Chelonoidis abingdonii (Abingdon island giant tortoise): 116834422
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Entry
116834422 CDS
T07367
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cabi03041
]
116834422 (PRPF39)
Spliceosome [BR:
cabi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116834422 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_12
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
116834422
NCBI-ProteinID:
XP_032652373
Ensembl:
ENSCABG00000021165
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MQNSDHTEDDCNLRNDNTVNSTGAAGEQLMDFSTEIMSVTEMEQSPDSSPDVNEEITQES
GIPNIQSLHTTDVEAHFPPEYEKFWKVVEENPQDFTGWVYLLQYVEQENHLLAARKAFDR
FFTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPV
DPETNNTVRGAYEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFKEHIQNNLPRDLLTPEQFIQLRRELASVNGHNGDDAPPGDDLPTGIEDITDPA
KLITEIENMRHRIQEIHQEMFNHNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARRILKTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQE
AVKNAKSSGESSFYAIKLTRHLFKVQKNFPKARKVLLEAIERDKENTKLYLNLLEMEYSG
DLKQNEENILTCFDKAVNGTLSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQTLLKE
QDSLKRKAENGSGEPDEKKAHTDDVTLASGQMMDGDMQANQAAYNYNAWYQMKLSFCIHT
ASVHEFVPLSWTKSGKDWLFGDLTRLIWVCLHKKDAKIHKQLREISLSSCWNLVPCSWRT
THFCRKATSGLPC
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactcagatcatacagaggatgactgtaacctacgtaatgacaacacagtcaat
agcactggtgcagcaggagagcagcttatggactttagtacagagattatgagtgtcaca
gagatggaacagtctcctgatagctctcctgatgtaaatgaggagatcacacaagagagt
ggaataccaaatattcaaagtttacacacgactgatgttgaggctcatttccctcctgaa
tatgagaagttctggaaagtagtagaggagaatccccaggatttcacaggttgggtatat
ctgctgcagtacgtagagcaggagaaccacttgctggctgccaggaaagcatttgacaga
tttttcacacattatccatattgctatggatattggaaaaagtatgcagaccttgaaaag
cgacatgacaacattaaacagtctgatgaggtgtatcggagagggctgcaggcaatacct
cttagtgttgatctttggatacattatataaacttcttaaaagagacactggatcctgtt
gaccctgaaactaataataccgtaagaggagcctatgaacatgcagtcttagctgcaggg
acagatttccgctctgacagactatgggaaatgtatataaattgggaaaatgaacaaggc
aatctacgagaagttacagctatatatgatcgtatcctggggattccaacgcagctctat
agccatcacttccagagatttaaagaacacatacaaaataatttgcctcgagaccttcta
actcctgagcagtttattcagctgcgccgggaattggcgtctgtcaatggccataatggg
gatgatgcaccacctggagatgaccttcctactggaattgaggacataactgaccctgca
aagctaatcactgagatagaaaacatgagacatagaatccaagagattcatcaagaaatg
ttcaatcacaatgaacatgaagtcagcaagaggtggacctttgaagaaggaataaaacga
ccttacttccatgtaaaacctttggagaaagcccagttgaaaaactggaaagaatactta
gagtttgagatagaaaatgggactcatgagcgagttgtggtcctctttgaaagatgtgtt
atttcatgtgccctctatgaggacttctggattaagtatgccaagtatatggagaatcac
agtattgaaggagtgagacatgtctacagcagggcctgtacaatacaccttcctaagaaa
ccaatggttcatatgctatgggctgcctttgaagaacagcaggggaacatcaatgaagca
agaagaattttgaaaacatttgaagagtgtgttctgggacttgcaatggttcgcttgcga
agagttagcttagaacgccgacatggaaacatggaagaagctgagcacctgcttcaggaa
gctgttaagaatgctaaatcaagcggtgaatcgtcattttatgccatcaaactaactcga
catcttttcaaagttcagaagaactttccaaaagcaagaaaagtgctgttggaagccatt
gagagagacaaagagaacactaaattgtatctcaacttacttgaaatggagtatagtggg
gatcttaagcaaaatgaagaaaacatcctcacatgttttgacaaagctgtcaatggtaca
ttgtctataaaaatgaggattacattttctcaacgaaaagtggaatttctggaagatttt
ggttctgacgtcaacaagcttttggatgcctatgatgaacatcaaactcttctaaaagag
caggattctttaaaaaggaaagctgaaaatggctcaggggaacccgatgagaagaaagca
catacagatgatgtaacgttggcatctggccaaatgatggatggagacatgcaagcaaat
caggcagcatataattataatgcatggtatcagatgaaactttccttttgcatccacact
gcctctgtacatgaatttgttcctctgtcgtggaccaagagtggcaaagactggctcttc
ggcgacttgactcgtcttatatgggtctgcttgcataaaaaagacgccaaaatacacaaa
cagttgagggaaatcagcctctcttcatgctggaaccttgtaccctgcagttggaggact
acacatttctgcagaaaggccacctcagggttgccctgttag
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integrated database retrieval system
