Chelonoidis abingdonii (Abingdon island giant tortoise): 116834160
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Entry
116834160 CDS
T07367
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116834160 (DSCAML1)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
DSCAM family
116834160 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_DSCAM-DSCAML_C
ig
Ig_2
V-set
Pur_ac_phosph_N
C2-set_2
Interfer-bind
fn3_2
Ig_6
C2-set_3
V-set_CD47
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
116834160
NCBI-ProteinID:
XP_032651965
LinkDB
All DBs
Position
Unknown
AA seq
1532 aa
AA seq
DB search
MKNITAVAGRDTFINCRVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLMDVQKGMDE
GEYLCSVLIQPQLSISQSVHVTVKVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRITW
RKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPP
RFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPLTGRIQILPNS
SLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPNTTIAIKGQMKELNC
TARGERPIIIRWEKGDTVIDPDRNMRYAISTKDNGDEVISTLKLKPADRGDSVFFSCHAI
NSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDS
WDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPP
MDVTLQPMTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEV
YTLDNLKKFAQYGVVVQAFNRAGTGPSSREINATTLEDVPSQPPENVRALSITSDVAVIS
WLEPPRSTLNGVLKGYRVIFWSLYMDGEWGEMQNITTTRERVELRGMEKFTNYSVQVLAY
TQAGDGVRSSVLYIQTKEDIPGPPARIKAIPSSASSVVVSWLPPTKPNGIIRKYTIFCSS
PGSGQPAPSEYETSPKQLFYRIAHLNRGQQYMLWVAAVTSAGRGNISEKVTIEPAGKAPA
KIISFGGTVTTPWMKDVRLPCNSVGEPAPAIKWTKDSEDSAIPVAADGHRLIQANGTLVL
RLVKAEDSGYYTCTATNTWGFDTIIINLLVQVPPDQPRLTVSKTSASSITLAWIPGDNGG
SSIRGFVLQYSVDNSEEWKDVFISSTERSFKLDSLKCGTWYKVKLAAKNSVGAGRISEII
EAKTHGREPSFSKDQHLFTHINSTHARLNLQGWSSGGCPIMAIVLEYRPKGNWVWQSLKT
NNSNEVFLTELREATWYELRMKACNSAGCGNETTQFATLDYDGSTIPPIKSAQEEGDDVK
KLFTIACPVILATLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPP
QGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDTEFSQAVNPQSFCTGVSLHHPALI
QNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVG
SQHGIMVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQHAKFE
ITECFISDSSSDQMTTGTNENADSMTSMSTPSEPGICRFTASPPKPQDSDRGKNVAVPIP
HRANKSDYCNLPLYMKSEAFFRKPDIHDPSPVVPPREASIRNLARAYHTQARHMTLDPGS
KPLGLPQPGSSTTTLPQRTLTMPVSANSASASTAAASAPATDPTATTIDEPRMPTHTKMG
GSRDSLLEMSTSGIGRSQKQGAGAYSKSYTLV
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatataacggcagtggcgggtagggacaccttcatcaactgccgggtgatcggg
tatccgtactattccatcaagtggtacaaggatgccttgctgcttccagataaccaccgc
caggtggtctttgagaacgggacccttaagctgatggatgtacagaagggcatggatgaa
ggggagtatctctgcagcgtcctgatccagccgcagctttccatcagccagagcgtccac
gttaccgtgaaagtccctcccctgatccagcccttcgagttcccaccggcctccatcggc
cagctcctctacatcccctgcgtggtctcctcgggggacatgcccatccgcatcacttgg
cggaaggatgggcaggtgatcatctcaggctcgggggtcacgatcgagagcaaagagttc
atgagctccctgcagatatccagcgtctccctcaagcacaacggcaactacacgtgcatt
gccagcaacgccgccgccaccgtcagccgtgagcggcagctgatcgtgcgagtgccacct
cgtttcgtggtccagcccaacaaccaggacggcatctatggcaaagcaggggtgttgaac
tgctctgtggatgggtatccccctcccaaggtcatgtggaagcatgcaaaaggaagcggg
aacccccagcagtaccatcctgtgcccctcacgggccgcattcaaatcctccccaacagc
tcactgctcattcgccacgtgctggaggaggacatcggctattacctttgccaggccagc
aacggcgtggggacggacatcagcaagtctatgttcctcaccgtcaagatcccagccatg
atcacgtcccatcccaacacgaccattgcaatcaagggccagatgaaggagctgaattgc
acagcccgaggggagcggccaatcatcattcgctgggagaaaggcgacactgtcatcgac
cccgaccgcaacatgagatatgccatctccaccaaggataatggtgacgaggtcatttca
acgctcaagcttaaaccagccgaccggggggactccgtcttcttctcctgccatgcgatc
aattcctatggtgaagacagaggattgatccagctcactgtccaagagcctcctgatcct
ccagagctggagattcgtgaggtgaaagcccgaagcatgaacttgcgctggactcagaga
tttgatggaaacagcatcatcactggctttgatatcgaatacaagaataaatctgattcc
tgggattttaagcaatctacccgcaacatctctcccaccattaaccaggctaatatagtg
gacctgcacccagcctccgtgtacagcatccgcatgtactccttcaacaagattgggcgc
agcgagccgagcaaggagctcaccatcagcactgaggaagcagctccggatgggccccca
atggatgtcaccttgcagccaatgacatcacagagtatccaggtcacctggaaggcccca
aagaaggaactccagaatggggtgatccgtggctaccagatcggctaccgtgaaaacagc
cccggcagcaacgggcaatacagcattgtggagatgaaggccacgggggacagtgaggtc
tacactttggacaacctgaagaagtttgcacagtatggggtcgtggtgcaggcattcaac
cgcgcagggacgggaccctcctccagagagatcaatgccaccacactcgaggatgttccc
agccagcctccggagaacgtgagggcattatccatcacgtcagatgtggctgtgatctcc
tggttggagcccccacgtagtaccctgaatggcgtgctcaaggggtacagagtgatcttc
tggtctctctatatggacggagagtggggggagatgcagaacatcaccaccacacgggag
cgcgtggaattgcgggggatggagaagttcaccaactacagtgtccaggttctggcatac
acgcaggccggcgatggtgtccgcagcagtgtgctctacatccagaccaaggaggacatt
ccaggcccccccgccaggataaaagccatcccatcttctgccagcagcgtggtcgtgtcc
tggcttcccccaactaagccgaacgggatcatccggaaatacaccatcttctgctccagc
cctgggtccggacagccagcccctagcgagtacgagaccagccccaagcaactcttctac
cgcatcgcccacctcaaccgcgggcagcagtacatgttgtgggtggcggccgtgacctcg
gcaggacgtggcaacatcagtgaaaaggtcaccattgagcctgctgggaaagccccagcc
aagatcatctccttcggcggcaccgtcaccactccgtggatgaaggacgtgaggctgccg
tgcaattcggttggggagccggcccctgccattaaatggacaaaggacagcgaggattct
gccatccctgtggcagcggatgggcaccggctgatccaggccaacggcacactggtcctg
cgcttggtgaaagcagaggattctgggtattacacctgcaccgctaccaacacgtggggc
tttgataccatcatcatcaacctgctggtgcaagttcccccagaccagccgcgcttgact
gtatctaaaacctccgcttcatccatcacattggcctggattcctggggacaacggtggt
agctccatcagaggctttgtgctgcagtactcggtggacaacagcgaggagtggaaggac
gtgttcatcagctccaccgagcgctcgttcaagctggacagcctcaagtgcggcacgtgg
tacaaggtgaagctggcagctaagaacagcgtgggggccggccggatcagtgagatcatc
gaggccaagacacacggcagagagccctccttcagcaaggaccagcatctcttcacccac
attaattctacgcacgccaggctgaacctgcagggctggagcagcgggggctgccccatc
atggccattgtcctggagtaccggcccaagggcaactgggtctggcagagcctcaagacc
aacaactcgaacgaggtcttcctgacggagctgcgcgaggccacctggtacgagctgcga
atgaaggcctgcaacagcgctggctgcgggaacgagaccacccagttcgccacgctggac
tacgacggcagtaccattcccccaatcaaatctgctcaggaggagggggatgacgtgaag
aagcttttcaccatcgcctgccctgtgatcctggccacacttggggtggccctgcttttc
atcatccggaagaagaggaaggagaagcgtctgaagagattgagagatgcaaagagcttg
gcagaaatgctaataagcaagaataaccggagctttgacaccccagtgaaagggcccccc
caggggccccggctgcacattgatattcctcgtgtccagctgctcattgaggataaggag
ggcatcaagcagctgggggatgataaggctacaataccagtgacagacacggagttcagc
caagctgtgaatccccagagcttctgcactggggtatccttgcaccatccagctctgata
cagaacactggacccttgattgacatgtctgacattcgacctggcaccaacccagtttcc
cggaagagtgtgaaatctgcgcacagcacccggaacaggtactctagccaatggactctc
accaaatgccaggcgtctactcctgcacgtactctgacatcagactggaggactgtggga
tcccagcatggaattatggtcacagagagcgacagctacagtgccagtttatctcaggac
acggacaaagggcggaacagcatggtgtctacagagagcgcctcatccacctacgaggag
ctggcacgagcctacgagcacgccaagctcgaggagcaactgcagcatgccaagtttgag
atcacagagtgcttcatctcagatagctcctccgaccaaatgaccacaggcaccaatgaa
aacgcagacagcatgacatccatgagcaccccatccgagccaggtatctgcaggttcacc
gcctccccacccaagccccaggacagcgacagaggcaagaacgtggcagtgcccatccca
cacagagctaacaagagtgattactgcaaccttcccttgtacatgaaatcagaagcgttc
ttccgcaagcctgacatccacgatccttctccagtggtcccgcccagggaagcctccatc
cgaaacctagctagggcttatcacacgcaagcgaggcatatgacgctagacccaggcagc
aagcctttgggcctgccgcagccgggctcctccacaactactttacctcagagaactctc
accatgcctgtctcggcaaactccgcttctgcttctacagctgctgcttccgctcctgcc
accgatcccacagctaccaccattgatgagccacgcatgcccacacacaccaaaatggga
ggctcgagagactctctactagaaatgagcacatctggtatagggagatctcaaaaacaa
ggggctggagcatactccaaatcctacactcttgtgtag
DBGET
integrated database retrieval system
