Chelonoidis abingdonii (Abingdon island giant tortoise): 116835071
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Entry
116835071 CDS
T07367
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116835071 (DENND4C)
Membrane trafficking [BR:
cabi04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116835071 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
116835071
NCBI-ProteinID:
XP_032653427
Ensembl:
ENSCABG00000016192
UniProt:
A0A8C0HBT1
LinkDB
All DBs
Position
Unknown
AA seq
1951 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTSTPLDQEVNRLETKSAGPKAPITDLAVIIKSAGETVPEG
YTCVEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDVGVLYEGKERVILGCEVIQA
TPYGRCANVNNSSATSQRIFITYRRAPPVRPQNSLAVTDICVIVTSKGETPPHTFCKVDK
NLNCGMWGSSVYLCYKKSMPASNSIAYKAGLIFRYPEDDYESFPLSESVPLFCLPMGATI
ECWDPQTKYPLPVFSTFVLTGSSAEKVYGAAIQFYEPYSRELLTEKQCMQLGLLTAVERK
VVTSKSINSNTCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPFPS
PQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKILL
HSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAAVLSAPVPFIVGVDSRYFDLYDP
PQDVVCIDLDTNMVYLSDDKKSVNWKQLPKKPCKSLLNTLRKLHPQLASVHRKTQDGSAV
EMTPIEADFSWQKKMTELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNETTAADSLFD
LQGFLKSRDRAYTKFYMLLTKTQIFSRFIEECSFVSDKDTSLAFFDDCIEKLFPDKGTEK
GEKVDIDSAEDTRLIELDESQKSEHTVFIMPLEPPPDDGQARAPKYSYKNFPRLDFELFD
RPQELKLSFNRHPAGGNISNSPALMAKRTKQEIKTAHKLAKKYYTNPPLWAKCLFSHCYS
LWFICLPAYIRVSHPKVRALQQAYDILIKMRKTDVEPLDEVCYRVLMQLCGLCGHPVQAV
RLLFEMKNAGVQPNAITYGYYNKAVLESHWPSSNRSGIFLWTKVQNVVRGVAQFRQCLKK
ATGSSQVSVISAPRNATGGSDGDTVSHGSVDSSNDANSGEHTLFVRDLVRLDSIDNHSST
GGQSDQGYGSKDELIRDDGDNLLAAETLAEKDSSCKMKDLTGEVGGISEKHQQSAEPHSS
ADPPAWGSSIVKVPSGIFDSTGRKNSSGTASSPLFITQDPVEDSVFNDASPKKTGEKGQK
RQKLFSERSCSFSTESRAGMLLKKGSLDLSSSEIAVMMGADAKILTAALSGAKTSPPHTS
KFSSFDSMGDQQVSGLSGTRTHVSEGAQELELKSSPVEEPEEGQVHIENGGEDSGARAEN
VHAKLLDGNQPPNQKTDARDAVTKRNSFYGVIKPIEREDVEVGLDPLSLLATESIEPKPS
DPEEKIVSPVVPRNLADEIESYMNLKSPLGSKSSSMELHKQESREAAASKTLSLSQERRS
SLPSDSVPPAPEKSENRKSPLVSRSKTFTGRLKQQTHSRVQKERPPSLMVLGRSSQHGSL
GSVVTSLSNLKLDNILSGPKIDVLKSGMKQAANVASRMWDSVTSQYNYSDDEVETHRPDF
TFTPGFEDHILGDSLSPKPGIPGLVTSELTQSTTSLGSSNSSGDVGKQHYTTGEVSFPRS
MKGLDSEKSEHGSSHNTSLSSIFQNCAMEVLMSSCSQCRVCGALVYDEEIMAGWAADDSN
LNTTCPFCKNTFLPLLNVEFKDLRGSASFFLKPSTSGDSLHSGNIPLTADPLEQKPVSNP
AVADLISFSDHLKPNQTIPEETSSATGQSDVPEEQSEGPRAMKTSVINSSKRGASLTRSH
SVGGPLQNIDLSHRPSHGISTVSLPNSLQEVVDPLGKRPNPLPLSVPYLSPLVLRKELES
LLENEGEQVIHTSTFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNDGVQLPLSSL
SQDSKLVYIQLLWDNINLHQEPGEPLYITWRNLNSVEKKSSIASEDQQATSTLVENIKLS
IQNNNVVEPIHLLLQKVKPDIKRQRSFYREILFLSLVSLGRENIDIEAFDSEYRLAYKSL
TTEVLEKMQKIDAPPSSSVEWCRKCFGAPVI
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccaagagtggccgactactttgtagtggcaggactcactgat
acttcgacccctctggaccaggaagtaaaccgcttggaaacaaagtcagctggtccaaag
gctccaattacagacctagctgtcatcatcaagtcagctggtgaaacggtgcctgagggt
tacacctgtgttgaagcgacccccacagcccttcaagccaacttgaactatgggagtctt
aaaagtccagagctttttctttgctacaagaggggccgggacaaaccaccacttactgat
gttggagttctatatgaagggaaggaacgtgtaattttaggctgtgaggtgatccaagct
actccctacggtcgatgtgccaatgttaacaacagttcagctacttcccaacgaatcttt
attacttatcgaagggctcctccagtacggcctcagaattccttggctgtaaccgatatc
tgtgttattgttaccagcaaaggagaaacacctccccatacattctgcaaagttgataag
aacttaaattgtggcatgtgggggtccagtgtgtacctctgttataagaagtctatgccg
gcttctaactcaatagcatataaagctggtttaattttcagatatccagaggatgattat
gagtcattcccattgtcagaatctgtacctcttttctgccttcctatgggagccactatt
gaatgctgggatcctcaaaccaaatacccactaccagtgttttcaacgtttgtcctgact
ggttcttctgcagaaaaggtgtatggtgctgctattcaattttatgagccttattcccgg
gagctgctaacagaaaagcagtgtatgcagctgggtctcctgacagctgtggagagaaaa
gtggttacttccaaatccatcaattccaacacgtgcatctgccttctctctcactggcct
ttcttcgaagcctttcgaaaatttcttatgttcatctacaagctctctgtctctgggcct
catcctcttccaattgaaaagcacatatcccatttcatgcataatatacctttcccttca
cctcaaagaccaagaatccttgtacagctttctgcccatgatgcattaatattgtctcaa
ccagtttctacacccttgccactcagtggagcaaacttcagtactttgctgatgaatctt
ggaccagaaaactgtgccactttgttactctttgtattgctagagggcaagatcctgctg
cactctctgagaccagctgtactgactggagtagctgaagctgtagtcgctatgatattt
ccatttcaatggcagtgtccgtacatccctctgtgtcctttgtctctggcagcagtgctc
agtgctcctgttccatttatagttggagttgattcacgatactttgatctgtatgatcca
ccacaggatgttgtttgcattgacttagacacaaacatggtatacctatcggatgataag
aagagcgtgaactggaaacagcttcctaagaagccctgcaaaagtctactcaacacctta
aggaaattgcatccacagctggcgtcggttcacagaaagacccaagacggctctgcggtg
gagatgacgcctatagaggcagatttctcctggcagaagaagatgacagaacttgagatg
gagatccaagaggcttttctacgcttcatggcgtctattttaaaggggtacagaacattc
ctcaagccaattacccaggcaccttcaaatgaaactactgctgctgattccttgtttgac
cttcaaggatttttaaaaagtagggaccgtgcctacacaaagttctacatgcttctaacc
aaaacacagatatttagccgcttcatagaagagtgcagttttgtgagtgacaaggatacc
agcttggcattttttgatgactgcatagaaaagctttttcctgataaaggaacagaaaag
ggagagaaggttgatatagattctgcagaagatacacggttaattgagcttgatgagtca
cagaagagtgaacacacagtgtttataatgccactagaacctccccctgatgatggacag
gcccgagcacccaagtacagctataaaaacttcccaagactagattttgagctcttcgac
aggccacaggagctcaagctttcgttcaacaggcacccagctggaggtaacatttcaaat
agtccagcactcatggcaaagaggacaaaacaggagataaaaacggcccataaattagcc
aagaagtattacacaaacccaccactgtgggctaagtgcctctttagtcactgttatagt
ctatggttcatttgtctgccagcctacatcagagtttcccatcccaaagtcagagcactg
caacaggcatatgacattcttattaaaatgaggaaaaccgacgtggaaccactagatgag
gtgtgctatagagttctaatgcagctctgtggactttgtggtcatcctgttcaggctgtg
agactcctgtttgaaatgaaaaatgctggagtacagccgaatgcaatcacctatggttat
tacaacaaggcagttttggagagtcattggcctagcagtaatcgcagtggtatctttctg
tggacgaaggtacagaatgtggtccgtggtgtagcacaatttaggcaatgcctaaaaaaa
gcaacagggagctcacaggtgtctgtgatatcagctcctcggaatgccacgggtggaagt
gatggggacacggtgagccatggtagcgtggatagttctaatgatgctaacagtggggag
cacacactcttcgtcagagacttagtcaggcttgattccattgataatcactctagcaca
gggggtcagtcagaccaaggctatggatccaaggatgagctcataagggatgatggagat
aatcttcttgcagctgagacgctagcagaaaaagattcttcttgtaaaatgaaagatcta
acaggagaggttggtggtattagtgaaaagcatcagcagagtgcagaacctcatagttca
gcagacccacctgcttggggaagcagtattgtgaaagttccatctggcatttttgatagt
actggcaggaaaaacagcagtggaactgcatctagcccactctttataactcaggatccg
gttgaagattcagtctttaatgatgcttctcccaagaaaacaggtgaaaaagggcagaag
agacaaaagctcttttcagagaggagctgcagttttagcactgaaagcagagcaggtatg
ctgctgaagaaaggcagtttggacttgagctctagtgaaatagcagtaatgatgggagca
gatgccaagatcctcacagcagctttatccggggctaaaacttcaccacctcacactagt
aaattcagtagctttgacagtatgggtgaccagcaggtctctgggctgagtggcaccagg
actcatgtgagcgaaggtgctcaggaactagagcttaagtcttcaccagtggaggagcct
gaggaagggcaagtgcacattgagaatggaggtgaggacagtggagccagagctgagaat
gttcatgccaaacttctggatggtaatcagcccccaaaccagaaaacagatgccagagat
gcagtaactaaaaggaatagtttctatggagtgattaaacctattgaaagggaagatgtt
gaagtgggcttggaccctttatctttgctggctactgagagtatagaaccaaaaccctca
gatcctgaagaaaagattgtatcaccagttgtaccacgtaatctggcggatgaaatagaa
agctatatgaatctaaagagccccctgggtagcaagtcttccagcatggagcttcacaag
caagagagcagagaagcagcagcctctaagacacttagtctctcccaagagaggagatca
agcttaccttcagattctgtcccaccagccccagagaagagtgaaaatcggaaaagtcct
ttagtttccaggtctaaaacctttacggggcgactaaagcaacagacccattcacgagtc
caaaaagagcggcctccatcactaatggtgttgggtcgctcttcgcagcatggctcattg
ggctctgtggtaacaagtttatccaatctgaaactagacaatatactgtctggaccgaaa
atagatgttctgaagtctggaatgaaacaagcagctaatgtagccagtaggatgtgggac
tctgtaacctcacaatataactactcggatgatgaggtagaaacccatcgaccagacttc
acctttactcctggttttgaagatcatattttaggagacagtctgtcaccaaaaccagga
atccccgggttggtaaccagtgaactcacacaaagtactactagtcttggcagcagcaac
agcagtggagatgtagggaaacagcactacacaacaggtgaggtttcgttcccaagaagt
atgaaaggtctggattctgagaagtcagaacatggttcctcccacaataccagtttgtcc
agcatcttccagaactgtgcaatggaggtcttgatgtcaagctgttctcagtgcagagtt
tgtggagcattggtttatgatgaagaaattatggctggatgggctgcagatgactctaac
ttaaacaccacatgtccattttgtaaaaataccttcttacctcttcttaatgtggagttt
aaagacttgcgtggatctgcgagcttttttctgaaaccaagtacatctggagatagttta
catagtggaaacattccattaaccgctgatcctctggagcagaaacctgtgtccaatcct
gctgttgctgatttgatcagtttttcagatcacctaaagcccaaccagaccatacctgaa
gaaaccagctctgcaactgggcaaagtgatgtgccagaagaacagagtgagggccccagg
gctatgaagacgtctgtcatcaattcatcaaaacgaggagcatctttgactcggagccac
agtgtcggaggccctttgcaaaatattgatctctcacacagaccatctcatgggatttca
acagttagtcttccaaatagcttgcaagaagttgtggatcctttagggaaaaggcccaat
cctctccctctgtctgtgccctacttgagccctctggtgctacgtaaagagcttgaatcc
ttgttagagaatgaaggggaacaagtgattcacacatccacatttatcaaccaacatccc
atcattttctggaacctagtttggtatttccggcgcttggatctacctagcaacttgcca
ggactcattttgacatcagaacactgtaatgacggggtccagcttccgttgtcatctctg
tctcaagacagtaagttagtatacatccagctactgtgggacaacatcaaccttcaccaa
gagcctggagagcctctatatataacttggagaaatctcaattcagtggagaagaaatca
tccatagcttcagaagatcagcaggcaacaagcactttagtggagaacatcaaactgagc
attcaaaacaacaatgttgttgaacccatccacctccttctgcagaaagttaaaccagac
atcaaacgacaaaggagtttttatagagaaatccttttcctgtctttggtgtcgcttggg
agagagaacattgatattgaggcctttgacagtgagtacagacttgcatataaaagtcta
acaacagaggtgcttgagaagatgcagaaaatagatgcgccgccgagcagcagtgtggag
tggtgtaggaagtgctttggagcacctgtcatataa
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integrated database retrieval system
