Chelonoidis abingdonii (Abingdon island giant tortoise): 116836206
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Entry
116836206 CDS
T07367
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116836206 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116836206 (DMXL1)
Membrane trafficking [BR:
cabi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116836206 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
116836206 (DMXL1)
RAVE complex
116836206 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Vps41
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
116836206
NCBI-ProteinID:
XP_032655558
Ensembl:
ENSCABG00000013783
LinkDB
All DBs
Position
Unknown
AA seq
3090 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSLHGQPLTAYASGCDIVILGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGTMICIFEPVTVLKQKSNHPAGMYYYQWQKSGQILLDSIAHNIT
WDPTGTRLLTGSNCLRLWSNVNLENQSEDGNPERTDVSFGDWRCMWQCKTASQVYLMKFS
PDGEFFATAGKDDCLVKVWYNTDSWRSAVTPQSSSPQKQAQEVDFSFVYLAHPRSVNGFS
WRKTSKYMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLSCAGGYNHWTEPLNLTNNFKR
NASSKERMQNALELNLRPFRRGRRRSLALIAHTGYSPHQQDPHEVHRNTPLHANALCHFH
IAASINPATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSVEVFLQHLKKSFE
QHSSETSTEESNQLDGKSDEEAADSGEEQKGNQEKKELGSEKTIPNSGFVPLSSAIIDHE
IEILLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGD
ANSLCRSIVMYACTKNVDLAIQQGKQKPLGLTRSSSMLISSAHNKSTNSLKLSIFTPNVM
MISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHH
NALRSPDVDSTKQTNDTSNSGESPLRSQNRGTTSVTSQDPNAVYSELILWRVDPVGPLSF
SGGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYQAVID
AKRLLCELSNPEISKYVGEVFNIISQQSTARPGCIVELDAITELHGRKTQLLHVFQEDFI
LNNNEEKIPEKNNCLSDSGNLQNGFSEKFYLIVIEYTQNRSLLHMWNLHLKSVPVSVDEK
IDSNIDEAVSHHEELYSSSPDPEKIQSPFTQKYRACRANLQSTSRLTLSSEMVYSQELNL
PEGVEIISVKPSAGHLSSSSVYPVCHAPYLLATSCSDGKVRFWRCRVNPEAVISSMPEYT
VNSNVTYIWEEWPLLVEDGLLSSSTVNVPGRPIEVSCAHTNRLAVAYKQMTSKNSRCSQD
FMMHVSIFECESTGGSCWILEQTLHLDEISIMLDSAISIDSNLMAYNKQEVYLSNNERIL
PSTKHLVHLDWMSKEDGSHILTVGIGSKLYMFGQLVGNMHDQSSKEMSALPLWENAKVTS
FCRFVLLRCVDLVSSVEGSPPLPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQESVTSD
SYSGSTPSITSLMKQSQSAGSGLHPPKRTLTRSMTSLAQKLSGKRTAFDLSVEMEDSGLF
EAAHALCPTLPQYHPFQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINESEPNHDRRLR
SLTISASGSTARDPKTFNKTENTDYTEIDSVPPLPLYALLTADDDCSHFCLEKSNNQNNL
NKENSLPDENYEDLFQNSSLNTDDLTVFEADEDNTKPKIIDLSQYSPTYFGPEHAQVLSR
HLLHSSLPGLTRMEQMSLMALADTIATTSTDIGESRDRNQGGETLDECGLKFLLAVQLHT
FLTTSLPPVYRAQLLHQGLSTRHFAWAFHSVAEEELLNMLPAVQKGDPTWSELRAMGVGW
WVRNIHSLRRCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKETKMTQFFGN
NFTEDRWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLGDIQLALVISRL
YESEFEASSMYKSILQKKILGSAFPGKESSSNMHCDPFLRSMAFWILEDYSRALDTLIKQ
SAGNEEDENGASPSCDPAVFNFYNYLRTHPLLLRRHFGSSETSSTRICLTVENGLADKIN
LSERRLFFTTAHAHLKAGCPMLALEVLSKMPKVVKKSKPFCSNSSLMDTNKDFSPSSPIR
LETKEDKVSIVDWAQPVLNGLGSFSDCSSDKQSNSALSFDWSQPSLVFQDEPLELKWESD
KDEDSEDSSLVMKELKPLQKMTSEKLDETSSNYSESFSAVDDNYLLSPSEDVISAQLKFR
ACLKILTVELRTLSTGYEVDGGKLRYQLYHWLEREVVALQKTCDYSAEVEEVQPGIRVTV
DEVALSENTEELSDQSKAMLQRENFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVR
MELILLLQESQQEQSIQTLPSPLPEQNSIPLLFACTASAKTVVASPLLHLSNLTHDILHA
VINLDSPPHPDIQNNKIHVMHTLAASLSACIYQCLCGGHSYSSLQANQFTGTVYQTLLLT
QRHTLKTTSLDETVTPNTSPAQWPGITALIHLLNSAGEEAQPGLTVLLCEILTAVYLSLF
IHGLATHSSSELYRIVAHPFNDKMWSAVFGGGAHIPNRGQMQQTTKAGRHFSMPSPHQVV
VFSMECVGFSKSLTAISTHSPTKHAVSSSVDNGKKQQKSFMLSSKISPKESSQSASSSLV
EQESPSYREKFIPPELSIWDYFIAKPFLPASQSRVEYDSEESQGSDDEDEDFTSDLHLQE
HSNPNSYSWSLMRLAMVQLVLHRLKNFYPLAGHDLSELPVSSPLCHAILKTFQRWEQVLL
RRLEIHGGPPQNLISAHASEDALSAGPALLRHKALLEPTNTPFKSNSHVALSVKRLWQYL
VKQEEVQETFIRNIFTKKRCLNESLEDHSETIKNTMMEEPFFNKIEADLGYPGSKARIIH
KESDIITAFAVNKANRNCIAIASSHDIQELDVSGILATQIYTWVDDDTEVEAKGSDDFLV
IHARDDLANVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVLIKKAINNVRRMASHPTLP
YYLTGAQDGSVRMFEWGHSQQIACFRSGGNSRITRIRFNHQGNKFGIVDADGYICLYQTN
WKCCPLTGSTPKPYLTWQCHNKTANDFVFISSSSLIATAGQATDNRNICLWDTLVTPANS
LVHAFICHDSGATVLAYAPKHQLLISGGRKGFTCILDLRQKQQRQLFQSHDSPVKAIAVD
PAEEYFVTGSAEGNIKVWSLSTFNLLHTFINEHARQSIFRNIGTGVMQIETGPANHIFSC
GADGTVKMRILPDQFSPVNEVLKNEVKFML
NT seq
9273 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccaggtgctgacgggcgccgtgaaccccggggacaactgcttttccgtg
gggagcctccacggccagccgctcacggcttatgcatcaggatgtgatatcgttatattg
gggactgattttgaaagattacaaataatccctggagcaaaacatgggaatattcaagtg
ggatgtgtggactgctcaatgcagcaaggaaagattgcagcttcttatggaaccatgatt
tgtatttttgaaccagttactgtcctgaaacagaagagcaatcatcctgctgggatgtat
tattaccagtggcagaagagtggtcaaattttactggactccatagcacataatataaca
tgggatcccacaggcactcgtctcttgactggttccaactgtttgcggctttggtccaat
gttaatttggaaaaccagtctgaagatggcaatcctgaaagaacagatgttagctttggg
gactggaggtgtatgtggcaatgcaaaactgcttcccaagtttatctaatgaaattttca
ccagatggagaattcttcgctactgcaggaaaggatgactgtcttgtaaaagtgtggtat
aatactgatagttggcgatcagcagtaacacctcaaagttcaagtccacaaaaacaagca
caagaggttgatttttcatttgtttacttggcccatcctcgatctgtaaatggattttca
tggaggaagacaagcaaatacatgccacgtggtgctgtatgcaatgtactgctgacttgc
tgcaaggataatgtatgccgcctctgggcagagactttgttacccaatgatagtttatca
tgcgctggtggatacaaccattggactgaaccactgaacttaaccaataacttcaaaaga
aatgcttctagtaaggaacgaatgcaaaatgctttagagttaaatctaaggccctttcga
cgaggaaggagaaggtcacttgctctcatagcacatactggatattccccacatcagcaa
gatcctcatgaagttcataggaacactcctttgcatgcaaatgcactctgtcactttcat
attgctgccagcatcaacccagctacagacattcctctactcccttctatcacgtctctg
agtctcggtgagaatgaagagaaaagtgggccatttgtcgtgcactggctgaacaataaa
gaactacattttaccctctccgtggaagtatttttgcagcatcttaaaaagagctttgag
caacattcttcagagaccagcactgaagagtcaaatcagttggatggcaaatcagatgaa
gaagctgcagatagtggagaagagcagaaaggaaatcaagagaagaaagaactgggtagt
gagaaaactattccaaattctggctttgttcctttatcttctgctattattgatcatgag
attgaaatactgttgtctgagtggagcaaaaatgcggacatgctattcagtattcatccc
atggatggttcattgctggtatggcatgtggactggctggatgaatatcagcctggtatg
tttcgccaggtgcaggtgtcttttgtttcaagaattccagtagcatttccaacaggtgat
gcaaattctctttgcagaagtatagtgatgtatgcctgcaccaagaacgttgacctcgct
attcagcaaggcaaacagaagccccttggccttacacgttcctcatctatgcttatctct
tctgcccacaataaatcaactaacagtttaaaattaagtatcttcacccccaatgttatg
atgatttcaaaacatgcagatggatctttaaaccagtggctagttagttttgcagaggaa
tctgctttttctactgtgctcagtatttcacataaatctcgatattgtggtcaccgtttt
catcttaatgacttggcttgtcattcagtgttacctttgctgctgacaacttctcatcat
aatgctttgagatcaccagatgttgacagcacaaaacagacaaatgatacttcaaattct
ggagagtctcctttaagatctcagaatagaggcactacaagtgtaacgtcccaggatccc
aatgcagtttatagtgagcttattctttggcgagttgatccagttggtccattatccttt
tctggaggagtttctgaacttgcacgaattaattctctccatgtttcagctttttctaat
gtggcatggctgcctacacttatacccagttactgtcttggtgcatactgcaattctcca
agtgcttgctttgtggcaagtgatggacagtatctgagattatatcaggctgtaatagat
gctaaaaggcttttgtgtgagctatccaatcctgaaatttctaaatatgttggtgaagtt
tttaacatcataagtcaacagtctactgcaaggccagggtgcattgtggagttggatgct
attacagagcttcatggcagaaaaacacagttacttcatgtttttcaagaagacttcatt
ttgaataacaatgaggagaaaatacctgaaaagaacaactgtttatctgactctggaaac
ctgcaaaatggattctctgaaaaattttacttaatagtaattgaatacactcaaaaccgc
tcattattacacatgtggaacttacacttgaagtccgttccagtttcagtggatgaaaaa
atagactcaaatatagatgaagcagtgtcacatcatgaagagctatattcttcctctccg
gatccagagaagatccagtctcccttcacgcaaaaatatcgggcctgtagagcaaacctt
caaagtaccagtcgtctgactctgtcttcggaaatggtttatagtcaagagttgaattta
ccagaaggagtggaaataataagtgttaaaccatcagcaggacacttgagttcctcttcc
gtatatccagtttgtcatgctccttatctactggcaacttcttgctcagatggaaaagtt
aggttctggagatgcagagtgaatcctgaggcagtgatttcttctatgccagaatatact
gtaaatagtaatgttacgtatatatgggaagaatggccactacttgttgaggatggactt
cttagtagtagtactgtgaatgttccaggaaggccaatagaagttagttgtgcacataca
aatagattagctgtagcatacaagcagatgacatctaaaaatagtcgatgttctcaagat
ttcatgatgcatgttagtatttttgaatgtgaatctacaggaggatcatgttggattctg
gaacagactcttcatttagatgaaataagcattatgttggactctgccattagtattgac
agtaatttaatggcatacaataaacaagaagtttatttatctaataatgagaggattttg
cccagcacaaagcacttggttcacttagactggatgtctaaggaagatggatcacatatc
ctaacagtaggaattggatcaaagctttatatgtttggccagctggttgggaacatgcat
gaccaaagtagtaaggagatgtctgcattgccactgtgggaaaatgcaaaagttacatcc
ttttgtaggtttgtactgctacggtgcgtggacttagtttcttcagtagaaggatcgcct
cctttgccagtttctttatcttgggtacgtgatggcatccttgtagttgggatggattgt
gaaatgcatgtttattctcagtggcaatccccttcaaaacaagagtcagttacgagtgat
tcttacagtggaagcacaccatctatcactagcttaatgaaacaaagccagtcggctggt
tctggcctgcatccaccaaagcgaaccttaaccagatccatgacaagtcttgcacagaaa
cttagtggaaaaagaactgcatttgatctgtctgtggaaatggaagattctggtcttttt
gaagcagctcatgcattatgtccaactttaccacagtaccaccctttccagcttctagag
cttatggaccttggtaaagtacgtagagcaaaagccatcctgtctcatttggtgaaatgt
attgctggggaagttgttgctataaatgaatctgaacctaatcatgatcggcgacttaga
tctctcacaattagtgctagtggaagcactgcaagagaccccaagacattcaacaaaact
gagaatacagactatacagaaatagactctgttccaccacttcctttgtatgcattgctt
actgcagatgatgactgctcacatttttgtttagagaaatccaacaatcaaaataactta
aataaagaaaatagtttaccagatgaaaattatgaagatctttttcaaaactccagccta
aatacagatgatcttaccgtgtttgaagcagatgaagataatacaaagccaaagatcatt
gatctttctcagtacagcccaacttactttggaccagagcatgcccaagttctttctcgt
cacttgctgcattccagcttaccaggtctcaccaggatggagcaaatgtcattgatggcc
ttggcagatacaattgctactaccagtactgatattggagaaagcagagacagaaatcag
ggtggagaaacgcttgatgaatgcggcttaaaattccttctggctgttcagcttcacaca
tttctgacaacctcacttcctcctgtctatcgagcccagctgcttcaccaaggcttgtct
actcgtcactttgcgtgggcatttcattcagtagcagaagaagaactactgaacatgctc
cctgctgtgcagaaaggggatccgacttggtcagaactcagagctatgggtgtaggatgg
tgggttcggaatatccatagtttgcgcagatgcatagaaaaggtagccaaagcagctttt
caacgaaacaacgatccacttgatgcagctattttttaccttgcaatgaaaaagaaggct
gtgatttggggattatacaggtcccaaaaggaaactaagatgacacagttctttgggaac
aattttactgaagatagatggcgtaaagcagcattaaagaatgctttttctttattaggc
aaacaacgctttgaacattctgcagcatttttcttgttggctggtcacttgaaggatgca
gttgaggtctgccttgaaaaactgggtgacattcagctggctcttgtaatatcaaggctt
tatgagtcagaatttgaagcatctagtatgtataaatccatactgcagaagaaaattttg
ggaagtgcctttcctggtaaagaaagctcatcaaatatgcattgtgacccttttctacga
agtatggctttttggattttggaagattatagcagggctcttgatactctaattaagcaa
tctgctggaaatgaagaagatgaaaatggtgcttccccaagttgtgatcctgcagtgttc
aacttttataattatctaaggacacatcctctcctgctgagacgtcattttggctcttct
gaaacatcttcaacacgcatttgcctaactgtagaaaatggactggcagacaaaataaat
ttaagtgaaagaagattgtttttcactacagcacatgcacatttaaaagctggctgtccc
atgttggctctagaagtgttatcaaaaatgccaaaagtggtcaagaagtcaaagcctttt
tgttcaaattctagtttaatggacactaataaagatttttcaccttcttcaccaataagg
ttagagaccaaggaagataaagtttccattgttgattgggcacagccagtactaaatggt
ttgggatcattttcagattgttcatcagacaaacagtcaaactctgctctttcttttgat
tggagtcaaccaagtctagtattccaagatgaaccgttggagctaaagtgggaaagtgac
aaagatgaagacagtgaagattcttctcttgtaatgaaagagctgaaacctttgcagaag
atgacaagtgaaaagctagatgaaactagttctaactactcagagtctttcagtgcagtt
gatgacaattatcttttaagtccatcagaagatgtgatctcagcacagttgaagtttaga
gcatgcttgaagattctcacagtagagcttcgtacactatccactggttatgaggtagat
ggtgggaagctgcggtaccagctttaccattggcttgaaagagaagttgtagctcttcaa
aaaacctgtgactacagtgcagaagtagaggaggttcaacctggaattagagtgactgtt
gatgaagttgcattaagtgaaaacactgaagaattatctgaccaatcaaaagctatgctg
cagagagagaattttcagaaaaggcgacaatggcttctaaaataccagtcactcctgagg
atgtttcttagttactgtatacttcatggatctcatggtggggggttggcatccgtgagg
atggaactgattttgcttttacaagaatctcagcaggaacagtcaatacaaacacttcct
agtcctcttccagaacagaactctatacctctcctatttgcctgcacagccagtgccaaa
acagtggtggccagtccattattgcatctcagcaacctgactcatgatatattacatgca
gtaataaaccttgattcgccacctcacccagatatccagaacaataagatacatgtaatg
catactttagcagcatcactctctgcctgcatctaccagtgcctttgtggtggccacagc
tacagttcattacaagcaaaccagttcactggaacagtatatcagacactgctgcttacc
cagcgacatactctaaaaactacaagcttagatgaaactgtaactcccaatacatctcca
gctcaatggccaggaataacagctctgatacatcttttgaattctgccggtgaggaagcc
cagccaggactcacagttttactttgtgaaattctaacagcagtctatcttagtctcttc
attcatggtctagcaactcattccagcagtgaattgtatagaattgtggcccatcctttt
aacgacaaaatgtggtctgctgtctttggtggaggagctcatattcctaacagaggacag
atgcaacagacgacaaaagctggtaggcacttctctatgcctagcccacaccaggtagta
gtgttctctatggaatgcgtggggttttccaaatctcttactgccatcagtactcatagt
cctaccaaacatgcagtttcttcttctgtagacaatggtaagaagcaacaaaaaagtttt
atgctttcatcaaaaatctctccgaaagaaagttcacagtctgcttcatcatctttggta
gagcaagaatctccatcttacagggaaaagtttatccctcctgagcttagtatctgggac
tatttcatagcaaagccttttcttccagcctcacaaagtagagtggaatacgattcagag
gagagtcagggaagtgatgatgaggatgaggattttacatcagatttacaccttcaggag
cactctaatccaaattcgtacagttggtcactgatgcgattggctatggttcagctggtg
cttcataggttgaagaatttctaccccttggctgggcatgatctgtcagagcttccagtt
agttccccgctgtgccatgccattctgaagacatttcagcgctgggagcaagttcttctc
cgacgacttgagatacatggtggcccacctcagaatttaatttctgctcatgcttctgag
gatgcattatcggcaggtcctgcgctccttcgtcataaagctttgcttgaacctacaaac
actcctttcaaatctaacagccatgttgcactgtctgtgaagaggctttggcagtactta
gttaaacaagaggaagtccaggaaaccttcatcagaaatatatttacaaagaaaagatgc
ctaaatgagtcattagaggaccacagtgaaaccatcaaaaatactatgatggaggagccc
ttcttcaataagatagaagcagatctgggatatccaggaagtaaagcaaggattattcat
aaagaatctgacatcattactgcctttgcagtcaataaagcaaacagaaactgcattgca
atagcttccagccatgacattcaagaactagatgtttctgggattctagctacacaaatc
tacacctgggttgatgatgacacagaagtggaggctaaagggtctgatgacttcttggtt
atacatgctcgtgatgacctggcaaatgttcagggtactacaccttatacacacagcaat
cctggcaccccgatcaacatgccttggcttggtagtacacagactgggagaggtgcatct
gtgctgatcaagaaggctattaataatgtcagaagaatggcttcccatccaactctacct
tattacttgacgggtgctcaagatggtagcgtgagaatgtttgaatggggccattcacaa
caaatcgcatgtttccgctctggtggcaactcaaggataacacgaataagattcaatcac
caaggaaataagttcgggattgttgatgctgatggatatatatgtttatatcaaacaaac
tggaagtgttgcccacttactggaagcacacccaaaccatatctgacgtggcagtgtcat
aacaaaacagccaatgattttgttttcatcagttcctcctctttgatagccacagctgga
caggctactgataacagaaatatatgtttgtgggataccttagttacacctgcaaatagt
ttagtgcatgcttttatctgtcatgatagtggggcaactgtgctagcatatgctccaaaa
catcagcttttaatatcaggaggcagaaaagggtttacttgtatacttgatcttcgccaa
aagcaacaacgacagctattccagagtcatgattctcctgttaaagcaattgctgtggat
cctgcagaagaatactttgtaacaggatcagcagaaggcaatataaaggtatggagttta
tctacctttaatcttcttcacactttcatcaatgagcatgctcgacagtcaatcttcaga
aacattgggacaggggtcatgcagattgagacaggaccagcaaatcacatattctcctgt
ggagctgatggaacagtaaaaatgagaatcttgcctgatcaatttagcccagtaaatgaa
gtgttgaaaaatgaagtgaaatttatgctctga
DBGET
integrated database retrieval system
