggccgggctggagcagcag
tactggctctaccagctcagccgcgaggtggatgacctggagcactggatcgccgagaag
gaggtggtggccgggtcgccggagctgggccaggacttcgagcacgtcacgctgctgcag
gagaagttcacggcgttcgccagcgagacgggcagcgtgggcaacgagcggctctcggcc
gtgaaccagatggtggatgagctgatcgactgcgggcatgtggacgcggccaccatcgcg
gagtggaaggacggggtgaacgaggcctgggctgacctgctggagctgatggagacgcgg
gcccagatgctggccgcctcccacgagctgcacaagttcttcagcgactgcaaggacctg
ctggcccagatcgaggagaaaaagcagcggctgccggaggcggcggctcgcgagtcccgc
agctccgccggggccctgcagcgggtgctcagctccttcgagcatgacgtgcaggtgctg
gtgagccaggtgcggcagctgcaggagggggcggcccaactgcggacagtgtatgccggg
gagaacgccgatgccatcgccaccaaggagcaggacgtgttgcgggcgtggaaggagctg
ctgggctcgtgcgaggcgtgccggctgcagatcaccaccaccacggacaagatgcgcttc
accagcatggtgcgcgacctcgtctcctggatggacgatgtcatctgccagatcggcacc
ggcgagaagcccagggacatgtcctcggtggaggtgctgatgaactatcaccaggggctg
aagagtgagatcgaagcccggagccagagcatcgcggcctgcgtggagctgggcaagact
ctggtgctcaacagaagccctgtggctgaggagtgctggaaagtgcaccagtttgcacag
aggcgtgtggccgatggctggctcaccgcccacgagatgaagctggagcggctgcagccc
cggcttgaccgcgtgcagggaggcactggccgctggcgcccggagatggctcaggagcaa
aagcgacggactgaaggaagatgctggcagccaagccgagccagcaccttcaatgtgccc
acagtgagcccggggctggcggagccggcccaagtccaccaggccgagacgcagccggag
cagccgcgggagcagtgcccggagcccagcgagcaggagatgccacgccacgagcaggcg
gagaggcgccgggagcgccgggagcggcgcctggagcgtcaggagtccagtgagcaggag
atgccgcgccacgagcaggcggagaggcgccgggagcggcacgagcggcggctggagcgg
caggagtccagcgagcaggagacaccccggcacgagcccaaagggggcggcaagaccacg
ctggcggatattgtggagcagctgcaggagaaggagtcgaccgcgcaggtgccggcccca
cctcgcgactctcccgcccgccttcccaatggcctcgacctgctgcccgagaggacgccg
cgcccggaccggccgcgggcccgtgacaggcccaagcccaggaggaggccgcggcccagg
gaccccagccagcccccgggggagagccgcaggtcccgctcggcgccagcccagagcagc
gccccacccccccccgtcagagacaccaggccctgcgggggcagcggctgtctgggcagg
actagtgacgggaacgagttcctgctgcaggccaaggacgaggaggagatgaagaagtgg
ctccaggtgctggctgcctccgccgaggagcacgccgagatcgcccgctggagccaggct
ctgctcaccacctcctccaccgacgaaggcaacccccggcgggagggcgaccggcgggcc
agcacgtccggcaggaggaagtga
DBGET
integrated database retrieval system
