Chelonoidis abingdonii (Abingdon island giant tortoise): 116836111
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Entry
116836111 CDS
T07367
Name
(RefSeq) rotatin-like isoform X1
KO
K16484
rotatin
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cabi03037
]
116836111
Cilium and associated proteins [BR:
cabi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116836111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
MRP-S27
INTS5_N
Motif
Other DBs
NCBI-GeneID:
116836111
NCBI-ProteinID:
XP_032655430
Ensembl:
ENSCABG00000012533
LinkDB
All DBs
Position
Unknown
AA seq
1549 aa
AA seq
DB search
MELAPLIRKLGHQLAEIRERALKNILCKLDHNLISYADLVQEQLLFLHLLEWFNFPIVPM
KEEILNLVNNLLKHPSAVRQLVGIGAVEFFSQLRHHMDPHLQTVIDGILDGLFLLPSEIP
ANYPAVSYQGQPLPSEDKPVLPQEEIFAGYFHQGRSNLQQMEIPPKRSVVNQAVKCLKFS
TFPWLTLTTTDRHVLSSNESSLRSNNHSLIWSTCELLQDVIMQDFPAEIFLQRPKIVQSL
LSLLKLAFGKDGKHRLALQAVSCLQQLCVFLRNRLNFHRDPGFFSTDQGTASQNSSMSYG
QEVRGPHHSQNPSPGSSSPRPSVIGRTGQRPRGDGQDWDAASSSGSSIQASANSRINLQS
PLDVGHIDLPDLESEDTLELQFQQLSLPQFCVFILEYAVPLLRTGSSRVTMQVLELLSED
VLLIGDAVSEDVWEDHSLFGLELKDKLLMVLGSLGETISYHKSNINSEQPELMLVHHRMA
FISISLFTMRLLQTLLPVEKASKVLPESLVTALFLLSLDMPFSLEYPNIHESVVAYLEQM
NSENYSIYKQAAEAVHSIECTCNFMMDVHKEGEKNFFELVELADQALNSLPYHQHFPMLQ
EIIHICLNIWKSAQANPLLQAESQKVLLHLLSHPLLNIKSEAYHCCLEIVKECLGIHNVR
TPASSACHGVHFLLHPKVLYEISAFGLQESKNEVNSAAKAILLYLLQGRLMMTALTWNKF
IEALYPIIPILQGYADTEETLGNCILSLSETASDKGEGILPRTTRLRAALRLLFSKKQLV
RSVALKHLTFHLMNEEGASLKRPLLHGSVFSSVPTLFVVERPIELKLDDTKESIFKEETV
EKLYGILTSDTIDLILRKSAAEQLAIIMQDTKMHAVVKKLGLIDKLFVYFTECVHRDGKI
MECIMLPCLTLLRKLVYADPVTRLSLAQQPSILLTLLRVSLIFRDDCAVLTESAALLCLL
LFDEVAGKEIWSDAVYSNCSNLPAFSLPVAIVRRYHLPIRVTAHHAVSPNSVVLLLSSDC
LILKPVSDMLKMAWNLSWYHGIDKLLQLVNYETEAQVFLDTLKLSSEDFLTLKITHTTSG
LQDCLNAVIQAVSHREVRAAVTRMSFYILNDKLALKFSTGSCRTTLKGMAWQTAFNRSQV
MYFRYEGEIYSYTVCLYQRFLQVLPASAEDEKLLVDVLSFLNKLLREQKKSLEAEHVKWI
LENSSSLLDLLVRPESQEQDETNDIQTAVRQQLQKELIGLFNMLLLCFTSVTNRKGLALT
DCFRTQLALKLLQCLRVTNAPHFYGLPSLERTLRGMVHVTAHPGWSSYSATAEPFTICMK
YLTGLLEVISSFYVEWGGNAMSFMGKGVTKSTVLCLLHLSHEMMAQAKNMDWVSLWFLPY
DKSEEQVPSRLGLAWLVPLWVDRDPEVRFTSLGIGSALTSLELGCIALADSCQNISGGLW
GTVINILLDQLECSMVRREAAFILQNLLVIPMPTEELKDCAWQGPCVHDEDSGLSHIGKP
ALQALLYHCHFYEHLNQMVNHCYLGRYTFDLNCSTGDSLMAEKNGINGK
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggagctggccccgctcatcaggaaactcggtcatcaacttgcagagataagagaacga
gctctcaagaatatattgtgtaaattagatcataatttgatttcatatgctgatcttgtc
caagaacagttgctttttctccatttgctggaatggttcaattttcctatagtaccgatg
aaagaggagatactaaatttggtgaacaacttgttaaagcatccttctgctgtccggcaa
ttggttgggattggtgcagtggaattcttttctcaacttcgtcatcatatggatccacat
ctgcagactgtaattgatgggatactagatgggctcttcctacttccttcagaaattcct
gccaattatccagcagtgtcttaccaaggacagcccttaccatcagaagacaaaccagtt
ttaccccaagaagaaatattcgctggatattttcaccaaggcagaagtaatttgcaacag
atggaaatccctcccaaaagatcagttgtaaatcaggcagtgaaatgtttgaagttttcc
acatttccttggttaacactgaccacgacggatagacatgttctttcatcaaatgaaagc
tctttgagaagtaataaccacagtttaatttggagtacatgtgagcttctacaggatgtt
attatgcaagatttccctgctgagattttccttcaaagaccaaagattgttcagagcctt
ctgtctctactaaagttggcttttggaaaagatggaaaacaccgcttagccttgcaggca
gtgtcatgcctgcaacagttgtgtgtcttcttaagaaataggcttaattttcacagagat
ccaggctttttctccactgaccaaggtacagcttctcagaattcttctatgtcctatggc
caagaagtaagaggacctcaccattcccagaatccatcacctggaagtagtagccctcga
ccatctgtgattggacgtactggtcagcgtcctagaggtgatggccaagactgggatgcg
gcgtcttccagtggaagcagtattcaagctagtgcaaactccagaataaatctacagtca
ccgctggatgtagggcacattgacttgccagacctggaaagtgaggatactttagagtta
cagttccaacagctcagccttcctcagttctgtgtgttcatcctggaatatgctgtacct
cttctaagaacaggcagtagtagagtgacaatgcaagttcttgaattactttctgaagat
gtgcttcttattggtgatgcagtatctgaagatgtttgggaggaccacagcctctttggg
ttagagttgaaagataagctgcttatggtcctgggttcacttggagaaaccatatcctac
cacaaaagtaacatcaactcagagcagcctgagctgatgttagtgcaccacagaatggcg
tttattagcatttcacttttcaccatgcgactgttgcaaacacttctccctgtagaaaag
gccagcaaagtgttaccagagagcttggtgacagctttatttcttctttccttggacatg
ccattctccttggaatatccaaatattcatgagtcggtggtagcctatttggagcagatg
aattctgagaactacagtatttataaacaagctgcagaggctgttcattcaattgagtgc
acctgtaactttatgatggatgtccataaggagggagaaaaaaatttctttgaactagtg
gaattggcagatcaggccctaaatagtcttccttatcatcagcactttcccatgcttcag
gaaatcatccacatttgcttgaatatctggaagtctgcccaggctaacccattgctgcag
gcggagagtcagaaggtgcttctccatctgttgtcccatcctctgctgaatataaaatct
gaagcttaccattgctgtctggaaattgttaaggaatgtttgggtatccataatgtcaga
acacctgcatcttcagcttgtcatggggttcactttcttcttcatccaaaagttttatat
gaaatctctgcatttggcctccaggagtccaaaaatgaggtgaactctgctgccaaggct
attctactgtatctcctgcaggggcgattgatgatgacagcactgacctggaacaagttt
attgaggccctctatcccatcattccaattttacagggttatgcagacacagaagagaca
ctgggtaactgcatcctcagtctaagcgaaacagcttctgacaaaggagaagggattctc
cctagaactactagattaagggctgctctacgacttctcttctcaaaaaagcagttagtc
cgttctgtggcactgaaacatctaacattccatctcatgaatgaagaaggggccagcctg
aagcgccctcttttgcatggtagtgttttctccagtgttcctaccttgtttgttgtggaa
agacctattgagctgaagctggatgatacaaaagagtcaatttttaaggaagagacagtg
gaaaaactatatggtattcttacttctgacaccattgatctaattttgagaaagtctgca
gcagagcagctagctataattatgcaagataccaaaatgcatgctgttgtgaaaaaactg
ggtctgatagataagttatttgtttactttactgaatgtgtacatcgggatggcaagatc
atggaatgtattatgttgccatgccttacacttctacgaaaacttgtatatgctgatcca
gttacacgcctatcattagcacagcagccttctatcctgctaacgttattgagagtttcc
ttgattttccgagatgactgtgctgttctgactgaaagtgcagcattgctttgccttctg
ttgtttgatgaagtagcaggaaaagaaatctggtccgatgctgtatacagtaattgttct
aacctacctgctttcagcttgcctgtagctattgtcagacggtatcacctccctatcaga
gtcactgctcatcatgcagttagtcctaactctgttgttttgctgttatcttctgactgc
ttgatcttgaaacctgtgtctgacatgcttaagatggcttggaatctgtcatggtatcat
gggattgataaactattgcaactggtgaactatgaaacagaagcacaagtatttttagac
acattaaagctatcctcagaggacttccttacgttgaagataacacacacaaccagtgga
ctgcaggattgtcttaatgcagtaattcaggccgtgtcccacagggaagttagagctgct
gtgactaggatgagtttttatattctaaatgacaagctggctttaaaatttagcactggc
tcttgcaggaccactttgaagggcatggcttggcaaacagcattcaacagatctcaagtc
atgtacttcagatatgaaggtgaaatctatagttatactgtttgtttgtaccaaaggttt
ctgcaagtacttccagcttctgcagaagatgagaagcttctggttgatgtcttaagtttt
ctaaacaagttgcttagggaacagaagaagagtttggaggcagaacatgtaaagtggatt
ctggagaactcaagctcactgttagaccttctggtacgacctgaatcccaggagcaggat
gaaacaaatgacatacagactgctgtcaggcaacaactgcagaaagaactgattggtctc
tttaacatgttgctactctgcttcacatcagttactaacagaaaaggcttggcacttact
gattgtttccgaacacagctggctctgaaactgctacagtgtttacgggtaacaaatgcg
ccccacttttatggattgccttctttggagagaacgttacgaggaatggtccatgtcact
gcacacccaggctggagttcatactcagcgacagctgagccattcacaatttgtatgaaa
tatttgacaggtcttcttgaggtcatctcatctttttatgttgaatggggaggaaatgct
atgtccttcatgggcaaaggtgtcacaaagagcacagtactttgcttgcttcacttgtct
catgaaatgatggctcaagccaaaaatatggactgggtgtctctctggttcttgccttac
gataaaagtgaagaacaagttccttctcggcttggtctggcatggctagttccattatgg
gtagatagagatcctgaggtaaggttcacctcccttggaatcggatcagctcttacatct
cttgaattaggatgcattgctttagcggacagctgtcagaacatttcaggagggttatgg
ggaacagtgataaacattcttctggaccaattggaatgtagcatggtacgcagagaggct
gcttttattcttcagaatcttcttgtaatcccaatgccaactgaagaactgaaagattgt
gcttggcaggggccttgtgtacatgatgaagattctggtctgtctcatataggaaaacct
gcccttcaggctctattatatcattgccacttctatgaacatttgaatcagatggtgaat
cactgttacttgggtcgatacacatttgatttgaattgttccacgggagacagcctcatg
gcagaaaaaaatgggataaatggtaagtga
DBGET
integrated database retrieval system
