Chelonoidis abingdonii (Abingdon island giant tortoise): 116835175
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Entry
116835175 CDS
T07367
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116835175 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116835175 (EXOSC2)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116835175 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
116835175 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
116835175
NCBI-ProteinID:
XP_032653648
Ensembl:
ENSCABG00000004748
UniProt:
A0A8C0GLD0
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MAAIEVRLPVARKLVVQSLAQGSDKHLVAPGDTITTDTGYMRGHGTYMGDEKLVASVAGA
VERVNKLICVKALKTRYNGEVGDIVVGRVTEVQQKRWKVETNARLDSVLLLSSMNLPGGE
LRRRSAEDELAMRDYLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDEEAGGFVTNLEPVSLHDREVISRLRN
CILALVAQKLMLYDTSIVYCYEASLPHQIKDILKPEVMQEIVLETRQRLLGLEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaatagaggtccggctgccggtggcccgcaagctggtggttcagagcctggcg
caggggagcgacaagcacttggtggctccgggggacacgatcaccacagacacaggttac
atgaggggccatggtacatatatgggagatgagaaacttgtagcgtcagtagcaggtgct
gtggagagagtgaacaaactgatctgtgtcaaagctctgaaaaccaggtataatggcgaa
gttggtgacattgtggttgggagagtaacagaggttcagcagaaacgatggaaggtggag
accaacgccaggctggattcagtcttgcttctctcatccatgaacctgccaggaggggag
ctgaggaggagatcagcagaagatgagcttgcaatgagggactatctacaggaaggggat
cttatcagcgcagaagtccaggcagtattttctgatggggctgtatcactgcacacacgg
agtctgaaatacgggaagcttggccagggtgtgcttgttcaggtctctccctccctcgtg
aaacgccagaagactcacttccatgatctgccctgtggcgcctctgtgatccttggcaac
aacggcttcatctggatctacccaacgcccgagcagaaggatgaagaggcagggggcttt
gtcaccaatctggagccagtctccttacatgaccgggaggtaatctcacgactccggaac
tgcatcctggctctggttgctcagaagctgatgctctacgacaccagcattgtgtactgc
tatgaggcctcccttccccatcagatcaaggacattctcaaaccagaagtgatgcaggaa
attgtgctggagacccggcagaggttgttggggctggagggatga
DBGET
integrated database retrieval system
