Chelonoidis abingdonii (Abingdon island giant tortoise): 116836424
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Entry
116836424 CDS
T07367
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03030
DNA replication
cabi03410
Base excision repair
cabi03420
Nucleotide excision repair
cabi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116836424 (RFC5)
03410 Base excision repair
116836424 (RFC5)
03420 Nucleotide excision repair
116836424 (RFC5)
03430 Mismatch repair
116836424 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cabi03032
]
116836424 (RFC5)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116836424 (RFC5)
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116836424 (RFC5)
DNA replication proteins [BR:
cabi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116836424 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
116836424 (RFC5)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116836424 (RFC5)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116836424 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
116836424 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
DNA_pol3_delta2
AAA
RCF1-5-like_lid
AAA_assoc_2
DEAD
DNAX_ATPase_lid
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
116836424
NCBI-ProteinID:
XP_032655889
Ensembl:
ENSCABG00000001504
UniProt:
A0A8C0G2P5
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVIEKF
TENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIKEEMADVSEDGMKAL
VTLSSGDMRRALNILQSTTMAFGKVTEDTVYTCTGHPLKSDIANILDWMLNQDFSTAYKK
ILELKTLKGLALHDILTEIHLFVHRVDFPPSVRIQLLIKMADIEHRLAAGTSEKIQLSSL
IAAFQVTRDLIVAEA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctgaatgcttcagatgacagaggaattgatgtcgtcagaggacccatc
ctgagctttgctagcacaaggacaatctttaagaaaggttttaagcttgtgatcctggat
gaagcagatgccatgacccaggatgcccagaatgccctaaggcgagtgattgagaaattc
actgagaacaccaggttttgcctgatctgtaactacctctccaagatcatccctgccttg
caatccagatgcacaaggttccgctttggccccctgactccagaactcatggtccccagg
ctgcagcatgtcatcaaggaagagatggctgatgtaagtgaagatgggatgaaagcactg
gtgaccctctccagcggggacatgcgcagagctctgaatattttgcagagcaccaccatg
gcctttgggaaggtgacagaggacaccgtgtacacctgcacagggcaccccctgaagtct
gacattgccaacattctcgactggatgctgaaccaggacttctccactgcctataaaaaa
atcctggagctgaagacactgaagggtttggctctgcatgacatcctgacagagatccac
ttgtttgtgcatcgagttgactttccaccttctgtccgaatccaactcctgatcaaaatg
gcagacatcgagcacagactggctgcaggtacaagcgagaagattcagctaagctccctt
attgctgcttttcaagtcaccagggatttgattgtagctgaggcttag
DBGET
integrated database retrieval system
