Chelonoidis abingdonii (Abingdon island giant tortoise): 116835737
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Entry
116835737 CDS
T07367
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03008
Ribosome biogenesis in eukaryotes
cabi03013
Nucleocytoplasmic transport
cabi03015
mRNA surveillance pathway
cabi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116835737 (NXF1)
03015 mRNA surveillance pathway
116835737 (NXF1)
03008 Ribosome biogenesis in eukaryotes
116835737 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116835737 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116835737 (NXF1)
03009 Ribosome biogenesis [BR:
cabi03009
]
116835737 (NXF1)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116835737 (NXF1)
mRNA cycle factors
Stress granule specific factors
116835737 (NXF1)
Ribosome biogenesis [BR:
cabi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
116835737 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_8
LRR_9
Luteo_coat
UBA_4
Motif
Other DBs
NCBI-GeneID:
116835737
NCBI-ProteinID:
XP_032654733
Ensembl:
ENSCABG00000021795
UniProt:
A0A8C0JB71
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MLLLLLCTEHDDRVGNAGGGGGFAGRRRKGRGPFRGKMYSEGNHRSWSRGVAGPSPSGQL
EEGDGDVPMSDAHDSLRTRYTPYGSRLNRRGDDWHGRGRGGATNIHVTVKRDLTPQDRSD
SASRNSSSRRRWYKVTIPYGKKYDKSWLLSSLQNLSSVPFTPVEFHYDQSRAYFYIEDMA
TANALKQLSRKITDRDNYKVVLIVNHSSPPQSVQKELKPEEIEQLKLTMSKRYDGSQQAL
DLKSLRTDPDLVAQNIDVVLNRRNCMQAVLQIIEENIPELLSLNLTSNKLYQLDDLAELA
QKATNLKILNLTCNELKSECELDKVKGLKLEELWLDGNPLCNNFRDQSSYVSSIRLRFPK
LLRLDGHELPPPIVFDVETPTTLPPCKGSYFGSDDLKVLVLRFLQQYYSVYDSGDRQGLL
DAYHDGACCSLSIPFLSQNPSRSILSEYFKGSRNVKRLKDPSLRFKLLKHTRLNVVAFLN
ELPKTQHDINSFVVDVCAQTNTLLCFAVHGVFKEVDGKSRDMVRGFTRMFIAVPAGITGL
CIVNDQLFVRKANTEEIRKAFVMPAPTPSSSPVPTLSAEQQEMLQAFAMQSGMNVEWSQK
CLQDNDWDYSQAAQVFTQLKTEGKIPDVAFLK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcctgctcctttgcacagaacatgacgaccgtgtgggcaatgcaggtggtggt
gggggcttcgctgggaggaggaggaaaggtcggggtccgttccgaggcaagatgtacagt
gaggggaaccaccgctcgtggagccggggtgtagcaggtcccagcccttctggtcagctg
gaggagggcgacggagatgttcccatgagcgacgcccatgacagtcttcgaaccagatac
actccctatgggtcacggctgaacaggcgaggcgatgactggcacggccggggccgggga
ggtgctaccaacatccatgtcacagtgaaacgagacctcaccccccaagaccggagtgac
agtgccagccgcaacagcagcagccggaggagatggtacaaggtcacaattccctatgga
aagaagtatgacaagtcatggcttctgagctctctccagaacttgtccagtgtccctttt
actccagtggagttccactacgaccaaagccgggcctacttctatattgaggatatggca
acagccaatgcgctcaagcagctgtcccgcaagatcacagatcgagacaattacaaggtg
gtgctaattgtcaaccactcatctccaccccagtctgtccagaaggagctgaagccggag
gagattgaacagctgaagcttaccatgagtaagagatatgacgggtcccagcaggccctg
gacctgaagagccttcgcacggacccagacctggtggcacagaacattgatgtggtgctg
aaccggcggaactgcatgcaggctgtgctgcagatcattgaagagaacatcccggagctg
ctctcactgaatctcaccagcaacaagctgtaccagctagatgacttggcggagctggcc
cagaaagccaccaatctcaagatcctcaatctgacctgcaatgagctgaagtctgagtgt
gagctggacaaggtgaaggggctcaagctggaggaactgtggttggatggaaaccctctg
tgcaacaatttccgggaccagtccagctatgtcagctccatccgactgcggttcccgaag
cttctgcgcctggacggccacgagctcccccctcctattgtctttgacgtggaaacgccc
accaccctccccccctgcaagggcagctactttggctcggatgacctgaaggtactggtg
ctccgtttcctgcagcagtattactctgtatatgattctggtgacaggcaggggctgctg
gatgcctaccacgatggggcctgctgttccctcagcatccctttcctctcccagaacccc
tccaggagcatcctgagtgaatacttcaagggcagcaggaatgtgaagagactcaaggac
cctagcctgcgcttcaaattgctcaagcatacgaggctgaatgtggtggccttcctcaac
gagctgcccaagacccagcatgacattaactcctttgtggtggacgtttgtgcacagacg
aacaccctgctgtgctttgctgtccatggggtcttcaaggaagtggatggcaagtctcgg
gatatggtgagaggattcacccgcatgttcattgctgtgccagctggcatcacagggctg
tgcattgtgaacgaccaactgtttgtgcgcaaagcgaacacagaggagatccgcaaagcc
ttcgtgatgccagcacccacgccctcgtccagccccgtgcccacgctgtcagccgagcag
caggaaatgctacaggccttcgccatgcagtctggcatgaacgttgagtggtcccaaaag
tgcctccaggacaacgactgggactacagccaggcagcccaggttttcacccagctcaag
acggaggggaagatcccagacgtggcatttctcaagtga
DBGET
integrated database retrieval system
