Chelonoidis abingdonii (Abingdon island giant tortoise): 116836324
Help
Entry
116836324 CDS
T07367
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116836324 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116836324 (LMO7)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116836324 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
LIM
DUF6288
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116836324
NCBI-ProteinID:
XP_032655750
Ensembl:
ENSCABG00000018192
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MEGREDAEGSCDVAFAEAQRWVEAVTGKSFGTKDFRAALENGVLLCDLINKIKPGIIKKI
NRLSTPIAGLDNINVFLKACENIGLKEAQLFHPGDLQDLSSRVTVKSLLKMHLFCCCLVI
FQELGHMLANSQNKQEETNRRLKNVLITLYWLGRKAQNKSGYNGPRLNLKAFEKLLGQAL
TRALEESSSLKSSGRDSGYGDIWYIDRGEAFSPSTSHKRDDSFDSLDSFGSRSSTSFSSD
ITLKGSSEGCESDTDSELPYKMHDSGKDNMSYRRIAVVEPKPVTEFNRFLPSKSKQTAYI
PPPLRKKRIEKNEDNRRSWASPVFTEPDGTFSSERGKNPLASCQNSRAERGFTNPASVQM
IHEYESGSDSEDERRLPDVVMDDLAKRRFLIKKSSVSSAAPGHLYILHKDSPKSCLQQNY
PAGPLAAVLEPMSNQKKQRHLDPKEESKRKVNISSKFSSYSDDEEEKAVGIPNIEKDDLY
VRKLNSAVSNPMVSFDKFLPKFWTPEEELHWKNIKKGSSSKPWYKELQGFRVKSDSEDED
SANKQSNAKPTADYVGKSLSQIAEGGITYPSDQPSQFSLLQTLQKYSDDYLSSEMKTKID
PTSGPRVITCRKNIFFTPGCNQRETMNGDLYPDLENDDLFVRKTGAFHMNPIALQAFEYF
RKSSEQEPLLEGEIILQPREGQPVIPDLEKDDMTVRKVQTQKKGVPLSGAPDKYHPALFP
DPWSLPPEIQSKFLCLLDKTITTEDEKNGGRVLSPSLQQKKDDMLTRKIESWKVGSALQP
ISFTPGPCSEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEDGSKSLNDVSIDEPQVL
RQVRYEELQKIKSKLQEQDQQWQDDLAKWKNRRKSFTSDLQKKKEEREEIERRASESSER
NSKSLKEMQQDRENRDQGSYWDIQQKSERRRMHSSDDVFSEEKPPSRSSVAKDYLVEKDA
FKKNEASYAAQTNKENSQKPEIYATVETQIPSKSLLAEQSSVPLSTHPSVNAQMGSARVS
ASLPRNYQKTDTSRLTSVVTPRPFGVPSRGISSLPRSFTVDDAQKYNGEVDGAKRSQSLL
TSYSFSTLEAGPLLSADAMTSGGKEEKESIKITESPTLRASATSQYQDAVSPGLKSEYYT
HPDPITVASSAEIRSLPEPEVSVSQDQYSEMRISINQRPGNSRNFGFTTNWKPSGVFIQT
IEEGSTADLGQLQVDDEIIAVDGTRVSQMDHNQWEKAMANALETGNLVMDVRRYGKNDWG
KDQPSLPYVRHKILNLTSMATNIVGTPENRWIDATSGDQNSTNSSNVSAKRDFSYSLQNS
DTGAKVINGMKADLSSNEQKESEPISLKNLKRRSQFFEQGGSEPAVSDLPIPSVNAPSRW
TWDQEEERKRQEKWQKEQEQLLQEKYRREQEKLREEWLQAQQEAERESSKYLDEEPTALT
LNTVSVTAHAPPISSWRTNMGEDTDAPEGGRRHEWGEQQQNEEEKEMERQRLQEERRLQE
EKALYLEQKRKAQELELEREWKAKEQQYAEEQKRRAEAEEQKRRAEAEEQKRRAEKERER
SVQMPQYRRHYDHYEVSQNFEDPSGHFLADRNKSRSTSELDNYPRSRNGTNTKYLERSWN
VSDSQKGSQKERAPSSAEIERQHILQEMRKKTSLHTDNSWIRQRSSSVHKDPVNLQKNTM
KRGESLDNLDSARTSSWRHSPWTNQSSFSTSSGQDFGRSAVPLVSTSNRAYMRTPSSSVA
PPSASSGRSATSSHTFPSAPSSVPRAQSPTSASQSGAQQRNKSVSGKKICSYCNNVLGKG
AAMIIESLGLCYHLRCFKCAACARDLGGSHSGAEVRIRNNELFCNDCYVRFKTGQPTAM
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggaggggagagaagatgccgagggcagctgcgatgtagcttttgctgaagctcagaga
tgggtggaggcagtcactgggaaaagttttggaaccaaagattttcgagccgctttagaa
aatggagtcttgctgtgcgatttgattaacaagatcaaacctggcatcattaagaagatc
aatcgtctgtctactccaatagctggtttggataacataaatgtttttctgaaagcttgt
gaaaatattggattgaaagaagctcagctttttcatcctggtgatcttcaggatttgtcc
agtcgagttacggtcaaatctctgctgaagatgcatctcttctgctgctgtttggttatt
tttcaagagcttggacatatgctagccaactcacaaaacaagcaagaggagaccaataga
agactcaaaaacgttttgattacattatactggctggggaggaaagcacaaaacaagtct
ggttacaatggtccacgccttaaccttaaagcatttgagaaattactaggacaagctctg
accagggcccttgaagaatctagcagtctgaaaagcagtggcagggacagtgggtacggt
gatatttggtacattgaccgtggagaagcattttcaccttccactagccataaaagagac
gattctttcgatagcctggactcctttggttcaagatcctccacaagcttttcatcagat
ataaccttgaagggtagcagtgaaggttgtgaaagtgacacggactctgaactgccttac
aaaatgcatgattctggcaaagataacatgtcatatcgcaggattgctgtggttgaacca
aaacctgttacagagttcaatcggttcttacccagcaaaagtaaacagacagcatatatt
ccaccaccgctcaggaaaaaaaggatagagaagaatgaggacaacagaagaagctgggca
agtcctgtcttcactgagccagatggaacattttcaagtgaacgaggaaagaatccttta
gcttcctgtcagaatagcagagcagaacgtgggtttacaaatccagcttccgtgcagatg
atccatgagtatgaaagtggctctgattcagaagatgaaagaagactgcctgacgtggtt
atggatgatttagcaaaacgtagattcttaataaaaaagagctctgtgagttccgctgca
cctggacatctttacatcttgcacaaggactctcctaaatcttgtttgcaacaaaattat
ccagctggtccattagctgctgtgcttgaaccgatgagtaaccagaagaagcagaggcat
ttggaccctaaagaggaaagcaagcgaaaagttaacatttcttcaaaattctccagctat
tctgatgatgaggaagaaaaggcagtaggcatcccaaacattgaaaaagatgatctctat
gttcgcaaactaaattctgcagtttcaaacccaatggtttcttttgacaagtttctacct
aagttttggactccagaagaagaattgcactggaaaaacatcaaaaaaggatcctcttcc
aaaccatggtataaggagcttcagggattcagagtgaagtctgattctgaggatgaagat
tcagccaataaacaaagcaatgccaaaccgactgctgattatgtggggaaatcattgtcc
caaattgcagaaggaggaatcacgtacccctctgatcaacccagtcagttttcattactt
cagaccctccaaaaatactctgatgactacttgtcttcagaaatgaagaccaaaattgat
cctacttctggccctagggtcataacatgcagaaagaatattttttttacaccaggatgc
aaccagagggaaactatgaatggagacctatatccagacttggaaaatgatgatttgttt
gttcggaagactggggctttccacatgaatccaattgctctccaagcttttgaatacttt
agaaaatcctctgagcaagaacctcttctagagggtgaaataattctgcaacccagagaa
ggccaacctgttattccagacttagaaaaagatgacatgactgttcgtaaagtacaaaca
cagaaaaaaggggtgcctttgtcaggtgctccagacaaataccatcctgcactctttcct
gatccttggagcctcccaccagaaatccaatccaaatttctttgtttacttgacaagact
atcacaacagaagatgaaaaaaatggtggtagagtcttatcaccttctttgcagcagaag
aaggatgatatgctgactcgcaagattgaatcttggaaagtaggaagtgctctgcagcca
atcagttttactccaggtccatgcagcgaagaagactggaaaaaatgggaggctatcaga
gaggccagcaaagttagacacaagaaacgccagatggttgagagactgtttcaaaagctt
tctgatgaggatgggagcaagtctttgaatgatgtcagtatagacgagccccaagtgctg
cgccaggttcgttatgaagagctacagaaaataaaatccaagctacaggaacaagatcaa
cagtggcaagatgatctagcaaaatggaaaaatcgtcgaaaaagtttcacttcagatttg
caaaagaaaaaggaggagagagaagaaatcgaaaggagagcctctgagagttctgaaaga
aatagcaagtcactgaaagaaatgcagcaggacagggagaacagagatcaaggatcctat
tgggacatccagcaaaaaagtgaacgcagacgaatgcattcatcagatgatgtatttagt
gaagaaaaacctccttccagatcatcagtagcaaaagattaccttgttgaaaaagatgcc
tttaagaagaatgaagcatcatatgctgcgcaaactaacaaagagaattctcaaaagcca
gagatctatgcaacagttgaaactcaaattccatctaaaagcctattagcagaacagagc
tcagtccctttgtctactcacccttcggtgaatgcacaaatggggtcagctcgggtttca
gcttctctccccagaaattaccagaaaactgatacctctaggttaacatctgtggttaca
ccaagaccttttggtgtcccctcaagaggaatctcctcacttcccagatcatttacggtg
gacgatgcccagaaatataatggagaagtagatggagctaagagatctcaaagtttgctc
accagctattcattttcaacactggaagcaggaccacttctctctgcagatgcaatgaca
agtggtggcaaggaggaaaaggaaagcattaaaataacagagtctcctacactgagagcc
tctgctacatcccaataccaggatgcagtgtcccctggtcttaaatcagagtattatact
catcctgaccctattacagttgcatcttctgcagaaataagaagcctgccagagccagag
gtttcagtgtcacaggaccagtacagtgaaatgagaatcagtataaaccagagacctggt
aacagtcgcaactttgggttcaccacaaattggaaaccttctggggtttttatacaaaca
attgaagaaggtagcactgcagaccttggccagctgcaagtagatgatgaaatcattgct
gttgatggcacaagagtttcacaaatggaccataatcagtgggagaaagccatggccaat
gcactagaaactggaaacctggtcatggatgtcagacgatatggaaaaaatgattggggc
aaagaccagccttccctgccatatgtaaggcataaaatcctcaatctcaccagtatggct
accaacattgtaggtacacctgaaaatagatggattgatgcaacttctggagatcagaat
tctacaaactcgtcaaacgtatcagccaaaagagatttctcctacagccttcaaaattct
gatactggagcaaaagtgataaatggaatgaaagcagatctgagctctaatgaacaaaaa
gaatctgaacctatttctttgaaaaacttaaaaagacggtcacaattttttgaacaagga
ggctcagagcctgcagtgtctgatctcccaattccatctgttaatgctcctagtcgctgg
acttgggaccaagaagaagagagaaaacgacaggaaaaatggcagaaagaacaggaacag
ttacttcaggagaaatacagacgtgaacaggagaaattgcgtgaagaatggctacaagct
cagcaagaagcagaaagagagagttccaaatatttagatgaggagccgactgccctaacc
ttaaacacagtatcggtaactgcacatgcaccacctatttctagctggagaacaaacatg
ggagaagacactgatgctcctgaaggaggcagaagacatgaatggggggaacagcagcag
aatgaggaagagaaggaaatggaaaggcagagactccaggaggaaaggagacttcaagaa
gaaaaagccctgtatttggagcaaaaaaggaaagcccaagaactagagcttgaaagagag
tggaaagcaaaggaacaacagtatgctgaggagcagaagcggcgggcggaggccgaggag
cagaagcggcgggcggaggccgaggagcagaagcggcgggcagaaaaagaaagggagaga
tcagtgcagatgccccaataccgaagacattatgaccattatgaagtatctcaaaacttt
gaagatccatctggacactttcttgctgacagaaataaatccagatcgacttcagaactg
gataattaccccagaagcagaaatggtacaaacaccaaatatttggaaaggtcctggaat
gtcagtgattcacagaaggggtctcagaaagagcgtgccccatcttcagcagaaatagag
agacaacatatcctccaggaaatgaggaaaaaaacatcactacatactgacaacagctgg
attagacagcgtagttctagtgtgcataaggaccctgttaatctacagaagaatacaatg
aagagaggtgaatcgttagataatcttgattctgcaagaacaagttcatggagacattca
ccttggacgaatcaatcttccttttccacatcatctggtcaagattttggtcgctctgct
gttccactagtgtctacttcgaaccgagcttacatgcgtaccccctcctccagtgtagca
cctccttcagccagctctggaagatcagccacttcttcccacactttcccctcagcacct
tcttctgtaccgcgtgctcagtctcctacctctgcttcccaatcaggagcccagcagcgg
aacaagtcagtcagtgggaagaaaatatgttcatactgtaataacgttctgggcaaagga
gcagccatgatcatcgaatctcttggtctttgttatcatttacgttgttttaagtgcgca
gcttgtgcacgtgaccttggaggctcacactcaggagctgaagtcaggatccgaaacaat
gaactcttctgcaacgactgctatgtcagatttaaaactggacagccaaccgccatgtga
DBGET
integrated database retrieval system
