Chelonoidis abingdonii (Abingdon island giant tortoise): 116836374
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Entry
116836374 CDS
T07367
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cabi04054
]
116836374
Pattern recognition receptors [BR:
cabi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116836374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
PYRIN
NOD2_WH
FISNA
LRR_4
AAA_16
nSTAND3
Iron_permease
NB-ARC
NPHP3_N
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
116836374
NCBI-ProteinID:
XP_032655829
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MGNRSSRNLTTRMRSDLLIRTLDNLSQEEFKRFKDKLSHSDFEGKGNIPRGQLENADRID
TKNLLIQFYGEIAAVEVTTDVFTQINLRDAAAKLREEREKALGPQQTSERSANAYGVKYR
EHIKNEYSAMKDMNARLGENVKLNSRYTKLIITKEHRHEMQREHEIMALGRRHAEIMTEH
TTPITIGDLFESDDDGQSPQIVVLQGAAGIGKTLTARKIMLDWANEELYQSRFDYVFYIN
CREINFDREQRSVEDLILRNCPDHNAPTKEILMTPEKLLFIIDGFDELRFSFNQPTSNLC
SDPCEKQSVDIILSSLFRKKVLLKSYLLITTRPIALEKLGRCLKDERYAEILGFSENERK
EYFYKFFEKEEQASKAFNVVRDNEMLFTMCFVPIACWIICTVLKQQMEAGEDLAQTSTTI
TGVYMLYLFSLLEGHSSNSKQQVQCNLKELCSLAADGIWRKNILFEEEDVKKHGLDKPDS
LFLNENVFQKGIGCERVYSFIHLSFQEFFAALFYVLEQEETVKKSATAIQPVEKLFEKCG
KSRNYLMLTVRFLFGLLNKKRMEEMEKNLSCKFSPKVKNNLLTWVKEKPFSLLFNYDKLP
SDKETMFFYLDYFYCLYEIEETEFVQSAMNHFTELKLTHHTFTKMDQIVLQFCIKNCCNL
ESVCLENSTFLTEDLNEDSPGPCKWPHRAQHQNELHHSSIYLLCQALKASNCNLKKLSLG
SCGLTAACFGDLAAVLSTSQSLTELDMGANNPGDAGVQLLCEELKQLNCKLQSLRLWSCG
LTETSCRDLAAVLRTSQSLTELDLSDNKLGVSGVRLLCEGLKHPNCKVQRLDLFSGHLPG
ASCEDLAAVLRVNESLTDLDLGYNYLGDAGVQRLCKGLSHPNCKLQRLGLQGCHLTDAGC
VDLAAFLRTNQSLTKLELSDNELGDVGVQLLCEGLKQNCKLQSLSLWKCGVTATGCGDLA
AVLRVSQNLTELQLGENNLGDSGVWLLCEGLKHPNCKLQRLRLKKEYLTEEMRAELDAVK
DTKPDLVIQILDW
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgaagcagcagaaatctcactactcgtatgagaagtgatctgctcatacga
accctcgacaacctttctcaggaagagttcaaaagatttaaagacaaactatcacactct
gactttgaggggaaaggtaacatccctcgaggtcagctggagaatgctgacaggatagac
acaaagaacctcctgatccaattctatggtgaaattgctgcagtagaagtaaccacagat
gttttcactcagatcaacctcagagatgctgctgctaaactcagagaagagagagagaaa
gctttgggtcctcagcaaacatctgaaagatcagcaaatgcttacggcgtgaagtataga
gaacatataaaaaatgaatacagtgcaatgaaagacatgaatgctcgtcttggtgagaat
gtaaagctaaacagcagatatacaaagctgatcattacaaaagaacatcgtcatgaaatg
cagagagaacatgaaataatggccctgggacggagacatgcagagatcatgactgagcac
accactcctatcaccataggcgatttatttgaatctgatgatgatggacagtcaccacaa
attgtcgtgctgcagggagctgcagggattggaaaaacactgacagcaagaaagatcatg
ttggactgggcaaatgaagaactgtatcagagcaggtttgattatgttttctacataaat
tgccgggaaattaactttgacagagagcagagaagtgtggaagatttgattttaagaaat
tgtcctgatcataatgcaccaactaaagagattctgatgactccagaaaaactcctgttc
ataattgatggttttgatgaactgagattttcctttaatcaaccaacaagtaatctgtgc
tcggatccctgtgagaagcagtcagtggacatcatactgagcagtttatttaggaaaaaa
gtgcttctcaaatcttacttactaattactacaagaccaattgccctggagaaacttggg
cggtgtttgaaagatgaacgttatgcagagatcctgggattttctgaaaatgagagaaaa
gaatatttttataaattctttgagaaggaagaacaagcaagcaaagcctttaacgttgta
agagacaacgaaatgctgttcaccatgtgctttgtccccattgcgtgttggatcatctgc
acggttctgaaacagcagatggaagcaggtgaagatcttgcacaaacttccaccacaatc
actggagtctacatgctctatctcttcagtttattagagggtcacagcagcaattcaaag
caacaggtacaatgtaacttgaaggaactttgttccttggctgcagatggaatctggagg
aagaatatactgtttgaggaagaagatgtcaagaaacatggattagataaacctgattcc
ctctttctgaatgagaacgtgtttcaaaaaggcattggctgtgaacgtgtttacagcttc
attcacttgagttttcaggaattttttgcagctttgttttatgtgttggagcaagaagaa
actgtgaagaagtcagcaactgctatacaacctgtggaaaaattgtttgaaaaatgtgga
aaatctaggaattatttaatgttaacagtgcgattcctgtttgggctcttaaataaaaag
agaatggaggagatggagaaaaatcttagctgcaaattttcacccaaagttaaaaataat
ttactaacatgggttaaagaaaaacccttttcgttgttgttcaactatgataaattgcct
tctgataaggagacaatgtttttctatttggattatttttactgtttgtatgaaattgaa
gaaactgaatttgtgcagagtgcaatgaatcatttcactgagctaaaattaactcatcat
acctttaccaaaatggatcaaattgttcttcaattttgtataaagaattgctgtaatctg
gagtcagtttgtctagagaacagtacatttctaactgaagacctgaatgaagattcccca
ggaccatgcaagtggccacatcgggcacaacatcagaatgagctgcatcattcatctatt
tacctgctctgtcaagcactgaaggcttcaaactgtaatttaaaaaaactaagcttgggg
agttgtggtctcacagctgcttgctttggggatctcgccgctgttctcagcaccagccag
agcctgacagagctggacatgggtgctaataatccaggagatgctggagtgcagctgctg
tgcgaggaactgaaacaactgaactgcaaactgcagagtctgcggttgtggagttgtggt
ctcacagagactagctgcagggatcttgccgctgttctcagaaccagccagagcctgaca
gagctggacctgagtgataataaactaggagtttctggagtgcggctgctgtgtgaggga
ctgaaacacccgaactgcaaagtgcagagactggacttgtttagtggtcatctcccaggt
gcttcctgtgaggatctcgccgctgttctcagagtcaatgagagcctgacagatctggac
ctgggttacaattatctgggagatgccggcgtgcagcgtctgtgtaagggactgtcacac
ccgaactgcaaactacagagactgggcttgcagggttgtcatctcacagacgctggctgt
gtggatctcgccgcttttctcagaaccaaccagagtctgacaaagctggagctgagcgat
aatgaactgggagatgttggcgtgcagctgctctgtgagggactgaaacaaaactgtaaa
ttgcagagtctgtcgttgtggaagtgcggtgtcacagccactggctgtggggatcttgct
gctgttctcagagtcagccagaacttgacagagctgcagctgggtgagaataatctggga
gattctggagtgtggctgctgtgtgagggactgaaacacccgaattgcaaactgcagaga
ctgcgcttgaagaaagagtatttaactgaagaaatgagagcagagctggatgctgtgaaa
gacacaaaacctgacctggttatacagatactggactggtga
DBGET
integrated database retrieval system
