Chelonoidis abingdonii (Abingdon island giant tortoise): 116835361
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Entry
116835361 CDS
T07367
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabi02000
]
116835361 (TMC1)
03037 Cilium and associated proteins [BR:
cabi03037
]
116835361 (TMC1)
Transporters [BR:
cabi02000
]
Other transporters
Pores ion channels [TC:
1
]
116835361 (TMC1)
Cilium and associated proteins [BR:
cabi03037
]
Other cilia and associated proteins
Stereociliary proteins
116835361 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
Na_K-ATPase
COX16
Motif
Other DBs
NCBI-GeneID:
116835361
NCBI-ProteinID:
XP_032654045
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MSYRCMQHIFLEMSVFVIDALNGNVMIFVKCRSSYCQQQKHNMISFIVVIEVDNEEGSAA
ESEDDDSKIATVYHTDNINSVRVCVRELLVLIHDINFLFLSVPPTPHHDCEDEEESENEK
KITAKTRRGNARGRARKDSEEEEEMRTAGQRRQRNRRAQRKQAGNEDSDSDGESRKNKKN
RANQISKQQEPSEDGEDDNKGGRKGRGKNETKQEKNPDEKGKKEKDNKKKKDKKKKVSSS
SDSDSEEEPITEEELAKLKEEVEEKKKLIATLRNKPWQMKKKLDVLKEAQLFVEKFEGAL
GKGKGKKFYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRW
MYGINMILFGLTFGLVMVPEVLMGKPYGTLPRKTVPRAEERTAMNFATLWDFSGLAQYSV
LFYGYYNNQRTIGWLKFRMPLSYFLVGVGTIAYSYMVVIRTMARNANEEGGGDDTSFNFS
WKMFTSWDYLIGNPETADNKFASITTSFKEAIVEEQENRKEENIHLTRFLRVLANFLALC
TLAGSGYLIYFVVRRSQKFALEGLDNYGWWERNEVNMVMSLLGMFCPTLFDVISSLENYH
PRIALRWQLGRIFALFLGNLYTFIIALMDEINLKLEEEKIVKYNMTIWEASLYNGTIPEN
ATAPPIQVDPADVPRGPCWETMVGQEFVRLTISDTMTTYITIIIGDFLRAVFVRFFNYCW
CWDLEYGFPSYSEFDISGNVLGLIFNQGMIWMGSFYAPGLPAINMLRLHTSMYLQCWAVM
CCNVPHERVFKASRSNNFYMAMLLFILFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVI
SETLENDFPSWFGKVFSYASNPGLILPFILLMVLSIYYLNATSKSYKEANLDLKKKLQSQ
AEENKKRNKQKAQQAREMEENSLETKPKQQGSKQDSAADQGTQKGRGDKENKKKTSHQQE
GSPSQQHGPGPNAHYTSHGRGGSLAPPPHIAVTQPPVPRGYGMPGYPPRNPRFEGFPGGH
PRMPRGTPNYR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccgctgcatgcaacatatctttttagagatgtctgtcttcgtcattgacgct
ctcaatggcaatgtaatgatctttgtcaaatgtagatccagttactgccagcaacagaag
cacaatatgatttctttcatagtggtcattgaagttgacaatgaagaaggcagcgcagct
gaaagcgaagatgatgacagcaaaatagctacagtatatcatacggataacataaattct
gtacgtgtgtgtgtgagagaattgctggtactgatacacgatattaactttttgtttttg
tctgtccctcccaccccccatcatgattgtgaagatgaagaagaatctgaaaacgagaag
aaaataactgccaaaaccagaagaggaaatgccagagggagagccagaaaagattcggag
gaggaagaggagatgaggacagctgggcaacgcagacagagaaacaggagagcacagagg
aaacaggctgggaatgaggacagtgattctgatggggaatcccgcaaaaacaagaagaac
agggcaaatcagatatccaagcagcaggagcccagtgaggatggagaagacgataataaa
gggggcagaaaaggaagaggcaaaaatgagaccaaacaggaaaaaaatcctgacgagaaa
gggaaaaaggagaaggacaacaagaaaaagaaggataaaaagaagaaagtttcctcaagc
tctgactccgactctgaagaggagccaattacggaggaggaattggccaagctgaaggaa
gaggtagaagagaaaaagaaattaattgccacgttacgaaacaaaccatggcagatgaaa
aagaaactagacgtcctgaaggaagcccagctttttgtagaaaaatttgaaggtgcactt
ggaaaaggaaaagggaaaaagttttatgcgtacaaagtgatgatgacaaagaaatggatg
aaatttcaacgagattttgagaattttaaaacagcctgcataccatgggaaatgaaaatc
aaagagattgaaagtcattttggctcttcagtagcttcttatttcatattcttgcgctgg
atgtatggaataaatatgattctctttggactgacgtttggccttgtaatggtgcctgag
gtgctgatggggaaaccatatggcacattacctagaaaaactgtcccgagagctgaagaa
aggaccgctatgaattttgcaactttgtgggactttagtggccttgcacagtattctgtg
ctcttttatggctattacaacaaccagagaacaattggatggctgaagttcaggatgcct
ctttcctatttccttgtgggagttgggaccattgcctatagctacatggttgtcatccga
acaatggcaaggaatgcaaacgaggaaggtggtggggatgatacaagttttaatttcagc
tggaaaatgttcactagctgggattacctgattggcaatcctgaaacagcagataataag
tttgcctcaatcacaacaagctttaaggaagctattgtggaggagcaggagaaccgaaaa
gaagaaaacattcacctaacacgattcctgagagttcttgctaacttcctggccctgtgc
acactggccgggagtggttacctcatctattttgttgtgaggagatcccagaagtttgcc
ctggagggcctggataactatggctggtgggagagaaatgaagtgaacatggtcatgtct
ctcttgggaatgttctgtccaactttatttgatgtaatcagttctctggaaaattaccac
cctcgaatagctctgagatggcagctggggcgcatctttgctctcttcttgggcaatcta
tacacattcatcattgccctgatggatgagatcaatctcaagctggaagaagagaagata
gtgaagtataacatgacaatatgggaagccagcctctacaatggtacgataccagaaaat
gccactgctcctccaatacaggtggatcctgcagatgtccctagagggccatgttgggaa
acaatggtagggcaggaatttgtgcgactgacgatctctgacactatgacaacatacatc
acaattataattggggatttcctgagagccgtctttgtcaggtttttcaattactgctgg
tgctgggacttggagtatggatttccttcctattcagagtttgatataagtggaaatgtg
ctgggactgatctttaaccaaggcatgatctggatgggttctttttatgctccaggcctg
ccagctatcaatatgctccgtctccacacctcgatgtatcttcagtgctgggctgtgatg
tgctgcaatgtcccccacgagagggtcttcaaagcctctagatccaataacttctacatg
gccatgctgctctttattctcttcctctccactctgcctgctgtgtacactattgtctct
atcccaccatcctttgactgcggcccattcagtgggaaaactagaatgtttgaggtcatt
tcagaaaccttagagaatgacttcccttcctggtttgggaaagtatttagttatgcttct
aaccctggactgatcttgcccttcatattgcttatggtattgagtatctattatctcaat
gctacttcgaaatcctacaaggaagctaacttggatctcaaaaagaagctacaaagtcaa
gctgaggaaaacaaaaagagaaacaaacaaaaagcacaacaggcacgggagatggaagaa
aactcccttgagactaaacccaagcagcaaggaagcaaacaagactccgcagcagatcaa
ggtacccaaaaaggacgaggtgacaaagagaataagaaaaaaaccagccaccaacaggaa
ggaagcccctctcagcagcacggccctggcccaaatgctcattatacctcacatggcaga
ggaggaagccttgctccgcccccacacatagctgtgactcaaccaccagtgccaagagga
tatggcatgcctggctacccccccagaaatccacgctttgaaggttttcctggaggacac
ccaagaatgccacggggcactcctaactatagataa
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